Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033170_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:252782346:252784928:1 gene:Zm00001d033170 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase RHB1A
Sequence

ATGGGGTCCCTGCTTTGCTGCATGGGGTGCTCGGAGGACGTCTCGGCAGCGCCGCCCGTG
AGCTGCTTGTGCCTACTATGGCCTTTCCATTATTACCACAATTTGAACTCGGGCTCTGCT
GCTTGTCACAGATGTGATACACGGGTGGCACCTGATGGTGGAAGGAGTCCTCCTGCAAAT
CAAGTGGATTCATTGGATACTTTGGGTCTCCCTCCAAGGCCTTTGCCTTACGATGATCCT
CAATCCAGCCCTCGCATGGTGCAACACCCACTTGTATCAGGACACGACAAAGCACCAACG
CATGTCCAGAAACTAGGACAGCCTGCAGAAACTAAGAATACCCATACTGGGTCAACTTGC
ACAGCTCATAAGGTTTCTGCGTCCTCACCAAAACAGCACTCAGAAGGTTCAAGAATGGAT
GATGGAGTACAATTCTGTGATTCCTCTGACAGTGAGGATGACTGTCCAGTATGCCTGGAA
GAATATGATTATGAGAATCCGAAGATTGCACTGCAATGCAAACATAATTTCCACCTTAGC
TGCATTTACGAGTGGATGGAAAGGAGCCAGGCTTGCCCGGTCTGTGCAAAGACTATGTTG
TTCAATGAGGATGAATGA

Peptide Sequence

PEP ID

Zm00001d033170_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:252782346:252784928:1 gene:Zm00001d033170 transcript:Zm00001d033170_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase RHB1A
Sequence

MGSLLCCMGCSEDVSAAPPVSCLCLLWPFHYYHNLNSGSAACHRCDTRVAPDGGRSPPAN
QVDSLDTLGLPPRPLPYDDPQSSPRMVQHPLVSGHDKAPTHVQKLGQPAETKNTHTGSTC
TAHKVSASSPKQHSEGSRMDDGVQFCDSSDSEDDCPVCLEEYDYENPKIALQCKHNFHLS
CIYEWMERSQACPVCAKTMLFNEDE

Transcript Sequence

Transcript ID

Zm00001d033170_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:252782346:252784928:1 gene:Zm00001d033170 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase RHB1A
Sequence

AGGACTCCGACTCGTTCGGGCTATTCCATCTCTGCTCTCTCCCTATATACGACTAGGCTA
CCGCCGCCGCCAGATGCGCAGGTCTTCGTCGGCTCCTTCTACTTCTCAGGCAACGAGCAC
CCGGCAGTACCGATCGGGTGTTCTTCACTGGGTCCGCTCCTGCGTGCTAGAACTAGAAGA
ATCCTCTGCTCGGCTCGAACTTGGAAGGGGGGAGGCGAGGGATGGGGTCCCTGCTTTGCT
GCATGGGGTGCTCGGAGGACGTCTCGGCAGCGCCGCCCGTGAGCTGCTTGTGCCTACTAT
GGCCTTTCCATTATTACCACAATTTGAACTCGGGCTCTGCTGCTTGTCACAGATGTGATA
CACGGGTGGCACCTGATGGTGGAAGGAGTCCTCCTGCAAATCAAGTGGATTCATTGGATA
CTTTGGGTCTCCCTCCAAGGCCTTTGCCTTACGATGATCCTCAATCCAGCCCTCGCATGG
TGCAACACCCACTTGTATCAGGACACGACAAAGCACCAACGCATGTCCAGAAACTAGGAC
AGCCTGCAGAAACTAAGAATACCCATACTGGGTCAACTTGCACAGCTCATAAGGTTTCTG
CGTCCTCACCAAAACAGCACTCAGAAGGTTCAAGAATGGATGATGGAGTACAATTCTGTG
ATTCCTCTGACAGTGAGGATGACTGTCCAGTATGCCTGGAAGAATATGATTATGAGAATC
CGAAGATTGCACTGCAATGCAAACATAATTTCCACCTTAGCTGCATTTACGAGTGGATGG
AAAGGAGCCAGGCTTGCCCGGTCTGTGCAAAGACTATGTTGTTCAATGAGGATGAATGAC
CCCGCCGATGGAAGTCTTCCCAGACGGCAAGTGGAAGACCCAAGCTAAATCCTGCGTGTT
GTGTACATAGCGCTGATCGTTTGCTGAAACTTACAGCATTGCGAAAATTTATTTTTATAG
ATTTTTTCTTGATGTTAATGTCCGCAGGGGTGCTTACAATAGGTTTTCATGCTGAAATCT
CAGGTTCTGAAAACCACAGCTTTCGGTTGAAATC