Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033029_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:247784835:247786662:1 gene:Zm00001d033029 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cystathionine gamma-synthase 1 chloroplastic
Sequence

ATGGCTCCGTCCAGCAAGCTAGTCAAGACGAACTCACTCCCGAGCCACCAGCGTAGCCTT
GTCCAACCGCTCGGATCTCCCAGGCACAAGCGCGTCTCGGCCTTGTTCCGAGCACCTGAG
TCGTCCCTGCTCCAAGAAGAGTTTGTCACCGCCGCCTCCGGTGAAGCTCATCATCAGGCA
AGGGCAAGGCGCGCTTCCGACGAGACGCTCGCCGTGCACGCTGGGGAGAAGCTCGCCGGA
AAGAAGGACGCGGACGTGGGTGGCACTGGAACAGAGACAGACTCGACGGCCACCCCGATC
GTGAGCGGCACAACGCACTGGTTCAAGAGCTCCGAGGACCTCATAGCCTTCAAGGAAGGC
CGGCGGCACAGCTTCGAGTATGGGCGGTACAGCAACCCGACGGTGAAGGTGCTGGAGGAG
AAGATCAGCGCGCTGGAGAGAGCCGAGGCGACCCTGGTGACGTCCTCCGGCATGAACGCC
ATCACAACGACGCTCCTCGCCCTCGTCCCGCCCGGCGGCCACATCGTGACCACGACCGAC
TGCTACAGCGAGGCGCGCGTGTTCATCCGTGACAGGCTCTCCATGATGGGCGCCATCCGG
TCGACGTTCGTCGACCTCGACGACGGCATGAAGTCGCTGAAGGCCGTCCTCGACGAGAAC
GACGACGTGGCCCTCTTCTACACCGACTCCCCGACGAACCCGATGCTCAAGTGCGTGGAC
ATCAGGCACGTGGCTGAGCTGTGTCACCGGAAGGGTGCCCTGGTGTGCATCGACAGCACC
ATGGCGTCGCCCATCAACCAGAAGCCGCTCACCCTCGGTGCTGACCTTGTCCTCCACTCT
GCCATCAAGTACATGGCCGGCCACCACGATGCCATCGCCGGATGCGTCAGCGGTTCAGAG
GCGCTCATCACCAGGATACGTGCTTGGCACCATCACCTCGGCGGCGTCATCTCTCCGAGC
GCGGCATATATGGTCATCCGTGGGCTCAAAACGATGGCACTCCGCGTCGAGGCACATAAC
AGCACGGCGCTGCGCATGGCACGCATGCTAGAGCGCCACCCGAAGATCGAGCGGGTGCAC
TATCCTGGGCTGGAGAGCAGCCCCTGGCATGAGCTTGCAAGGACTCGGATGTCCGGCTAC
GGAGGCGTTGTCAGCTTCGAGTTGAAGGCGGACTTGCGTGGTACCATGCGTTTTGTCGAT
GCGCTGGAAATCCCCTTCATCGCGACCTCGCTAGGCGGCTGCGAGAGCCTGGTGCAGCAA
CCGGCGGTCATGTCGTTCTGGGGCCACAGTGAGGAGGATAAGGCCAAGAACGGGATCAAG
GACAACCTTGTAAGGTTCAGTTTTGGAATAGAGAAGTTTGAGGATCTCAGGGATGATATA
CTTCAAGCACTAAACAAGATTTGA

Peptide Sequence

PEP ID

Zm00001d033029_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:247784835:247786662:1 gene:Zm00001d033029 transcript:Zm00001d033029_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cystathionine gamma-synthase 1 chloroplastic
Sequence

MAPSSKLVKTNSLPSHQRSLVQPLGSPRHKRVSALFRAPESSLLQEEFVTAASGEAHHQA
RARRASDETLAVHAGEKLAGKKDADVGGTGTETDSTATPIVSGTTHWFKSSEDLIAFKEG
RRHSFEYGRYSNPTVKVLEEKISALERAEATLVTSSGMNAITTTLLALVPPGGHIVTTTD
CYSEARVFIRDRLSMMGAIRSTFVDLDDGMKSLKAVLDENDDVALFYTDSPTNPMLKCVD
IRHVAELCHRKGALVCIDSTMASPINQKPLTLGADLVLHSAIKYMAGHHDAIAGCVSGSE
ALITRIRAWHHHLGGVISPSAAYMVIRGLKTMALRVEAHNSTALRMARMLERHPKIERVH
YPGLESSPWHELARTRMSGYGGVVSFELKADLRGTMRFVDALEIPFIATSLGGCESLVQQ
PAVMSFWGHSEEDKAKNGIKDNLVRFSFGIEKFEDLRDDILQALNKI

