Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033158_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:1:252438636:252443384:1 gene:Zm00001d033158 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JUMONJI-transcription factor 22 description:Transcription factor jumonji (jmjC) domain-containing protein
Sequence

ATGTTGACTGGGGATAATGCCCTGATGTGCCACCAGTGCCAGAGGAATGATAAAGGGAGG
GTGGTCTGGTGTAATTCATGCAGAAATAAGCGCTTCTGTGTGCCATGCATTGAAAGATGG
TATCCTAACTTGTCAGAAGACGAATTTGCTGCAAAATGCCCATATTGTCGCAAGAACTGT
AATTGCAAAGGATGCCTTAGAATGAGAGGGGTTGAAGAGCCTCCAAAGAAGGAAATTTCT
GAAGAAAATCAAATCTCTTATGCTTGCAATGTTGTGCGCTTGTTGCTTCCCTGGTTGAGA
AAACTGCGACAGGAGCAGATGGAGGAGAAGAAATTGGAGGCTAAAATAAAAGGTGTTTTG
GTGAATGAGATGAAGTTGGAACAAGCTGAATATAATCTAGATGAGCGTGTCTACTGCAAT
AATTGCAAAACTTCTATAGTTGATTTTCACAGAAGCTGCAAGTACTGCTTTTATGATCTG
TGCCTTGACTGCTGTGTGGAGATCCGCAGAGGTGAGATTCCTGGAGGAGAAGAGATAATG
AGAGTAAAGCCTGAAGATAGAGGCCGAGCATATCTTTTTGGTACTACTAACTCAAAGGAT
GGGAGTAAAAGGTTCTCCATGAGGAGGCACAGCTCATCCCTGGAGAATGAGCCTTCCAAT
GTAGTAGGTTCTAGTGAGGGGGCAAATAACTCTCTGGAGCTGTGGAAAGCAGAAAGTGAT
GGTAGCATACCTTGCCCACCAAAGGAGCTAGGAGGCTGTGGCGGTTCGATTTTGGATCTC
AAGTGTTTTTTTCCAGAAAAGATGCTTTCAAATTTAGAAGAACGAGCTGACAGAATTATG
AGGAGCGAAGTATTTGCAAAAGCAGTAGCCAAAAGAAGTGACCAGTGCCCTTGTTATGAC
CATTCAGGAAACATAAGAACTCAGGACGTGCGAGAGACTGCAAATACGAAAGGCTCAAGT
GATAACCATCTCTACTGCCCAGTTGCCACTGCTATCAAGGAGGATGACTTGGCGCACTTT
CAGATGCACTGGACAAAAGGCGAACCAGTTATTGTTTCTGATGTTCTGCATTTGACTTCT
GGTCTAAGTTGGGAACCATTAGTTATGTGGCGGGCATTGCGAGAGAAAAAGACTAATGGT
GACGTAGAAGATGAGCACTTTGCTGTCAGGGCATTAGATTGCCTTGATTGGTGTGAGGTG
GAAATTAACATACACATGTTTTTTGTGGGATATATGAAAGGCAGAACGCATCACATGACA
CACTGGCCTGAGATGCTTAAGCTAAAGGACTGGCCGCCATCTAGTTCTTTTGATCAGAGA
TTGCCTCGCCATGGTGCTGAGTTTATCAGTGCATTGCCATTTCCTGAGTACACTGATCCT
CGATATGGTCCGCTGAATCTTACAGTCAAGCTACCTGATGGTGCATTGAAGCCAGATCTT
GGACCAAAAACTTACATCGCTTATGGATTTTACCAAGAGTTAGGCAGGGGTGATTCTGTG
ACCAAGCTTCACTGTGACATGTCTGATGCGGTAAATATATTGACACACACAGCACAAGTG
CCCTATGCGCGTTATCAACTTGAGAAGATAGAGGAAACCAGAAAGAAAATGAAAGAACAA
GATCTTCAGGAACTTTATGGTGTTTCAGAACTAAACCTATCATCACCTTTTACTGATTCC
AGGAATATAAGTGCTGATGAAATGTCAAAGACCTCATGTAACTATGGTTTGGACGTCAAT
GATGTACCACCTGTTAATAATGAATCTGAGGTACAAAGTGGGGCAGGCCAGTGTTCAGAT
TACATTGACAAGGATAGAAGTTATGCTGGGATGCATAACGGGGAGAGAACCGGTGGTGCC
TTATGGGATATTTTCCGAAGAGAAGATTCTGACAAGATACAAGATTATCTTAGGAAACAT
GCCACGGAATTCCGGCACATCTTTTGCAATCCTGTGAAGCAGGTTATTCACCCAATTCAC
GATCAGACTTTCTACTTAACCGAGGAGCATAAGAGAAAGCTCAAGGAAGAATATGGTGTT
GAACCCTGGACGTTTGAGCAGAAGCTTGGTGAAGCGGTTTTCATTCCTGCTGGATGTCCT
CACCAAGTGAGGAACTTGAAGTCTTGCATTAAGGTTGCGATGGACTTTGTCTCCCCAGAA
AGCGTCAACGAGTGCATGAAACTGACTGGAGAGTTTAGGCGGCTTCCACCTGATCACAGG
GCTAAAGAGGATAAGCTGGAGATCAAGAAGATTGCTCTTCATGCTCTGAACCAAGTAGTA
AATTTCTTGGATCCTTCCTCGGAGTGGTCGAAGAGTTGGTTTGCCCAACTCAAGAACAAA
AAAAAGGCTGGAGCTGAAGAACAGGAGAAGCCTAAAAGGAAGCGTGGCCGCCCATGTCGC
AAGTCCAACGATGAAGCTGCTGGCGATAGGCACAGAAAGAAGGGCGGCCGCCAAAGAGGT
CGGAAGAGGGGATACGGCAAGTCCAAAGATGGCGCTGGCGCTGTTGATGTGAAGCCTCCT
AAAAGGCAGCGCAATCTCCTGAAAGGCTCTGGCAATCGTGTAGGTGGTTGA

