Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033112_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:1:250446609:250450073:-1 gene:Zm00001d033112 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:kinesin-related protein13 description: kinesin-related protein13
Sequence

ATGAACTTAAAAAGTTCCCGCTCTCATGTGATATTCACCTGCGTTATTGAAGCATGGAGC
AAGGTACATGCTATTTTTTTTATTTTGCTAGTTCTCTGTTCTTTGTTGCATATTGTAGTA
GCTGTCAGCCTTTCTAAATCTCAGGATTTCACCTTTGTTCTGTCTTATTATAATAAATAT
ATCACATGTTTATGGGATGTACATCTGCTTAATTATCTTTTGGATTTACTTCTTCAATTA
ACATTACAGGGTTCATCAAATGGGTTTAGCAGCTCAAGAACTAGCAGAATCACCTTTGTT
GACCTCGCTGGTCCTGACACTGATGAACTTGGTGCAGCAAAGCATTCCACAAAGGAAGAA
AGACATCTTAAGAAGTCTCTTTCAAGGCTTGGGAAACTAGTTAACGTTCTTTCAGAAACT
CCAGAGTCACATAAAGTTGATTTACCATATGAGCAATCCCGTTTGACACATGTGCTGAAG
GATACACTAGGTGGCAACTCCAGGGTTATATTTTTGTGTTCGATTTCTTCAGAGCACAGA
TGCAGATCTGGAACTTTAAGTACACTAAGATTTGGTGAGCGAGCAAAGCTAATGCCAAAC
AAACCTGTGATAAATGAGATATCAGAAGATGATGTTAATGGTTTGAGCGATCAGATACGT
CAGTTAAAGGATGAACTCATAAGAACAAAGTCTGGAGACACCACAACTTGCAAGGCTAGG
TACTTCAGTGCACAAAGTGCCCGTGAAAGTTTGCATACTTTGCGAGTGAGCCTCAACCGC
TCTCTTATCTTTCCTCACATAGAAGTTGATTCAGAGGAAGAAATGGATGTTGATGAAGAA
GATGTGCAAGAACTGCGTGATCAAATTAGCAAGATTCACTCTTCATCTGAAGATACATTG
GATGACTTTATGGATGCAGAAAGTGGAGACGAAAGCACTCCTTGTTCTGTGGGAAGAAGT
GAAGATGATCAAGTAATCATAGATGATTTTGAAGGTCCACAACAGGAAGAGCAAAAAGAA
GTATCTAACAATACAAATGCTAATGAAGACCTCGGTTCTGACAGAAAATCTAATCTATCA
ATTATTGCCTCCACACGGTTATCACCTATTCAGGATCCAACATTGTGCTCTTCTCCAAAG
ATCCACAACAAGGCAAGAATGAGCATCACTTCACTGGGGCTATCACCAAGCAAGATTAGA
ATATCAGACAGCCCAGGTGATAGAAATGTTGAAATGTGTACAAATAGTGCATTTCGTTCC
TCTCTACAATCAAGCAAGCTTAGCCCCACTGACTCACTGGCTGCAAGTCTTCAACGTGGC
TTGCACATTATAGAGTACCATCAACAGAATCCAGCCCCAAGAAAATCATTTATTGGTCTT
TCATTTGACCATTTCGCTCGTCAGTCAGTAGCAAAAATCAGTTCAGCTGTTCAGGCTCTA
CCAGAGGACCAAGGAAACAACCTTTGTTCATTCTGCAAGAAGCCAATGAACACAAATGAT
AATCAGACAGAAAACGTAAATTTAGACAAACAGATTAAGGATGGCAACATAACTAAGGAA
ATTGCTTCCAAGAGAGAAACTGAGCTTGAAGCTTTATGCGAAGAACAAAGAGCAAAGATC
CAGGAGCTGAGCAGTTTGATTGACCAATATAAGAACAGGTCAGAAGAACTAACTAGTGAA
GGCAAGGTTTCTGTCTCACTCAGTGTGAATGAGAGGGAGGTACTTCTTGCTGAAATCCAG
AGTCTGAGGGAGCAACTCAAAAACCAGACTACTGTATCAACTACTGGTAGCCTTCTTGAC
CAGTTAAGGAACGGCAGCACAGACCAGGAGTATGAACTTGACAAAGAAAGGCAGAAATGG
ATGGAGTCTGAGAGCAAGTGGATTTCACTTACCGAAGAGTTGAGGGTCGATCTAGAATCA
AACAGGATGCACGCAGAGAAGACCGAGATGGAGCTCTGCAACGAGAAGAAGTGCACAGCA
GAGCTAGATGACGCTCTTCAACGAGCGATGTACGGCCACGCCAGGATGGTTGAGCATTAT
GTTGAGCTGCAGGAGCTGTATAATGATCTTCTCGAGAAGCACCGCCGAGTGATGGAGGCG
ATCTCTGAGGTGAAGAGGGCGGCTGCCAGAGCAGGCAGGAAGGGCTGTGGGACGGCCTTC
GCTGCTGCCCTCGCCGCCGAGCTCTCCACGGTGAGAATCGACCGAGAAAAGGAGAGGGCT
CAGCTGAAAGAACAAAACAGAAGGCTCCGCATTCAGCTGCGAGACACTGCCGAAGCTGTT
CATGCTGCTGGAGAACTGCTCGTCAGATTGAGAGAAACCGAGGAAGCATCTACACTAGAA
AAGGAGAGGACTGCCGCGTTGTTGCAAGAGAACGAGAAGCTGAAGAAGCAGCTGGAGAAG
CTGAGGAAGAAGCACGAGATGGAGCTGGAGACGATGAAGGTGCACCTTGCGGAGAGCCGG
CTGCCGGAGTCGGCTTTGGGTGCCTTCTACCACCACGAGAACGAGAGGACGCCGGACGAC
GATCTGTCCTGGCGGGCCGCCTTCGCTTCTGCGTACAGTGACTGA

