Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033005_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:246790551:246792861:-1 gene:Zm00001d033005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 49 description:Homeobox-leucine zipper protein HAT7
Sequence	ATGAAGCCAATGGCCACCAATGGCATGGCCCCTTCCTTCTACCCGGCCAACTTCCTCCTC CAAATGCAGCAAGCCCTGCCTCACCACTACCAGCAGCAGGAGCAGCACCATGAAGGCCAC GACGACGAGGACCACGAGGCGGCGCACCATCTCCTGGCTCCCCCTCCCGCGGCCCTCGTC AGCCCTTTCCTCCACGACTTCGGCGGCGCCATGGCGGCCGCGCCGCCGCCGCCAATGCTG GCCGGCGGCTTCGGCGGCAAGCGCATGTATCCAGACGTCGGCGGGATGGCCGGCGACGAC AGCCACCACCTGCACGCGGAGCCCCAGCAGCAGCAGGAGCAGCAGGCGTCGGACGACGAG GAGGAGGGGTCCGCCGCGGTGGGCGGCGGCGAGCGGAAGCGGCGGCTGAGCGTGGACCAG GTGCGCACCCTGGAGCGCAGCTTCGAGGTGGCCAACAAGCTGGAGCCCGAGCGCAAGGCG CAGCTGGCCCGCGCGCTGGGGCTGCAGCCCCGCCAGGTGGCCATCTGGTTCCAGAACCGC CGCGCCAGGTGGAAGACCAAGCAGCTGGAGAAGGACTACGACGCGCTGCGCCGCCAGCTC GACGCCGCCCGCGCCGAGAACGACGCCCTCCTCTCCCACAACAAGAAGCTACAGGCAGAG ATCATGGCGCTCAAGGGAGGCGGAGGCGGCGGAGGGAGGCAGGAGGCGGCGTCGGAGCTC ATCAACCTCAACGTCAGAGAGACGGAGGCGTCCTGCAGCGAGAATAACAGCTCCGAGATC AACGGCCTCGACGTCTCCAGGCCTGATCCGGCCGCCGGCGAGAGCCCCGCCATGAACAGC TACCGCGGCGGCCTCCCGTTCTACGCCTCCGCTGCCGCCCGCGCCGACATCCACCACCAG CTCCTGCACAGCGGCGGCCAGCCGTCCCCAGCCGCGGCGGCGCCGCCTAAGATGGAGCTC GCCCCCGGCAGTCCTCCCGCCACGGCCGGTGGCGGCGGAGGCACCTTTGGCAGCCTGCTG TGCGGCGCCGCTGTCGACGAGCCGCCGCCGTTCTGGTCGTGGGCCGACGGACACCACACC TGCTTCCAGTGA

Peptide Sequence

PEP ID	Zm00001d033005_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:246790551:246792861:-1 gene:Zm00001d033005 transcript:Zm00001d033005_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 49 description:Homeobox-leucine zipper protein HAT7
Sequence	MKPMATNGMAPSFYPANFLLQMQQALPHHYQQQEQHHEGHDDEDHEAAHHLLAPPPAALV SPFLHDFGGAMAAAPPPPMLAGGFGGKRMYPDVGGMAGDDSHHLHAEPQQQQEQQASDDE EEGSAAVGGGERKRRLSVDQVRTLERSFEVANKLEPERKAQLARALGLQPRQVAIWFQNR RARWKTKQLEKDYDALRRQLDAARAENDALLSHNKKLQAEIMALKGGGGGGGRQEAASEL INLNVRETEASCSENNSSEINGLDVSRPDPAAGESPAMNSYRGGLPFYASAAARADIHHQ LLHSGGQPSPAAAAPPKMELAPGSPPATAGGGGGTFGSLLCGAAVDEPPPFWSWADGHHT CFQ

