Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033204_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:254163170:254168845:1 gene:Zm00001d033204 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:methyl binding domain115 description: methyl binding domain115
Sequence

ATGGCAACCGGCCCGGAGCACGTGGCGGCGGCGGTCGAGGAGACGCCGGAGAAGAAGGCG
GCCAGCACAACCGAGCTCCCCGCACCCTCAGGCTGGACGAAGAAGGTTGCTCCAACTCGA
GGTGGACGATTTGAGGTTATTTTTGTTTCCCCAACTGGTGAGGAAGTTAAGAGCAAGAGA
CAGCTAACCCAGTACCTGAAAGCTCATCCTGGAGGCCCTGCATCCTCAGAGTTCGATTGG
GGAACCAGTGATACTCCCAGACGCTCAGCACGCTTGAGCGAGAAGGTCAAGGCAACTGAG
AGCCCAGAGGGTGAGAAGACCCCTAAACGGGGAAGATCAAGTTCTAAGAGAGGCAAAAAG
GAGGAAAAAGAAGACACAGAGGCTGCAAATGAGGCTGGAGAAGATGGTGCTTCGGAGGAA
GGTAAAGGTACAGATGTGGAGATGAAAGATGCTGAAAACGCTGAAGACGAGAAGAAAGAG
GTCCCAAATGCAGATGCTGCAGAGAAGACTGAGGAAGGTGAAGATAAGAAAGAGGAGGCC
CCTGCTGTAGATGCAGCAGAGAAGACTGAGGAAGGTGAAGATAAGAGAGAGGAGGAGGCC
CCTGCTGTAGATGCAGCAGAGAAGACTGGTGAGAAAGAGGTGGCCCCTGCTGTAGATGCA
ACAGAGGAGACAGAAAAAAGCACCGAAGGCCAAGCACAGCCTAATTATGTTGCTGCCCCA
GAATCTGAGTATAAAGGAGACGGAAAGCCAGGTGAATCCGAAGCAGCTCCCCTTGCATTT
GTTGATGAAACAGCTCCCCATGTAATTATTGGTGAAGAGAAGAAAGAGGAAAATACTGAG
AATGAGAACAGTCAGGCAGCCGAATCTGCCGTGCCTTCCCTGGCATCTTTAGAGGGAGAG
AAGAAAGAGAATGGTGGTGCCCCTGAACAACCAGCCCTGCCTGTAGCTGAGACGAAGGCA
GATGCTCCTCCGGCAGAGGCAGAAAAGGGGGCTGAAAATTCAGGCCAGCCGAATACCGGC
TCTCAAGAACCGAAGGCAGCAAACTGCGACGAGGGGCAGATTCAACCTGGTGCCTCTGCT
GTGAGGTGCACATAA

Peptide Sequence

PEP ID

Zm00001d033204_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:254163170:254168845:1 gene:Zm00001d033204 transcript:Zm00001d033204_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:methyl binding domain115 description: methyl binding domain115
Sequence

MATGPEHVAAAVEETPEKKAASTTELPAPSGWTKKVAPTRGGRFEVIFVSPTGEEVKSKR
QLTQYLKAHPGGPASSEFDWGTSDTPRRSARLSEKVKATESPEGEKTPKRGRSSSKRGKK
EEKEDTEAANEAGEDGASEEGKGTDVEMKDAENAEDEKKEVPNADAAEKTEEGEDKKEEA
PAVDAAEKTEEGEDKREEEAPAVDAAEKTGEKEVAPAVDATEETEKSTEGQAQPNYVAAP
ESEYKGDGKPGESEAAPLAFVDETAPHVIIGEEKKEENTENENSQAAESAVPSLASLEGE
KKENGGAPEQPALPVAETKADAPPAEAEKGAENSGQPNTGSQEPKAANCDEGQIQPGASA
VRCT