Peptide Sequence

PEP ID

Zm00001d033158_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:1:252438636:252443384:1 gene:Zm00001d033158 transcript:Zm00001d033158_T011 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JUMONJI-transcription factor 22 description:Transcription factor jumonji (jmjC) domain-containing protein
Sequence

MLTGDNALMCHQCQRNDKGRVVWCNSCRNKRFCVPCIERWYPNLSEDEFAAKCPYCRKNC
NCKGCLRMRGVEEPPKKEISEENQISYACNVVRLLLPWLRKLRQEQMEEKKLEAKIKGVL
VNEMKLEQAEYNLDERVYCNNCKTSIVDFHRSCKYCFYDLCLDCCVEIRRGEIPGGEEIM
RVKPEDRGRAYLFGTTNSKDGSKRFSMRRHSSSLENEPSNVVGSSEGANNSLELWKAESD
GSIPCPPKELGGCGGSILDLKCFFPEKMLSNLEERADRIMRSEVFAKAVAKRSDQCPCYD
HSGNIRTQDVRETANTKGSSDNHLYCPVATAIKEDDLAHFQMHWTKGEPVIVSDVLHLTS
GLSWEPLVMWRALREKKTNGDVEDEHFAVRALDCLDWCEVEINIHMFFVGYMKGRTHHMT
HWPEMLKLKDWPPSSSFDQRLPRHGAEFISALPFPEYTDPRYGPLNLTVKLPDGALKPDL
GPKTYIAYGFYQELGRGDSVTKLHCDMSDAVNILTHTAQVPYARYQLEKIEETRKKMKEQ
DLQELYGVSELNLSSPFTDSRNISADEMSKTSCNYGLDVNDVPPVNNESEVQSGAGQCSD
YIDKDRSYAGMHNGERTGGALWDIFRREDSDKIQDYLRKHATEFRHIFCNPVKQVIHPIH
DQTFYLTEEHKRKLKEEYGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCIKVAMDFVSPE
SVNECMKLTGEFRRLPPDHRAKEDKLEIKKIALHALNQVVNFLDPSSEWSKSWFAQLKNK
KKAGAEEQEKPKRKRGRPCRKSNDEAAGDRHRKKGGRQRGRKRGYGKSKDGAGAVDVKPP
KRQRNLLKGSGNRVGG

Transcript Sequence

Transcript ID

Zm00001d033158_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:252438636:252443384:1 gene:Zm00001d033158 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JUMONJI-transcription factor 22 description:Transcription factor jumonji (jmjC) domain-containing protein
Sequence

