Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033110_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:250436681:250439909:1 gene:Zm00001d033110 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inositol-phosphate phosphatase
Sequence

ATGTCGGAGGAGCAGTTCCTCGCCGTGGCGGTGGAAGCCGCCAAGAGCGCCGGCGAGGTT
CTTCTCTGCACTCCTTGCCTTCTTACCCTCTTCTCATGCCGTCTCCTCACTGGTTGCTGG
TTTCCTGAGCAGATTATTCGCAAGGGATTCTACCAGACCAAGAACGTCGAGCACAAGGGC
CAGGTGGATTTGGTGACGGAGACGGACAAGGCCTGCGAGGACCTCATCTTCAACCACCTC
CGGAAGCACTTCCCGGACCACAAGTTCATCGGGGAGGAGGAGTCCGCGGCGCTCGGGGCC
ACCGCTGACCTCACCGACGACCCCACCTGGATCGTCGATCCCCTCGACGGGACCACTAAT
TTCGTCCATGGTTTCCCATTTGTATGTGTCTCCGTTGGCCTCACCATTGGGAAAATTCCC
ACTGTCGGAGTCGTCTTCAACCCCATCATGAACGAGCTTTTCACGGCGGTTCGTGGAAAA
GGGGCTTTCCTGAATGGCTCTCCAATTAAAGCATCATCTCAAGATGAGTTAGTGAAGGCT
CTTCTGGTAACAGAGGACCTCTTAAGAAAATCTGCTGGGGATACTAAACTGATAATTATA
CTGATTGATCAGGCTGGAACCAATAGAGACAAGACCACTGTGGATGATACAACCAACAGA
ATCAACAGGCTACTATACAAGATTCGATCCATACGGATGTGTGGATCATTGGCTTTAAAC
ATGTGTGGAGTTGCCTGTGGTAGACTAGATTTGTGTTATGAGATAGGATTTGGTGGTCCA
TGGGATGTTGCTGCTGGTGCTGTAATTCTTCAGGAAGCCGGTGGCCTTGTTTTTGACCCA
AGCGGCGGAGAGTTTGATTTGATGTCGCGAAGAATGGCAGGATCAAACAGCTTGCTGAAG
GATAAGTTCGTCAAGGAACTGGGGGATACTAATTGA

Peptide Sequence

PEP ID

Zm00001d033110_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:250436681:250439909:1 gene:Zm00001d033110 transcript:Zm00001d033110_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inositol-phosphate phosphatase
Sequence

MSEEQFLAVAVEAAKSAGEVLLCTPCLLTLFSCRLLTGCWFPEQIIRKGFYQTKNVEHKG
QVDLVTETDKACEDLIFNHLRKHFPDHKFIGEEESAALGATADLTDDPTWIVDPLDGTTN
FVHGFPFVCVSVGLTIGKIPTVGVVFNPIMNELFTAVRGKGAFLNGSPIKASSQDELVKA
LLVTEDLLRKSAGDTKLIIILIDQAGTNRDKTTVDDTTNRINRLLYKIRSIRMCGSLALN
MCGVACGRLDLCYEIGFGGPWDVAAGAVILQEAGGLVFDPSGGEFDLMSRRMAGSNSLLK
DKFVKELGDTN

Transcript Sequence

Transcript ID

Zm00001d033110_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:250436681:250439909:1 gene:Zm00001d033110 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inositol-phosphate phosphatase
Sequence

ATGTCGGAGGAGCAGTTCCTCGCCGTGGCGGTGGAAGCCGCCAAGAGCGCCGGCGAGGTT
CTTCTCTGCACTCCTTGCCTTCTTACCCTCTTCTCATGCCGTCTCCTCACTGGTTGCTGG
TTTCCTGAGCAGATTATTCGCAAGGGATTCTACCAGACCAAGAACGTCGAGCACAAGGGC
CAGGTGGATTTGGTGACGGAGACGGACAAGGCCTGCGAGGACCTCATCTTCAACCACCTC
CGGAAGCACTTCCCGGACCACAAGTTCATCGGGGAGGAGGAGTCCGCGGCGCTCGGGGCC
ACCGCTGACCTCACCGACGACCCCACCTGGATCGTCGATCCCCTCGACGGGACCACTAAT
TTCGTCCATGGTTTCCCATTTGTATGTGTCTCCGTTGGCCTCACCATTGGGAAAATTCCC
ACTGTCGGAGTCGTCTTCAACCCCATCATGAACGAGCTTTTCACGGCGGTTCGTGGAAAA
GGGGCTTTCCTGAATGGCTCTCCAATTAAAGCATCATCTCAAGATGAGTTAGTGAAGGCT
CTTCTGGTAACAGAGGACCTCTTAAGAAAATCTGCTGGGGATACTAAACTGATAATTATA
CTGATTGATCAGGCTGGAACCAATAGAGACAAGACCACTGTGGATGATACAACCAACAGA
ATCAACAGGCTACTATACAAGATTCGATCCATACGGATGTGTGGATCATTGGCTTTAAAC
ATGTGTGGAGTTGCCTGTGGTAGACTAGATTTGTGTTATGAGATAGGATTTGGTGGTCCA
TGGGATGTTGCTGCTGGTGCTGTAATTCTTCAGGAAGCCGGTGGCCTTGTTTTTGACCCA
AGCGGCGGAGAGTTTGATTTGATGTCGCGAAGAATGGCAGGATCAAACAGCTTGCTGAAG
GATAAGTTCGTCAAGGAACTGGGGGATACTAATTGAAACAAATGTTAGTATTATTCGTGG
AACAGATTAAGACAATAAGGTTGCCCCGCCGCATGGTGATTAACTTATTGTTTGGGCAAC
AAAATTCCATGTAATTCTGCACCTGTACAACTATGTTGGACGCAGAACATTTTATTGAGT
TTTGTGATTACATGGGAATACATAGGTTGAGGCAACGGTCCCTACTTTATGGCAATATGT
TTGGGTTGGAATGGCTTGAGTCCAATTTCAAGTGTGCTGCAAGGAGGAAAGTAAATTGCT
GGATCTTTACGCATTTGCTGATAATAATATATGGTTGCTACGCTGCAAACAATTTGCGGT
GGCATATTTAAGCAGTGGAGACATTTTTTTGCATTTTAGATTTTTTTACCGAAAATAACG
TTTAGAC