Transcript Sequence

Transcript ID	Zm00001d033005_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:246790551:246792861:-1 gene:Zm00001d033005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 49 description:Homeobox-leucine zipper protein HAT7
Sequence	GCATCTTGCATTGCAGGTTCCAGCTCGGCATCTCTGGCACAGAGACGCGCCCTCAACCAA CACCCCCTCTCTAGCTCTCTGAATCTGTGCTTCTGTTGGGAAGGAAGGAAGGTTGATATA CTCCCCAGCTCCCCCATGCTCCTCTCGCTCCTGTGATGAAGCCAATGGCCACCAATGGCA TGGCCCCTTCCTTCTACCCGGCCAACTTCCTCCTCCAAATGCAGCAAGCCCTGCCTCACC ACTACCAGCAGCAGGAGCAGCACCATGAAGGCCACGACGACGAGGACCACGAGGCGGCGC ACCATCTCCTGGCTCCCCCTCCCGCGGCCCTCGTCAGCCCTTTCCTCCACGACTTCGGCG GCGCCATGGCGGCCGCGCCGCCGCCGCCAATGCTGGCCGGCGGCTTCGGCGGCAAGCGCA TGTATCCAGACGTCGGCGGGATGGCCGGCGACGACAGCCACCACCTGCACGCGGAGCCCC AGCAGCAGCAGGAGCAGCAGGCGTCGGACGACGAGGAGGAGGGGTCCGCCGCGGTGGGCG GCGGCGAGCGGAAGCGGCGGCTGAGCGTGGACCAGGTGCGCACCCTGGAGCGCAGCTTCG AGGTGGCCAACAAGCTGGAGCCCGAGCGCAAGGCGCAGCTGGCCCGCGCGCTGGGGCTGC AGCCCCGCCAGGTGGCCATCTGGTTCCAGAACCGCCGCGCCAGGTGGAAGACCAAGCAGC TGGAGAAGGACTACGACGCGCTGCGCCGCCAGCTCGACGCCGCCCGCGCCGAGAACGACG CCCTCCTCTCCCACAACAAGAAGCTACAGGCAGAGATCATGGCGCTCAAGGGAGGCGGAG GCGGCGGAGGGAGGCAGGAGGCGGCGTCGGAGCTCATCAACCTCAACGTCAGAGAGACGG AGGCGTCCTGCAGCGAGAATAACAGCTCCGAGATCAACGGCCTCGACGTCTCCAGGCCTG ATCCGGCCGCCGGCGAGAGCCCCGCCATGAACAGCTACCGCGGCGGCCTCCCGTTCTACG CCTCCGCTGCCGCCCGCGCCGACATCCACCACCAGCTCCTGCACAGCGGCGGCCAGCCGT CCCCAGCCGCGGCGGCGCCGCCTAAGATGGAGCTCGCCCCCGGCAGTCCTCCCGCCACGG CCGGTGGCGGCGGAGGCACCTTTGGCAGCCTGCTGTGCGGCGCCGCTGTCGACGAGCCGC CGCCGTTCTGGTCGTGGGCCGACGGACACCACACCTGCTTCCAGTGAACAAGTCAAATAC GTACGATTCTTCCCATTCGTCATACACGGTGAGCCACGGATCCAACAGCACGTCGTCGGC CGCCGCCGACGTATATGTTGTGGGCAATGCAAATGCCTCGTACGTGTTGAACAAATTGAT CAAAGAAGCAGCTCGGATATGCGAGGTGATCCATTGGATGAGATGTTCCAATTTGAGTTC GATCGAGATTAGGATCATGCACGGAGTGAATCATATATACGAGTATAGCTAGATTTTGGA GTTGAGTAGTATGTTTTTCTTCTTCTTTCTATTATTACTTAATTATTTCTCCCATCTCTC TTTATTTATCACTGTTTTCCTGTTTAATTAATATCATATATAGGTGAATACATTTGTGAG GCAGTGGTGATGTTATATATTATGCATATAGGATTATGGTACCTTGTCA