Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032806_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:238892692:238896121:1 gene:Zm00001d032806 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase 12
Sequence	ATGTGCGATGGCTATCACGGGCAGCAAGGTGGCAACGTCGCGGCGGCGGATGCAGGAGTC CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGTGCTTGACGGGCAACCCAATCGACGACTG CTGGCGGTGCGCGGCATCGGGTTCGGGCGCAACGCGCTGGGCGGCAAGGGCGGGCCGGTG TACGTGGTGACGGACCCGTCGGACCGCGACCCCGTGAACCCGTCCCCTGGCACGCTCCGG CACGCCGCCATCCAGGAGGGCCCGCTGTGGATCGTGTTCGCGTCGGACATGGCCATCCGG CTGAACGAGGAGCTGCTGGTGAACAGCTACAAGACGATCGACGGGCGCGGCGCGCGCGTG CACGTGGGCGGCGGCGGCGCGTGCATCACGCTGCAGTACGTGTCGAACGTGATCATCCAC AACGTGCACGTGCACGACTGCGTGCCGGCGGGGAACGCCGACGTGCGGTCGTCGCCGACG CACTACGGGTGGCGCACGCGGTCGGACGGCGACGGCATCTCGCTGTTCGGCGCGCGGGAC GTGTGGGTGGACCACTGCGCGCTGTGGCGGTGCGCGGACGGGCTGGTGGACGCCATCATG GGGTCCACCGCCATCACCGTGTCCAACAGCTACTTCGCGCACCACGACGAGGTGATGCTG CTGGGCGCCAGCGACGCGTACCTGCCCGACTCCGGGATGCAGGTCACCATCGCCTTCAAC CGGTTCGGCCCGGGGCTGGTGCAGCGGATGCCCCGCTGCCGACGCGGCTACTTCCACATC GTCAACAACGACTACACGTCGTGGGAGATGTACGCCATCGGCGGCAGCGCCGGCCCCACC ATCAACAGCCAGGGCAACCGCTACATCGCGCCGGCCGACCCCAACGCCAAGGAGGTGACG AAGCGGGTGGAGACGGCGGAGGGGCAGTGGGCCGGGTGGAACTGGCGGACGGAGGGCGAC ATGATGGTGAACGGCGCCTTCTTCGTGCCTTCCGGCGAGGGGATGGAGGACATCTACGGC AAGGCCTCCAGCACCGACCCCAAGTCGTCCGCGCTCGTCGACGTGCTCACGCAGAACGCC GGCGTCCTCGGCGACCCCAGGAACGACGCCGAAGAAACCGGGTACAGGGGCGTCAACTAC GCCGGCGGGAGAACTGGCGGCGGCGGCGGCTACGGATACGGCTACCTCGGGATGGTCTAC GCCGGCGGCGGCGACCAGAGATGGAGATCGCACTCGGCGCTGTCACTGGTTTCTTCAGCT ATCACCGTCGTTGCGCTCGGATGCTTGCATTTGTTGTAA

Peptide Sequence

PEP ID	Zm00001d032806_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:238892692:238896121:1 gene:Zm00001d032806 transcript:Zm00001d032806_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase 12
Sequence	MCDGYHGQQGGNVAAADAGVRRRRRRRRRRVLDGQPNRRLLAVRGIGFGRNALGGKGGPV YVVTDPSDRDPVNPSPGTLRHAAIQEGPLWIVFASDMAIRLNEELLVNSYKTIDGRGARV HVGGGGACITLQYVSNVIIHNVHVHDCVPAGNADVRSSPTHYGWRTRSDGDGISLFGARD VWVDHCALWRCADGLVDAIMGSTAITVSNSYFAHHDEVMLLGASDAYLPDSGMQVTIAFN RFGPGLVQRMPRCRRGYFHIVNNDYTSWEMYAIGGSAGPTINSQGNRYIAPADPNAKEVT KRVETAEGQWAGWNWRTEGDMMVNGAFFVPSGEGMEDIYGKASSTDPKSSALVDVLTQNA GVLGDPRNDAEETGYRGVNYAGGRTGGGGGYGYGYLGMVYAGGGDQRWRSHSALSLVSSA ITVVALGCLHLL