GAAAAGGAAGATGTTGACTGGGGATAATGCCCTGATGTGCCACCAGTGCCAGAGGAATGA
TAAAGGGAGGGTGGTCTGGTGTAATTCATGCAGAAATAAGCGCTTCTGTGTGCCATGCAT
TGAAAGATGGTATCCTAACTTGTCAGAAGACGAATTTGCTGCAAAATGCCCATATTGTCG
CAAGAACTGTAATTGCAAAGGATGCCTTAGAATGAGAGGGGTTGAAGAGCCTCCAAAGAA
GGAAATTTCTGAAGAAAATCAAATCTCTTATGCTTGCAATGTTGTGCGCTTGTTGCTTCC
CTGGTTGAGAAAACTGCGACAGGAGCAGATGGAGGAGAAGAAATTGGAGGCTAAAATAAA
AGGTGTTTTGGTGAATGAGATGAAGTTGGAACAAGCTGAATATAATCTAGATGAGCGTGT
CTACTGCAATAATTGCAAAACTTCTATAGTTGATTTTCACAGAAGCTGCAAGTACTGCTT
TTATGATCTGTGCCTTGACTGCTGTGTGGAGATCCGCAGAGGTGAGATTCCTGGAGGAGA
AGAGATAATGAGAGTAAAGCCTGAAGATAGAGGCCGAGCATATCTTTTTGGTACTACTAA
CTCAAAGGATGGGAGTAAAAGGTTCTCCATGAGGAGGCACAGCTCATCCCTGGAGAATGA
GCCTTCCAATGTAGTAGGTTCTAGTGAGGGGGCAAATAACTCTCTGGAGCTGTGGAAAGC
AGAAAGTGATGGTAGCATACCTTGCCCACCAAAGGAGCTAGGAGGCTGTGGCGGTTCGAT
TTTGGATCTCAAGTGTTTTTTTCCAGAAAAGATGCTTTCAAATTTAGAAGAACGAGCTGA
CAGAATTATGAGGAGCGAAGTATTTGCAAAAGCAGTAGCCAAAAGAAGTGACCAGTGCCC
TTGTTATGACCATTCAGGAAACATAAGAACTCAGGACGTGCGAGAGACTGCAAATACGAA
AGGCTCAAGTGATAACCATCTCTACTGCCCAGTTGCCACTGCTATCAAGGAGGATGACTT
GGCGCACTTTCAGATGCACTGGACAAAAGGCGAACCAGTTATTGTTTCTGATGTTCTGCA
TTTGACTTCTGGTCTAAGTTGGGAACCATTAGTTATGTGGCGGGCATTGCGAGAGAAAAA
GACTAATGGTGACGTAGAAGATGAGCACTTTGCTGTCAGGGCATTAGATTGCCTTGATTG
GTGTGAGGTGGAAATTAACATACACATGTTTTTTGTGGGATATATGAAAGGCAGAACGCA
TCACATGACACACTGGCCTGAGATGCTTAAGCTAAAGGACTGGCCGCCATCTAGTTCTTT
TGATCAGAGATTGCCTCGCCATGGTGCTGAGTTTATCAGTGCATTGCCATTTCCTGAGTA
CACTGATCCTCGATATGGTCCGCTGAATCTTACAGTCAAGCTACCTGATGGTGCATTGAA
GCCAGATCTTGGACCAAAAACTTACATCGCTTATGGATTTTACCAAGAGTTAGGCAGGGG
TGATTCTGTGACCAAGCTTCACTGTGACATGTCTGATGCGGTAAATATATTGACACACAC
AGCACAAGTGCCCTATGCGCGTTATCAACTTGAGAAGATAGAGGAAACCAGAAAGAAAAT
GAAAGAACAAGATCTTCAGGAACTTTATGGTGTTTCAGAACTAAACCTATCATCACCTTT
TACTGATTCCAGGAATATAAGTGCTGATGAAATGTCAAAGACCTCATGTAACTATGGTTT
GGACGTCAATGATGTACCACCTGTTAATAATGAATCTGAGGTACAAAGTGGGGCAGGCCA
GTGTTCAGATTACATTGACAAGGATAGAAGTTATGCTGGGATGCATAACGGGGAGAGAAC
CGGTGGTGCCTTATGGGATATTTTCCGAAGAGAAGATTCTGACAAGATACAAGATTATCT
TAGGAAACATGCCACGGAATTCCGGCACATCTTTTGCAATCCTGTGAAGCAGGTTATTCA
CCCAATTCACGATCAGACTTTCTACTTAACCGAGGAGCATAAGAGAAAGCTCAAGGAAGA
ATATGGTGTTGAACCCTGGACGTTTGAGCAGAAGCTTGGTGAAGCGGTTTTCATTCCTGC
TGGATGTCCTCACCAAGTGAGGAACTTGAAGTCTTGCATTAAGGTTGCGATGGACTTTGT
CTCCCCAGAAAGCGTCAACGAGTGCATGAAACTGACTGGAGAGTTTAGGCGGCTTCCACC
TGATCACAGGGCTAAAGAGGATAAGCTGGAGATCAAGAAGATTGCTCTTCATGCTCTGAA
CCAAGTAGTAAATTTCTTGGATCCTTCCTCGGAGTGGTCGAAGAGTTGGTTTGCCCAACT
CAAGAACAAAAAAAAGGCTGGAGCTGAAGAACAGGAGAAGCCTAAAAGGAAGCGTGGCCG
CCCATGTCGCAAGTCCAACGATGAAGCTGCTGGCGATAGGCACAGAAAGAAGGGCGGCCG
CCAAAGAGGTCGGAAGAGGGGATACGGCAAGTCCAAAGATGGCGCTGGCGCTGTTGATGT
GAAGCCTCCTAAAAGGCAGCGCAATCTCCTGAAAGGCTCTGGCAATCGTGTAGGTGGTTG
ATTGTTTCACTGCTGACTGGGAAGATGGAAGGCGTAAGGGCTGTACCGACCCAACCTTGA
CGTGGTTATTTTGGTACCAGGTTGTAAGTGTAGACTCTAGATTGTAGAATAGACCAGGCA
TTTCGTCACCCCTGGGCGCCATTATGGCGTCTTGCTTTTGTTCATATGTGGCGATTGCCG
GTTGACACCGTTTTGGAAGAATAATATGCTAGATGCTCGTTGTACCAGACTCTTCATGTA
GCGGGCTATGGTGAATTGCTGTTCAGCATGTCTGATGCTGATGTTGGTAATTGACC