Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032859_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:1:240510363:240515727:-1 gene:Zm00001d032859 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell division control protein 48 homolog D
Sequence

ATGGCGAGCCAAGGGGAGCCCTCGGCCTCTGCTTCCGATCCGAAGGAGAAGAAGGACTAC
TCGACGGCGATACTAGAGAGGAAAAAGTCACCGAACCGCCTTGTCGTCGACGAGGCCACC
AACGACGATAACTCCGTCGTCGCACTGCACCCTGACACCATGGAGAGGCTGCAGCTCTTC
CGCGGCGATACTGTGCTCCTCAAGGGTAAGAAGAGGAAAGACACTGTTTGCATTGTCCTT
GCGGATGAAACCTGTGAGGAGCCAAAGGTTCGGATGAACAAGGTTGTCCGCCAGAACCTG
AGGGTGAGGCTTGGTGATGTGGTTTCTGTCCACCAGTGCCAGGATGTGAAATATGGGAAG
CGTGTGCACATTCTTCCAATTGATGATACAGTTGAAGGCATTACAGGGAACCTGTTTGAT
GCCTTCTTGAAACCATACTTCCTAGAAGCATACAGGCCCGTGAGGAAAGGAGACCTTTTC
CTTGTCAGGGGTGGAATGAGAAGCGTGGAATTCAAAGTGATAGAGACTGACCCTTCTGAA
TATTGTATCGTTGCCCCAGATACTGAAATATTTTGTGATGGGGAGCCTATTAAGAGAGAG
GATGAGGAGCGTCTTGATGAAGTTGGTTATGATGATGTTGGTGGAGTTAGAAAGCAAATG
GCCCAAATCAGAGAGCTTGTTGAGCTTCCACTACGCCATCCTCAGCTTTTCAAATCTATT
GGTGTGAAGCCACCAAAGGGCATATTGCTGTATGGGCCACCTGGTTCTGGAAAGACTCTT
ATTGCTCGTGCTGTTGCTAATGAGACTGGAGCCTTTTTCTTTCTGATCAATGGCCCAGAG
ATTATGTCGAAGTTAGCAGGAGAGAGTGAGAGCAATCTCAGAAAGGCATTTGAAGAAGCA
GAGAAGAATGCTCCATCTATCATTTTCATTGATGAAATTGATTCCATTGCACCCAAGAGA
GAAAAGACCAATGGAGAAGTAGAACGTCGTATTGTTTCACAGCTACTGACTCTTATGGAT
GGACTCAAATCTCGTTCCCATGTTATTGTTATGGGTGCTACAAACCGGCCAAACAGCATC
GATCCTGCTCTTAGAAGATTTGGAAGGTTTGACCGGGAAATTGACATTGGAGTTCCTGAT
GAAGTTGGCCGGCTTGAGGTTCTCCGTATTCACACTAAGAACATGAAGCTAGCTGAAGAT
GTTAATTTGGAACTCATTTCAAAGGATACCCATGGATACGTTGGTGCTGATCTTGCTGCT
CTTTGTACTGAGGCTGCTCTTCAGTGCATTCGTGAGAAGATGGACATCATAGATCTTGAG
GATGAGACAATAGATGCAGAGATATTGAACTCGATGGCTGTTACAAATGACCATTTCAAG
ACTGCGCTTGGAACAAGCAACCCATCTGCTCTCCGTGAAACTGTTGTTGAAGTCCCAAAT
GTCTCTTGGGAGGATATTGGTGGGCTGGAGAATGTCAAGAGGGAGCTCCAGGAGACTGTT
CAATATCCTGTGGAACATCCAGAGAAGTTCGAGAAGTTTGGCATGTCTCCATCCAAAGGA
GTTCTGTTTTATGGTCCTCCTGGTTGTGGTAAAACCTTGTTGGCGAAGGCAATTGCCAAC
GAGTGCCAGGCTAACTTCATCAGTGTCAAGGGTCCTGAATTGCTTACCATGTGGTTTGGT
GAGAGTGAAGCCAACGTCCGCGAAATTTTTGATAAGGCTCGCCAATCTGCTCCTTGTGTC
CTCTTCTTTGATGAGCTTGACTCAATTGCGACTCAGAGAGGAAGTAGTGTGGGTGATGCT
GGAGGCGCGGCTGATAGAGTGCTTAATCAGCTACTGACCGAGATGGATGGCATGAACGCC
AAGAAAACTGTGTTTATTATTGGTGCTACAAACAGGCCTGACATCATTGATCCTGCTCTT
CTGAGGCCAGGGCGTCTTGACCAGCTGATCTACATTCCACTGCCTGATGAGCAGTCTAGG
CTCCAGATCTTCAAGGCCTGCCTAAGGAAGTCCCCTGTGGCAAAGGATGTGGACCTGAAT
GCTCTTGCTAAGTACACACAAGGGTTCAGTGGAGCAGATATCACAGAAATTTGCCAGCGT
GCGTGCAAATATGCAATCAGAGAGAACATTGAGAAGGACATTGAGAGGGAAAGGCGGATG
AAGGACAACCCTGAGGCGATGGAGGAAGATGAAGTGGACGAGATTGCCGAGATCAAAGCA
GCTCACTTCGAGGAGTCTATGAAGTATGCTCGGCGCAGTGTCAGTGATGCTGATATCCGC
AAGTACCAGGCGTTCGCCCAGACGTTGCAGCAGTCCCGTGGGTTCGGCAGCGAGTTCCGC
TTCTCAGAGCAGTCGGCGACAGCTGGTGCTGCTGCAGCCGATCCGTTTGCTTCGGCTGGT
GCTGCGGCTGACGATGACGATCTATACAGCTAG

