Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033019_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:247131930:247133012:1 gene:Zm00001d033019 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPD1

Sequence

ATGGGACAACGGCGCTTTGAGGACGAACGCGCAGCTCTGGCGACTGTGGCAAGCTTGCTG
CTCATCCTAACGACAGCCCAAGCTGCTGCTGCTGCTGCTTCTGGACGCCATCTGTCTTTG
CCCACGCAGAAGGCGGCGGCGGCGCGCATGAACGACACCAGTAGTAGTGACATGCAGGTC
ATCACACCCGCGCCGCTCGCTATCTCGACGGCGGCTCGAATGGGGCCGGACGGGTGCTCC
GGGGAGGACGTGGCGGTGTACCAGAGCAGCGCCAACCCTCTGCCCAGCGGCATCCCGGCC
TACACCGTGCGCATCATCAACGTCTGCAGCGGGGGGTGCACCGTCTACGACGTCCACGTC
TCCTGCGGCGACTTCGCGTCCACGGAGCTGGTCGACCCGGCCAAGTTCCAGCGCGTCGGC
TTCAACGACTGCGTCGTCAAGGGCGGTGGCGCGCTCGAGCCCAGCGAGACCGTCTCCTTC
CAGTACTCCAACTCCTTCTCGTACCACCTCAGCGTTGCGTCCGTCGCTTGCCGTTAG

Peptide Sequence

PEP ID

Zm00001d033019_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:247131930:247133012:1 gene:Zm00001d033019 transcript:Zm00001d033019_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPD1

Sequence

MGQRRFEDERAALATVASLLLILTTAQAAAAAASGRHLSLPTQKAAAARMNDTSSSDMQV
ITPAPLAISTAARMGPDGCSGEDVAVYQSSANPLPSGIPAYTVRIINVCSGGCTVYDVHV
SCGDFASTELVDPAKFQRVGFNDCVVKGGGALEPSETVSFQYSNSFSYHLSVASVACR

Transcript Sequence

Transcript ID

Zm00001d033019_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:247131930:247133012:1 gene:Zm00001d033019 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPD1

Sequence

GTAGTAAACTATTATTAGCCTTTCTATTTATAGTGGCTGAGAGACGGGCGGACATTCTCG
TACCACGTTCAAAACGGCAAGTCGATCGATCTGAAACCACAGATCGATCGACGACCAGCA
GAAGACGACGTACGTGAAACCGCGAGACAGTGCGAGGACGACTGGGGTGTGGCGGTGCGA
TCCATCGACAAGGCCATGGGACAACGGCGCTTTGAGGACGAACGCGCAGCTCTGGCGACT
GTGGCAAGCTTGCTGCTCATCCTAACGACAGCCCAAGCTGCTGCTGCTGCTGCTTCTGGA
CGCCATCTGTCTTTGCCCACGCAGAAGGCGGCGGCGGCGCGCATGAACGACACCAGTAGT
AGTGACATGCAGGTCATCACACCCGCGCCGCTCGCTATCTCGACGGCGGCTCGAATGGGG
CCGGACGGGTGCTCCGGGGAGGACGTGGCGGTGTACCAGAGCAGCGCCAACCCTCTGCCC
AGCGGCATCCCGGCCTACACCGTGCGCATCATCAACGTCTGCAGCGGGGGGTGCACCGTC
TACGACGTCCACGTCTCCTGCGGCGACTTCGCGTCCACGGAGCTGGTCGACCCGGCCAAG
TTCCAGCGCGTCGGCTTCAACGACTGCGTCGTCAAGGGCGGTGGCGCGCTCGAGCCCAGC
GAGACCGTCTCCTTCCAGTACTCCAACTCCTTCTCGTACCACCTCAGCGTTGCGTCCGTC
GCTTGCCGTTAGATAACTGCTGGTGAGCCAGTGCCGTTAAATAACTGAAGCCGTCGGCCC
GTGATGATATATATATAACACCTGGAGTAGCTAGCTAGTTCCACGTACGTGTTGGTGTTG
TGTTGAGTAGTCTACGTATGTGTACTTCGATCTGCATTGTGTTTGTGTGTGTCTAACTAT
TTCTACGGTCGTTGTTGTCGCTACACGTTTTTACGTCTAATACTATATTCTGGTGAATAA
ATTGAAGTTATTACTCGG