Transcript Sequence

Transcript ID

Zm00001d033204_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:254163170:254168845:1 gene:Zm00001d033204 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:methyl binding domain115 description: methyl binding domain115
Sequence

CCGAGCCCCTACGTTCCAAGTCCAACCAACCCATTCCCCAATTCAGTATCAGGCCTTTGC
GAATTGCGACAGCGAGAGCGGGAAGAGGAAACTCGAAACTCGGCGAGCGGGATGGCAACC
GGCCCGGAGCACGTGGCGGCGGCGGTCGAGGAGACGCCGGAGAAGAAGGCGGCCAGCACA
ACCGAGCTCCCCGCACCCTCAGGCTGGACGAAGAAGGTTGCTCCAACTCGAGGTGGACGA
TTTGAGGTTATTTTTGTTTCCCCAACTGGTGAGGAAGTTAAGAGCAAGAGACAGCTAACC
CAGTACCTGAAAGCTCATCCTGGAGGCCCTGCATCCTCAGAGTTCGATTGGGGAACCAGT
GATACTCCCAGACGCTCAGCACGCTTGAGCGAGAAGGTCAAGGCAACTGAGAGCCCAGAG
GGTGAGAAGACCCCTAAACGGGGAAGATCAAGTTCTAAGAGAGGCAAAAAGGAGGAAAAA
GAAGACACAGAGGCTGCAAATGAGGCTGGAGAAGATGGTGCTTCGGAGGAAGGTAAAGGT
ACAGATGTGGAGATGAAAGATGCTGAAAACGCTGAAGACGAGAAGAAAGAGGTCCCAAAT
GCAGATGCTGCAGAGAAGACTGAGGAAGGTGAAGATAAGAAAGAGGAGGCCCCTGCTGTA
GATGCAGCAGAGAAGACTGAGGAAGGTGAAGATAAGAGAGAGGAGGAGGCCCCTGCTGTA
GATGCAGCAGAGAAGACTGGTGAGAAAGAGGTGGCCCCTGCTGTAGATGCAACAGAGGAG
ACAGAAAAAAGCACCGAAGGCCAAGCACAGCCTAATTATGTTGCTGCCCCAGAATCTGAG
TATAAAGGAGACGGAAAGCCAGGTGAATCCGAAGCAGCTCCCCTTGCATTTGTTGATGAA
ACAGCTCCCCATGTAATTATTGGTGAAGAGAAGAAAGAGGAAAATACTGAGAATGAGAAC
AGTCAGGCAGCCGAATCTGCCGTGCCTTCCCTGGCATCTTTAGAGGGAGAGAAGAAAGAG
AATGGTGGTGCCCCTGAACAACCAGCCCTGCCTGTAGCTGAGACGAAGGCAGATGCTCCT
CCGGCAGAGGCAGAAAAGGGGGCTGAAAATTCAGGCCAGCCGAATACCGGCTCTCAAGAA
CCGAAGGCAGCAAACTGCGACGAGGGGCAGATTCAACCTGGTGCCTCTGCTGTGAGGTGC
ACATAAGGGAGCTTGATCTCAGATGGGACTCTGTTGCGTTATGTCTTTAGGACGATACCT
CGCATTTGCTTTGAGAATTGTAATCGTGGTTAACCTGACAGCGCTGTGTAGCACTAGGCT
GCCCAGCACGTAGTTATCCTTTCGTTTCTTTTATAACGGTGGTGTTGCAGCATGGGTAAT
GGGCCGGCCTGTGCTGCCTCAGCCACCACTGCATACCCAGTGTAAGTGTAACTCGTTATT
AGCGTGGTCGACATTGATCTGTGGAGAGGACTGCAGGACAGTACTGTCCTCGACAGCTGT
AACGTTACGTTTTGTGTGTTCCCTTGTGTTATTGAACTTATATTATGATCCATAAATAAA
GCCATAAGCGTGGCAGGGTCATTCCCTGACCACCTTCAGGCATC