Peptide Sequence

PEP ID

Zm00001d033112_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:1:250446609:250450073:-1 gene:Zm00001d033112 transcript:Zm00001d033112_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:kinesin-related protein13 description: kinesin-related protein13
Sequence

MNLKSSRSHVIFTCVIEAWSKVHAIFFILLVLCSLLHIVVAVSLSKSQDFTFVLSYYNKY
ITCLWDVHLLNYLLDLLLQLTLQGSSNGFSSSRTSRITFVDLAGPDTDELGAAKHSTKEE
RHLKKSLSRLGKLVNVLSETPESHKVDLPYEQSRLTHVLKDTLGGNSRVIFLCSISSEHR
CRSGTLSTLRFGERAKLMPNKPVINEISEDDVNGLSDQIRQLKDELIRTKSGDTTTCKAR
YFSAQSARESLHTLRVSLNRSLIFPHIEVDSEEEMDVDEEDVQELRDQISKIHSSSEDTL
DDFMDAESGDESTPCSVGRSEDDQVIIDDFEGPQQEEQKEVSNNTNANEDLGSDRKSNLS
IIASTRLSPIQDPTLCSSPKIHNKARMSITSLGLSPSKIRISDSPGDRNVEMCTNSAFRS
SLQSSKLSPTDSLAASLQRGLHIIEYHQQNPAPRKSFIGLSFDHFARQSVAKISSAVQAL
PEDQGNNLCSFCKKPMNTNDNQTENVNLDKQIKDGNITKEIASKRETELEALCEEQRAKI
QELSSLIDQYKNRSEELTSEGKVSVSLSVNEREVLLAEIQSLREQLKNQTTVSTTGSLLD
QLRNGSTDQEYELDKERQKWMESESKWISLTEELRVDLESNRMHAEKTEMELCNEKKCTA
ELDDALQRAMYGHARMVEHYVELQELYNDLLEKHRRVMEAISEVKRAAARAGRKGCGTAF
AAALAAELSTVRIDREKERAQLKEQNRRLRIQLRDTAEAVHAAGELLVRLRETEEASTLE
KERTAALLQENEKLKKQLEKLRKKHEMELETMKVHLAESRLPESALGAFYHHENERTPDD
DLSWRAAFASAYSD

Transcript Sequence

Transcript ID

Zm00001d033112_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:250446609:250450073:-1 gene:Zm00001d033112 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:kinesin-related protein13 description: kinesin-related protein13
Sequence