Transcript Sequence

Transcript ID

Zm00001d033029_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:247784835:247786662:1 gene:Zm00001d033029 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cystathionine gamma-synthase 1 chloroplastic
Sequence

CAGCACAACACACACAACCGATAAGCCAGCTAGGTGGCATCGTCGTCTTCTTTCCCTGAG
CTACTGATCCAATCTTTGGTTTGAATTGTTAATCACAAGCTCGGTCATGGCTCCGTCCAG
CAAGCTAGTCAAGACGAACTCACTCCCGAGCCACCAGCGTAGCCTTGTCCAACCGCTCGG
ATCTCCCAGGCACAAGCGCGTCTCGGCCTTGTTCCGAGCACCTGAGTCGTCCCTGCTCCA
AGAAGAGTTTGTCACCGCCGCCTCCGGTGAAGCTCATCATCAGGCAAGGGCAAGGCGCGC
TTCCGACGAGACGCTCGCCGTGCACGCTGGGGAGAAGCTCGCCGGAAAGAAGGACGCGGA
CGTGGGTGGCACTGGAACAGAGACAGACTCGACGGCCACCCCGATCGTGAGCGGCACAAC
GCACTGGTTCAAGAGCTCCGAGGACCTCATAGCCTTCAAGGAAGGCCGGCGGCACAGCTT
CGAGTATGGGCGGTACAGCAACCCGACGGTGAAGGTGCTGGAGGAGAAGATCAGCGCGCT
GGAGAGAGCCGAGGCGACCCTGGTGACGTCCTCCGGCATGAACGCCATCACAACGACGCT
CCTCGCCCTCGTCCCGCCCGGCGGCCACATCGTGACCACGACCGACTGCTACAGCGAGGC
GCGCGTGTTCATCCGTGACAGGCTCTCCATGATGGGCGCCATCCGGTCGACGTTCGTCGA
CCTCGACGACGGCATGAAGTCGCTGAAGGCCGTCCTCGACGAGAACGACGACGTGGCCCT
CTTCTACACCGACTCCCCGACGAACCCGATGCTCAAGTGCGTGGACATCAGGCACGTGGC
TGAGCTGTGTCACCGGAAGGGTGCCCTGGTGTGCATCGACAGCACCATGGCGTCGCCCAT
CAACCAGAAGCCGCTCACCCTCGGTGCTGACCTTGTCCTCCACTCTGCCATCAAGTACAT
GGCCGGCCACCACGATGCCATCGCCGGATGCGTCAGCGGTTCAGAGGCGCTCATCACCAG
GATACGTGCTTGGCACCATCACCTCGGCGGCGTCATCTCTCCGAGCGCGGCATATATGGT
CATCCGTGGGCTCAAAACGATGGCACTCCGCGTCGAGGCACATAACAGCACGGCGCTGCG
CATGGCACGCATGCTAGAGCGCCACCCGAAGATCGAGCGGGTGCACTATCCTGGGCTGGA
GAGCAGCCCCTGGCATGAGCTTGCAAGGACTCGGATGTCCGGCTACGGAGGCGTTGTCAG
CTTCGAGTTGAAGGCGGACTTGCGTGGTACCATGCGTTTTGTCGATGCGCTGGAAATCCC
CTTCATCGCGACCTCGCTAGGCGGCTGCGAGAGCCTGGTGCAGCAACCGGCGGTCATGTC
GTTCTGGGGCCACAGTGAGGAGGATAAGGCCAAGAACGGGATCAAGGACAACCTTGTAAG
GTTCAGTTTTGGAATAGAGAAGTTTGAGGATCTCAGGGATGATATACTTCAAGCACTAAA
CAAGATTTGATTTAATTACCTAGGTATCACGATCGACGTGACACATACAACCCCATCAAG
CCTACAGTTTTGACTTTTCTTACCATAGAGACTTATATATCTTTATTAGACCATGTCTAG
CAGTTTATTTATATAGTCATATAAAATACTATTTTGTATTGTAGATTGTATTGTTTGTAA
AGTGAAATTTGAATACGTATATATATATATATGAGGATGAATAAATT