Peptide Sequence

PEP ID

Zm00001d032859_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:1:240510363:240515727:-1 gene:Zm00001d032859 transcript:Zm00001d032859_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell division control protein 48 homolog D
Sequence

MASQGEPSASASDPKEKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLF
RGDTVLLKGKKRKDTVCIVLADETCEEPKVRMNKVVRQNLRVRLGDVVSVHQCQDVKYGK
RVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPSE
YCIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI
GVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA
EKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSI
DPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLELISKDTHGYVGADLAA
LCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPN
VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN
ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA
GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSR
LQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRM
KDNPEAMEEDEVDEIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFR
FSEQSATAGAAAADPFASAGAAADDDDLYS

Transcript Sequence

Transcript ID

Zm00001d032859_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:240510363:240515727:-1 gene:Zm00001d032859 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell division control protein 48 homolog D
Sequence

GACTCCGGCTCGAAGTCATACCGTAGAAGACTCCAGAACGTTCCCTGCCATGTGGGCCGT
ACACTGGTCCAGGCCCCGCGAGTCAGTGATGTACCAGGTGACGTGGCTCTCTCCGAGTTC
CAAACCCTCGCCGCAAGAAAGAAGCTATAAAGGAAAGCTAATCCCCCTTCCTTGAGTCCT
CCGCATCTCGCATTCTCGCCGGTGCTGCTGCAATTAACGCCACCCCCGGCCAACCGCCTG
AAAACTACCTCTGCCGCCGGCGCCGCCATCCCCAACATGGCGAGCCAAGGGGAGCCCTCG
GCCTCTGCTTCCGATCCGAAGGAGAAGAAGGACTACTCGACGGCGATACTAGAGAGGAAA
AAGTCACCGAACCGCCTTGTCGTCGACGAGGCCACCAACGACGATAACTCCGTCGTCGCA
CTGCACCCTGACACCATGGAGAGGCTGCAGCTCTTCCGCGGCGATACTGTGCTCCTCAAG
GGTAAGAAGAGGAAAGACACTGTTTGCATTGTCCTTGCGGATGAAACCTGTGAGGAGCCA
AAGGTTCGGATGAACAAGGTTGTCCGCCAGAACCTGAGGGTGAGGCTTGGTGATGTGGTT
TCTGTCCACCAGTGCCAGGATGTGAAATATGGGAAGCGTGTGCACATTCTTCCAATTGAT
GATACAGTTGAAGGCATTACAGGGAACCTGTTTGATGCCTTCTTGAAACCATACTTCCTA
GAAGCATACAGGCCCGTGAGGAAAGGAGACCTTTTCCTTGTCAGGGGTGGAATGAGAAGC