AGTTAATTTTTCTTTACAGGGACTGTCAAACAGAAAAGTTGGTACCACCAGTATGAACTT
AAAAAGTTCCCGCTCTCATGTGATATTCACCTGCGTTATTGAAGCATGGAGCAAGGTACA
TGCTATTTTTTTTATTTTGCTAGTTCTCTGTTCTTTGTTGCATATTGTAGTAGCTGTCAG
CCTTTCTAAATCTCAGGATTTCACCTTTGTTCTGTCTTATTATAATAAATATATCACATG
TTTATGGGATGTACATCTGCTTAATTATCTTTTGGATTTACTTCTTCAATTAACATTACA
GGGTTCATCAAATGGGTTTAGCAGCTCAAGAACTAGCAGAATCACCTTTGTTGACCTCGC
TGGTCCTGACACTGATGAACTTGGTGCAGCAAAGCATTCCACAAAGGAAGAAAGACATCT
TAAGAAGTCTCTTTCAAGGCTTGGGAAACTAGTTAACGTTCTTTCAGAAACTCCAGAGTC
ACATAAAGTTGATTTACCATATGAGCAATCCCGTTTGACACATGTGCTGAAGGATACACT
AGGTGGCAACTCCAGGGTTATATTTTTGTGTTCGATTTCTTCAGAGCACAGATGCAGATC
TGGAACTTTAAGTACACTAAGATTTGGTGAGCGAGCAAAGCTAATGCCAAACAAACCTGT
GATAAATGAGATATCAGAAGATGATGTTAATGGTTTGAGCGATCAGATACGTCAGTTAAA
GGATGAACTCATAAGAACAAAGTCTGGAGACACCACAACTTGCAAGGCTAGGTACTTCAG
TGCACAAAGTGCCCGTGAAAGTTTGCATACTTTGCGAGTGAGCCTCAACCGCTCTCTTAT
CTTTCCTCACATAGAAGTTGATTCAGAGGAAGAAATGGATGTTGATGAAGAAGATGTGCA
AGAACTGCGTGATCAAATTAGCAAGATTCACTCTTCATCTGAAGATACATTGGATGACTT
TATGGATGCAGAAAGTGGAGACGAAAGCACTCCTTGTTCTGTGGGAAGAAGTGAAGATGA
TCAAGTAATCATAGATGATTTTGAAGGTCCACAACAGGAAGAGCAAAAAGAAGTATCTAA
CAATACAAATGCTAATGAAGACCTCGGTTCTGACAGAAAATCTAATCTATCAATTATTGC
CTCCACACGGTTATCACCTATTCAGGATCCAACATTGTGCTCTTCTCCAAAGATCCACAA
CAAGGCAAGAATGAGCATCACTTCACTGGGGCTATCACCAAGCAAGATTAGAATATCAGA
CAGCCCAGGTGATAGAAATGTTGAAATGTGTACAAATAGTGCATTTCGTTCCTCTCTACA
ATCAAGCAAGCTTAGCCCCACTGACTCACTGGCTGCAAGTCTTCAACGTGGCTTGCACAT
TATAGAGTACCATCAACAGAATCCAGCCCCAAGAAAATCATTTATTGGTCTTTCATTTGA
CCATTTCGCTCGTCAGTCAGTAGCAAAAATCAGTTCAGCTGTTCAGGCTCTACCAGAGGA
CCAAGGAAACAACCTTTGTTCATTCTGCAAGAAGCCAATGAACACAAATGATAATCAGAC
AGAAAACGTAAATTTAGACAAACAGATTAAGGATGGCAACATAACTAAGGAAATTGCTTC
CAAGAGAGAAACTGAGCTTGAAGCTTTATGCGAAGAACAAAGAGCAAAGATCCAGGAGCT
GAGCAGTTTGATTGACCAATATAAGAACAGGTCAGAAGAACTAACTAGTGAAGGCAAGGT
TTCTGTCTCACTCAGTGTGAATGAGAGGGAGGTACTTCTTGCTGAAATCCAGAGTCTGAG
GGAGCAACTCAAAAACCAGACTACTGTATCAACTACTGGTAGCCTTCTTGACCAGTTAAG
GAACGGCAGCACAGACCAGGAGTATGAACTTGACAAAGAAAGGCAGAAATGGATGGAGTC
TGAGAGCAAGTGGATTTCACTTACCGAAGAGTTGAGGGTCGATCTAGAATCAAACAGGAT
GCACGCAGAGAAGACCGAGATGGAGCTCTGCAACGAGAAGAAGTGCACAGCAGAGCTAGA
TGACGCTCTTCAACGAGCGATGTACGGCCACGCCAGGATGGTTGAGCATTATGTTGAGCT
GCAGGAGCTGTATAATGATCTTCTCGAGAAGCACCGCCGAGTGATGGAGGCGATCTCTGA
GGTGAAGAGGGCGGCTGCCAGAGCAGGCAGGAAGGGCTGTGGGACGGCCTTCGCTGCTGC
CCTCGCCGCCGAGCTCTCCACGGTGAGAATCGACCGAGAAAAGGAGAGGGCTCAGCTGAA
AGAACAAAACAGAAGGCTCCGCATTCAGCTGCGAGACACTGCCGAAGCTGTTCATGCTGC
TGGAGAACTGCTCGTCAGATTGAGAGAAACCGAGGAAGCATCTACACTAGAAAAGGAGAG
GACTGCCGCGTTGTTGCAAGAGAACGAGAAGCTGAAGAAGCAGCTGGAGAAGCTGAGGAA
GAAGCACGAGATGGAGCTGGAGACGATGAAGGTGCACCTTGCGGAGAGCCGGCTGCCGGA
GTCGGCTTTGGGTGCCTTCTACCACCACGAGAACGAGAGGACGCCGGACGACGATCTGTC
CTGGCGGGCCGCCTTCGCTTCTGCGTACAGTGACTGAAGTTACCTGACTGGGGATTGCTT
GGGAGTTGAGTCTCGTCAACTGAGACAGGTTGACAATTGGGGCATGAGCATTTCTACGAC
CTTGTTTGATTTTAAGTACATGACTCGATTGGGGCATGGGGCAAAGTTTTTATGTATACT
GCTTGTATGGGAACTGAATTTGAACGAGTTTTATGTAGTCTTTCGAGTATTTTTTTGG