Transcript Sequence

Transcript ID	Zm00001d032806_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:238892692:238896121:1 gene:Zm00001d032806 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase 12
Sequence	CTCTCTCTCTCTCTCTTCACAAGTTTATCCCTCCCCTCTCTGCTCCTCAGTTCGTTCACC CCCTTTCCCCATTCACACTCGCTCCCATATCCACTGCCCCCATTGCCATTGCTGCCCCCA ACCCCAAGCTCCAGATCTCGGTCCCAAGACCTGGAATGGCTGAATCCATGCCCCCACCAC TATCCTCACTCCGCTCGCACTCCCCTGCATTGCTATAAATCCCACTGCATCTTGGCTCTG GCCCATCTAATCCGCCAAGGAACCATGGCCCGAGCTCCCAAATCCGCCGGCATTGCCCTC TCCCTCCTGCTGCTGGCAGCCGCCGCCAAAGCCTCGGCCTTTCCTCTCCTCAACTCCTCG CTCCCCGACCCCGCTGCCGTCGTCGCCGACTTGCACAGCAAAGGTTTCGCTGACGCTGAA TGTGCGATGGCTATCACGGGCAGCAAGGTGGCAACGTCGCGGCGGCGGATGCAGGAGTCC GGCGGCGGCGGCGGCGGCGGCGGCGGCGGGTGCTTGACGGGCAACCCAATCGACGACTGC TGGCGGTGCGCGGCATCGGGTTCGGGCGCAACGCGCTGGGCGGCAAGGGCGGGCCGGTGT ACGTGGTGACGGACCCGTCGGACCGCGACCCCGTGAACCCGTCCCCTGGCACGCTCCGGC ACGCCGCCATCCAGGAGGGCCCGCTGTGGATCGTGTTCGCGTCGGACATGGCCATCCGGC TGAACGAGGAGCTGCTGGTGAACAGCTACAAGACGATCGACGGGCGCGGCGCGCGCGTGC ACGTGGGCGGCGGCGGCGCGTGCATCACGCTGCAGTACGTGTCGAACGTGATCATCCACA ACGTGCACGTGCACGACTGCGTGCCGGCGGGGAACGCCGACGTGCGGTCGTCGCCGACGC ACTACGGGTGGCGCACGCGGTCGGACGGCGACGGCATCTCGCTGTTCGGCGCGCGGGACG TGTGGGTGGACCACTGCGCGCTGTGGCGGTGCGCGGACGGGCTGGTGGACGCCATCATGG GGTCCACCGCCATCACCGTGTCCAACAGCTACTTCGCGCACCACGACGAGGTGATGCTGC TGGGCGCCAGCGACGCGTACCTGCCCGACTCCGGGATGCAGGTCACCATCGCCTTCAACC GGTTCGGCCCGGGGCTGGTGCAGCGGATGCCCCGCTGCCGACGCGGCTACTTCCACATCG TCAACAACGACTACACGTCGTGGGAGATGTACGCCATCGGCGGCAGCGCCGGCCCCACCA TCAACAGCCAGGGCAACCGCTACATCGCGCCGGCCGACCCCAACGCCAAGGAGGTGACGA AGCGGGTGGAGACGGCGGAGGGGCAGTGGGCCGGGTGGAACTGGCGGACGGAGGGCGACA TGATGGTGAACGGCGCCTTCTTCGTGCCTTCCGGCGAGGGGATGGAGGACATCTACGGCA AGGCCTCCAGCACCGACCCCAAGTCGTCCGCGCTCGTCGACGTGCTCACGCAGAACGCCG GCGTCCTCGGCGACCCCAGGAACGACGCCGAAGAAACCGGGTACAGGGGCGTCAACTACG CCGGCGGGAGAACTGGCGGCGGCGGCGGCTACGGATACGGCTACCTCGGGATGGTCTACG CCGGCGGCGGCGACCAGAGATGGAGATCGCACTCGGCGCTGTCACTGGTTTCTTCAGCTA TCACCGTCGTTGCGCTCGGATGCTTGCATTTGTTGTAACATGTAGACGTGTGATTCTCAG TTGGAAAAGTTAGCAAGATGGTGGGGAAGATTGTAGCTGGGGTAGCAGTAGGAGGAGCGG GGGTAGGCAGGCAACAGAAACCCTGTGTGAAGTTGCACATGGGTATTGGGTGGGAGGATA TTGCCAAGCCAGTCACTGTACTTCTTACAAGGAGAAATGGACGACTCATTCTAACTTTAG AA