GTGGAATTCAAAGTGATAGAGACTGACCCTTCTGAATATTGTATCGTTGCCCCAGATACT
GAAATATTTTGTGATGGGGAGCCTATTAAGAGAGAGGATGAGGAGCGTCTTGATGAAGTT
GGTTATGATGATGTTGGTGGAGTTAGAAAGCAAATGGCCCAAATCAGAGAGCTTGTTGAG
CTTCCACTACGCCATCCTCAGCTTTTCAAATCTATTGGTGTGAAGCCACCAAAGGGCATA
TTGCTGTATGGGCCACCTGGTTCTGGAAAGACTCTTATTGCTCGTGCTGTTGCTAATGAG
ACTGGAGCCTTTTTCTTTCTGATCAATGGCCCAGAGATTATGTCGAAGTTAGCAGGAGAG
AGTGAGAGCAATCTCAGAAAGGCATTTGAAGAAGCAGAGAAGAATGCTCCATCTATCATT
TTCATTGATGAAATTGATTCCATTGCACCCAAGAGAGAAAAGACCAATGGAGAAGTAGAA
CGTCGTATTGTTTCACAGCTACTGACTCTTATGGATGGACTCAAATCTCGTTCCCATGTT
ATTGTTATGGGTGCTACAAACCGGCCAAACAGCATCGATCCTGCTCTTAGAAGATTTGGA
AGGTTTGACCGGGAAATTGACATTGGAGTTCCTGATGAAGTTGGCCGGCTTGAGGTTCTC
CGTATTCACACTAAGAACATGAAGCTAGCTGAAGATGTTAATTTGGAACTCATTTCAAAG
GATACCCATGGATACGTTGGTGCTGATCTTGCTGCTCTTTGTACTGAGGCTGCTCTTCAG
TGCATTCGTGAGAAGATGGACATCATAGATCTTGAGGATGAGACAATAGATGCAGAGATA
TTGAACTCGATGGCTGTTACAAATGACCATTTCAAGACTGCGCTTGGAACAAGCAACCCA
TCTGCTCTCCGTGAAACTGTTGTTGAAGTCCCAAATGTCTCTTGGGAGGATATTGGTGGG
CTGGAGAATGTCAAGAGGGAGCTCCAGGAGACTGTTCAATATCCTGTGGAACATCCAGAG
AAGTTCGAGAAGTTTGGCATGTCTCCATCCAAAGGAGTTCTGTTTTATGGTCCTCCTGGT
TGTGGTAAAACCTTGTTGGCGAAGGCAATTGCCAACGAGTGCCAGGCTAACTTCATCAGT
GTCAAGGGTCCTGAATTGCTTACCATGTGGTTTGGTGAGAGTGAAGCCAACGTCCGCGAA
ATTTTTGATAAGGCTCGCCAATCTGCTCCTTGTGTCCTCTTCTTTGATGAGCTTGACTCA
ATTGCGACTCAGAGAGGAAGTAGTGTGGGTGATGCTGGAGGCGCGGCTGATAGAGTGCTT
AATCAGCTACTGACCGAGATGGATGGCATGAACGCCAAGAAAACTGTGTTTATTATTGGT
GCTACAAACAGGCCTGACATCATTGATCCTGCTCTTCTGAGGCCAGGGCGTCTTGACCAG
CTGATCTACATTCCACTGCCTGATGAGCAGTCTAGGCTCCAGATCTTCAAGGCCTGCCTA
AGGAAGTCCCCTGTGGCAAAGGATGTGGACCTGAATGCTCTTGCTAAGTACACACAAGGG
TTCAGTGGAGCAGATATCACAGAAATTTGCCAGCGTGCGTGCAAATATGCAATCAGAGAG
AACATTGAGAAGGACATTGAGAGGGAAAGGCGGATGAAGGACAACCCTGAGGCGATGGAG
GAAGATGAAGTGGACGAGATTGCCGAGATCAAAGCAGCTCACTTCGAGGAGTCTATGAAG
TATGCTCGGCGCAGTGTCAGTGATGCTGATATCCGCAAGTACCAGGCGTTCGCCCAGACG
TTGCAGCAGTCCCGTGGGTTCGGCAGCGAGTTCCGCTTCTCAGAGCAGTCGGCGACAGCT
GGTGCTGCTGCAGCCGATCCGTTTGCTTCGGCTGGTGCTGCGGCTGACGATGACGATCTA
TACAGCTAGGTGTCCTGTTGGGTTGGTTCTGGGTTGTGCAATATCAGTCTCATCAGTCAT
CTGTTTAAAACTCTGATTATACTTAGACACGGGATGTCATGCAATGATATTTGTTTTCCG
TACATTTGGACGTTGAGATAATGCCTGTTTATTTTATGCCATACTCTCCATGCCATTTT