Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033058_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:248897012:248902427:-1 gene:Zm00001d033058 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec20 family protein

Sequence

ATGGATGGAGTCACACAAGCTGTTGAAAATCTTAAGAAAGAATGGGGCCAAGCAGTTTCA
CAGCTTGACGAGAACATTACTGCAATCAAATCATGTGGAAAAACAGGGAAAGGGACAGAG
GAAGCAAATTCTCTTCCAAGGTTGAATGGTTCTGCACAGGATGCTCTGCAGTTGCTGAAG
TCACTGCAGTTCCAGCTTGATCTTCTAGCACAGCAGCTTCCCACTTTTGATGAGGTGCAG
TCTGGTCAAGCAACCTTGAAGTCATGGGATGAACAATACAAGAAGCTTCGTATTAGCTTG
AGGAATGCTAACTTAGAAGCAAAAGACAACATTAGACAAGCTGCTGAAGAGGAGAGGGCA
CTTCTTCTAGGCGGTGGTGAAGAGTCTACCATCCGTAGGCGTAATCTCCAGACAAAGGCT
GGAATGACATCTGCTGCTGAAAGTATCACTGAGAGCCTCCGACGGTCTCGCCAGATGATG
GTTCAGGAAGTGGAAAGAAGTGCTAGTACCTTGGCAACATTTGACGAATCAACAAGTGTT
CTCCAGAAGGCTGAAGGTGAATATCAAGGACATCGCTCTTTGCTGATGCGTACCCGTGGT
TTGCTCTCCACAATGCAACGACAAGATGTTTTTGATAGGATCATCCTGACTATTGGTTTC
ACCATTTTCTCCTTGGCGGTTCTTTACGTTGTCTCGAGACGTATTGGTCTGTTGGCTCTG
CAAAGGAAACTGGCCGATGCCATCAGATCAGGTTCTTTATCAGCTGAGGACATTGTCGCG
AAAGCCCAACATGGACCTGCCCCGGCAAATGTTCCTGCTCCTGCTCCTCGCGTTTACAAT
GAATTATGA

Peptide Sequence

PEP ID

Zm00001d033058_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:248897012:248902427:-1 gene:Zm00001d033058 transcript:Zm00001d033058_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec20 family protein

Sequence

MDGVTQAVENLKKEWGQAVSQLDENITAIKSCGKTGKGTEEANSLPRLNGSAQDALQLLK
SLQFQLDLLAQQLPTFDEVQSGQATLKSWDEQYKKLRISLRNANLEAKDNIRQAAEEERA
LLLGGGEESTIRRRNLQTKAGMTSAAESITESLRRSRQMMVQEVERSASTLATFDESTSV
LQKAEGEYQGHRSLLMRTRGLLSTMQRQDVFDRIILTIGFTIFSLAVLYVVSRRIGLLAL
QRKLADAIRSGSLSAEDIVAKAQHGPAPANVPAPAPRVYNEL

Transcript Sequence

Transcript ID

Zm00001d033058_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:248897012:248902427:-1 gene:Zm00001d033058 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec20 family protein

Sequence

AATTTCTCCTCCACCAAGTTCCTCCTCCCTTCGACTTCCTCTCCCCCGTCTGGCCGTGCA
GCCCCGGAGGCGTCACTGGGCAAGGAGGCTGGGGTGGGGACCTCAAACGCCATGGATGTG
CAGCCCTAGGCACCAGGATGGATGGAGTCACACAAGCTGTTGAAAATCTTAAGAAAGAAT
GGGGCCAAGCAGTTTCACAGCTTGACGAGAACATTACTGCAATCAAATCATGTGGAAAAA
CAGGGAAAGGGACAGAGGAAGCAAATTCTCTTCCAAGGTTGAATGGTTCTGCACAGGATG
CTCTGCAGTTGCTGAAGTCACTGCAGTTCCAGCTTGATCTTCTAGCACAGCAGCTTCCCA
CTTTTGATGAGGTGCAGTCTGGTCAAGCAACCTTGAAGTCATGGGATGAACAATACAAGA
AGCTTCGTATTAGCTTGAGGAATGCTAACTTAGAAGCAAAAGACAACATTAGACAAGCTG
CTGAAGAGGAGAGGGCACTTCTTCTAGGCGGTGGTGAAGAGTCTACCATCCGTAGGCGTA
ATCTCCAGACAAAGGCTGGAATGACATCTGCTGCTGAAAGTATCACTGAGAGCCTCCGAC
GGTCTCGCCAGATGATGGTTCAGGAAGTGGAAAGAAGTGCTAGTACCTTGGCAACATTTG
ACGAATCAACAAGTGTTCTCCAGAAGGCTGAAGGTGAATATCAAGGACATCGCTCTTTGC
TGATGCGTACCCGTGGTTTGCTCTCCACAATGCAACGACAAGATGTTTTTGATAGGATCA
TCCTGACTATTGGTTTCACCATTTTCTCCTTGGCGGTTCTTTACGTTGTCTCGAGACGTA
TTGGTCTGTTGGCTCTGCAAAGGAAACTGGCCGATGCCATCAGATCAGGTTCTTTATCAG
CTGAGGACATTGTCGCGAAAGCCCAACATGGACCTGCCCCGGCAAATGTTCCTGCTCCTG
CTCCTCGCGTTTACAATGAATTATGAATCGCTTTTATTTTCCGTTTTATGAAATGTTTGA
CCAGGAGAGATTGTTAAGGTAATACTTTCCACAAGTAAGCTATTAAGATTTCTTATCTGT
AGTCTCAAATGATGATGCACCAACCTGTCAACGTTTGAAATTCCCAACAAGTTTTGGTTA
CAGTT