Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032888_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:241518159:241519896:1 gene:Zm00001d032888 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anther-specific proline-rich protein APG

Sequence

ATGGTGAGCAGGCGCACTCTCCTCGTCATGATGGCGACGGTAGTGGTTCTGCATCGGAGT
CGGACTCTCTGCGCTGCTGCCTCGGCGGCTGCAGCGCCGCCGGCGACGACGAAGCAGGCG
CGGACCCCGGCGCTGTTCGTGTTCGGGGACTCCATCGTGGACCCGGGCAACAACAACGCC
CTCACCACCACGGTGCGCTGCAACTTCCCGCCCTACGGCCAGGACTTCCCCGGCCACAAC
GCCACCGGCAGGTTCAGCAACGGCAGGGTGCCCGGCGACATCGTCGCCAGCCGCCTGGGC
ATCAAGGAGCACCTGCCCGCGTACCTCGGCACAGAGCTCAGCGACTTCGACCTCCTCACC
GGCGTCAGCTTCGCGTCCGGCGGCTGCGGCTTCGACCCCCTCACCGCCGAGCTCGTGTCC
GTGCTCACCATGGACAACCAGCTGGACCTGTTCAAGGAGTACAAGGAGAAGCTGGAGCGC
GTCGCCGGCGGCGCCCACCGGGCCGCCGACATCGTGTCCAGGAGCCTTTACATGGTGGTC
ACGGGCACCGACGACCTCGCCAACACCTACTTCACCACGCCGTTCCGCCGCGACTACGAC
CTCGAGTCCTACATCGAGTTCGTCGTGCAGTGCGCCTCCGACTTCATCAAGAAGCTGTAC
GGTCTGGGCGCGCGGCGCATCAACATCGCCGGCGCACCGCCCATCGGGTGCGTGCCGTCG
CAGCGGACCAACGCCGGCGGGCTGGATCGGGAGTGCGTGCCGCTGTACAACCAGGCGGCC
GTCGTGTTCAACGCGGCGCTGGAGAAGGAGATCAAGCGGCTCAACGGCAGCGACGCGCTC
CCGGCCTCCGTGCTCCAGTACATCGACCTCTACACGCCGCTGCTCGACATGATCCAGCGC
CCTGACGCCTACGGATTCAACGTGACGAACCGGGGGTGCTGCGGCACGGGGGTGTTCGAG
GTGACGCTGACGTGCAACCGGTACACGGCGGAACCCTGCAGGGACCCCAGCAAGTTCCTC
TTCTGGGACACCTACCACCTCACGGAGAGGGGCTACGACCTCCTCATGGCACAGATCATA
AACCGATACGGGGTCTGA

Peptide Sequence

PEP ID

Zm00001d032888_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:241518159:241519896:1 gene:Zm00001d032888 transcript:Zm00001d032888_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anther-specific proline-rich protein APG

Sequence

MVSRRTLLVMMATVVVLHRSRTLCAAASAAAAPPATTKQARTPALFVFGDSIVDPGNNNA
LTTTVRCNFPPYGQDFPGHNATGRFSNGRVPGDIVASRLGIKEHLPAYLGTELSDFDLLT
GVSFASGGCGFDPLTAELVSVLTMDNQLDLFKEYKEKLERVAGGAHRAADIVSRSLYMVV
TGTDDLANTYFTTPFRRDYDLESYIEFVVQCASDFIKKLYGLGARRINIAGAPPIGCVPS
QRTNAGGLDRECVPLYNQAAVVFNAALEKEIKRLNGSDALPASVLQYIDLYTPLLDMIQR
PDAYGFNVTNRGCCGTGVFEVTLTCNRYTAEPCRDPSKFLFWDTYHLTERGYDLLMAQII
NRYGV

Transcript Sequence

Transcript ID

Zm00001d032888_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:241518159:241519896:1 gene:Zm00001d032888 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anther-specific proline-rich protein APG

Sequence

TCAGGCAGATCGCAGTCGCAGCACCGAAGATGGTGAGCAGGCGCACTCTCCTCGTCATGA
TGGCGACGGTAGTGGTTCTGCATCGGAGTCGGACTCTCTGCGCTGCTGCCTCGGCGGCTG
CAGCGCCGCCGGCGACGACGAAGCAGGCGCGGACCCCGGCGCTGTTCGTGTTCGGGGACT
CCATCGTGGACCCGGGCAACAACAACGCCCTCACCACCACGGTGCGCTGCAACTTCCCGC
CCTACGGCCAGGACTTCCCCGGCCACAACGCCACCGGCAGGTTCAGCAACGGCAGGGTGC
CCGGCGACATCGTCGCCAGCCGCCTGGGCATCAAGGAGCACCTGCCCGCGTACCTCGGCA
CAGAGCTCAGCGACTTCGACCTCCTCACCGGCGTCAGCTTCGCGTCCGGCGGCTGCGGCT
TCGACCCCCTCACCGCCGAGCTCGTGTCCGTGCTCACCATGGACAACCAGCTGGACCTGT
TCAAGGAGTACAAGGAGAAGCTGGAGCGCGTCGCCGGCGGCGCCCACCGGGCCGCCGACA
TCGTGTCCAGGAGCCTTTACATGGTGGTCACGGGCACCGACGACCTCGCCAACACCTACT
TCACCACGCCGTTCCGCCGCGACTACGACCTCGAGTCCTACATCGAGTTCGTCGTGCAGT
GCGCCTCCGACTTCATCAAGAAGCTGTACGGTCTGGGCGCGCGGCGCATCAACATCGCCG
GCGCACCGCCCATCGGGTGCGTGCCGTCGCAGCGGACCAACGCCGGCGGGCTGGATCGGG
AGTGCGTGCCGCTGTACAACCAGGCGGCCGTCGTGTTCAACGCGGCGCTGGAGAAGGAGA
TCAAGCGGCTCAACGGCAGCGACGCGCTCCCGGCCTCCGTGCTCCAGTACATCGACCTCT
ACACGCCGCTGCTCGACATGATCCAGCGCCCTGACGCCTACGGATTCAACGTGACGAACC
GGGGGTGCTGCGGCACGGGGGTGTTCGAGGTGACGCTGACGTGCAACCGGTACACGGCGG
AACCCTGCAGGGACCCCAGCAAGTTCCTCTTCTGGGACACCTACCACCTCACGGAGAGGG
GCTACGACCTCCTCATGGCACAGATCATAAACCGATACGGGGTCTGACGTCTGAGATGGA
TGCCATGACAGCGCAGCGCTGGAGATTTCGGCGCTATGACAGCGCGGTCCATGCTTTCAG
AGGCTTTTGCTGAATTTGATCTTGTAGGTGAACTACGACTCCAGAAATCACCGGTCCAAT
ATCATATCCCAGTTTGTAATGGGTACATGTAGTGACAGTTGTTTGCTTGTATTGCATAAA
TGAAAACTGAATCAGGACAGGCAGTGACAGTTGACAAA