Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032805_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:238804856:238806821:-1 gene:Zm00001d032805 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shugoshin-1

Sequence

ATGGAGGTGGACGCGCCCGTCCTCGCGCCCCAACAGGCCGTCACGCCCCCAGCGGCCGCG
CTGGCCAAGAAGACGCTTGCATCAGACGTGACGGCGACCCCCAAGTCCAGGGTCACGAGG
AGGAAGACGCTCTGCGACATCACCAACCTGAGCAAGCGCGAGCCGGTCGACGTGCCGGGC
GAGCCGGCGTGCCCGGAGGCGCCGGCACCGGCGGACGCGGGCGGCCTTGAGGGGTTTGCG
CAGCTAGTCGAGGAGAAAGCGGAACTCGTGAGGCTCCTCGCGGCGAGAGACGAGATCATA
GAGCTGAGCCGGGCTGAGATTCAGAAGCTGCGCCTTGCCAACTGGGAACTTGGGCGGGCC
CATTCCCAGTTGATGGCGGAGGTTAACCTCGGAAGAAAAAGGTTGAAAGCGTTGCAACAT
GAGCTTGCGTGCTCAAGAGCCAGCCTTAAAGCAAAAGCGTCTGAACTGGAGGATGTGAAG
AAGACGATGCAGCGGCGCAACGCACCTGTGCAAAGGACGCAGCATCTGGGTCCTGACAGA
GCTGTGCAGACCAGGGATGGAGATGTAGTCGATGCGGAGCCCGCTTCGGACGCATCGTCT
GCGAGGAGCATCCAGAGGGCCGGGAACGCCAGCAGGAAACGAGTGCTGAGATCTCGATCT
CTAGGACCTACGGCATCTTCGAAACCGATGCTTTCGAAGGATAGGGATGCCTCTCAGAGA
CGGAAGTCCATGAGAACACCCGAGTTGAGCAGCCGCACGGAGGACTTGTTCGAGATAGAG
GACGTCCAGCTCGCAATCGGCAGCTGCAAGATCGATCCAGAGAGTGCTTCCGGCAGCGAG
AAGCCTGGGCACCCGTTCTTGCGCAGATCATCTCTTGGAAGGCCGATGCGGCAGGCCAGG
GAACGAGTCACCACCTACAAGGAGATGCCTCTCCATGTTAAACTCAGGAGGCCCTAG

Peptide Sequence

PEP ID

Zm00001d032805_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:238804856:238806821:-1 gene:Zm00001d032805 transcript:Zm00001d032805_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shugoshin-1

Sequence

MEVDAPVLAPQQAVTPPAAALAKKTLASDVTATPKSRVTRRKTLCDITNLSKREPVDVPG
EPACPEAPAPADAGGLEGFAQLVEEKAELVRLLAARDEIIELSRAEIQKLRLANWELGRA
HSQLMAEVNLGRKRLKALQHELACSRASLKAKASELEDVKKTMQRRNAPVQRTQHLGPDR
AVQTRDGDVVDAEPASDASSARSIQRAGNASRKRVLRSRSLGPTASSKPMLSKDRDASQR
RKSMRTPELSSRTEDLFEIEDVQLAIGSCKIDPESASGSEKPGHPFLRRSSLGRPMRQAR
ERVTTYKEMPLHVKLRRP

Transcript Sequence

Transcript ID

Zm00001d032805_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:238804856:238806821:-1 gene:Zm00001d032805 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shugoshin-1

Sequence

ACCAAAGTTCCCCTACTCTCTCTGGATCTCACTTCCTCTATCCGACTTTCTCATCGCTTG
GCGCGCCCTCCCATCGCCGTGATTGACGAACAGCCCATGGAGGTGGACGCGCCCGTCCTC
GCGCCCCAACAGGCCGTCACGCCCCCAGCGGCCGCGCTGGCCAAGAAGACGCTTGCATCA
GACGTGACGGCGACCCCCAAGTCCAGGGTCACGAGGAGGAAGACGCTCTGCGACATCACC
AACCTGAGCAAGCGCGAGCCGGTCGACGTGCCGGGCGAGCCGGCGTGCCCGGAGGCGCCG
GCACCGGCGGACGCGGGCGGCCTTGAGGGGTTTGCGCAGCTAGTCGAGGAGAAAGCGGAA
CTCGTGAGGCTCCTCGCGGCGAGAGACGAGATCATAGAGCTGAGCCGGGCTGAGATTCAG
AAGCTGCGCCTTGCCAACTGGGAACTTGGGCGGGCCCATTCCCAGTTGATGGCGGAGGTT
AACCTCGGAAGAAAAAGGTTGAAAGCGTTGCAACATGAGCTTGCGTGCTCAAGAGCCAGC
CTTAAAGCAAAAGCGTCTGAACTGGAGGATGTGAAGAAGACGATGCAGCGGCGCAACGCA
CCTGTGCAAAGGACGCAGCATCTGGGTCCTGACAGAGCTGTGCAGACCAGGGATGGAGAT
GTAGTCGATGCGGAGCCCGCTTCGGACGCATCGTCTGCGAGGAGCATCCAGAGGGCCGGG
AACGCCAGCAGGAAACGAGTGCTGAGATCTCGATCTCTAGGACCTACGGCATCTTCGAAA
CCGATGCTTTCGAAGGATAGGGATGCCTCTCAGAGACGGAAGTCCATGAGAACACCCGAG
TTGAGCAGCCGCACGGAGGACTTGTTCGAGATAGAGGACGTCCAGCTCGCAATCGGCAGC
TGCAAGATCGATCCAGAGAGTGCTTCCGGCAGCGAGAAGCCTGGGCACCCGTTCTTGCGC
AGATCATCTCTTGGAAGGCCGATGCGGCAGGCCAGGGAACGAGTCACCACCTACAAGGAG
ATGCCTCTCCATGTTAAACTCAGGAGGCCCTAGAGGTTGTCAGGTTTTTAGCCAACGATT
CTTTGGTGTGTTTCTGCATCTAGTCAAATGCAGATAGTGTGTAGTATCTCTCCGTGTGAA
AATTTTGTGTGCGTTTGGCTTATCGGCATTGATACCTGGTGAAGGGTGCTGTGTAATCTA
TTTATCCTGTTTGTGATTCTAGTGTTGATCCAGTGAAGAAATGTCGCAACT