Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032754_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:237444154:237451532:-1 gene:Zm00001d032754 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leunig-related4 description: leunig-related4
Sequence

ATGGACCTCCCCGAGAGCTCTGTCCCCCGCGCAGACAAGGGCCCGGCCCCTCGCCGTCTT
TGCCCCGTCGACCGCGAGGAGCTGGTGCGCGCCATGGCACAGTCGCTCTACTCGCTCGGG
TACAGGCGGGCGGCGGCCGCGCTCGAGGCGGAGTCCGGCGTGCCACTGTACCCGCCGGAG
CATGACCGCCTGCTGCTGGAAGTGATGGCCGGTCAGTGGGACGCGTCCGCGGAGATCGTC
CGCTCGGTCGCCGGCGTCGGCGAAGCGGACCGCACGGTCGCGGAGTTCCTGGTGTGGAGG
GGCTACTACTTGGAGCTCCTGGGGATGCGCGGTGACGCTGGCCTGCGCCGGGCGAGGGAG
GTGCTACGGCGTCGGATTGCGCCGCTCGGCGTCGACAGGAGGTGCGTACACTTGCTGGCG
CGCGCCATGGTCTCCAGCGAGGGGGCCGTTGCGCCGGAGGCCGTGGTTGGGTGGAGGATT
GCGGTGTTCTTGGATTTGGTCGAGGTGTTGCCACCATGGTTCCATGTGGCTAGTGGGCGG
TTAGAGCATTTGGTGGAGAGTGCGGTAACCAAGCAAGTAGAATCTTGTATATATCACAAT
TTGCCGGATGAGATCACTCTGTTTGAAGATCATAGGTGCCATGAAGAGCATATCCCCTCC
CAATGTGCACAGATATTATGTGGTCATAATAATGAAGTTTGGTTTGTAAGGTTCTCAAAT
AATGGAAGCTACCTGGTGTCATCTTCAAGTGATTGCACTGCCATAATTTGGAAGGTGGAA
AATGATGATACATTGACCAAGAAGCACTGCCTCCAGGGTCACGAAAAACCAATTTCCTTT
GCTTCCTGGAGCCCAAATGACAGAATGCTGCTCACTTGTGGTACTGGTGAATCATTAAAA
CTGTGGAATGTTGATACTGGTGAATGTAACCTTAAATTCAGAGGCTCAGCAGACTGCATC
ATCAGTTCATGTGCATGGTTTCCTAATTCGGAGAAAATAGTATGTGCCAGCTCGGAGCCT
GCAAGTGCTCCAAATAGGATCTTCACTTGTGATCTAGAAGGCCAAAATCTGGAAGTATGG
GCTGGAGATAGAATACCAAAAGTCAGTGATCTCGCTGTGACACCTGATGGCCGACACCTA
ATCTTTGTATCTTGCAACGATATCTGGATTAGGGAACTTCCAAGGGGGCGGGAATGGAGA
TTTCGTGAGAAGCAGACGATTTCATCTCTTTCTCTCTCAGGTGATGGGCAGTCACTCATT
GTGAACCTTAACAGTCAGGAGATTCATCTGTGGAAAATTAATGAAAGTTGTACTGTGCCT
GAAAAGTTCATGGGGCACAAGCAAGACAAGTTTGTGATTAGGTCTTGCTTTGGTGGTTCA
AACTCTTCGTTCATTGCTAGTGGCAGTGAGGATTCACAGGTCTACATTTGGAAGAGGCAC
GTGGAGATGCCGATTAAGGTTCTACATGGCCACACGATGATTGTGAACTGTGTAAGCTGG
AATCCTGCAAGGCCCCACATGCTGGCTTCTGCTAGCGACGACCGCACGGTTCGAATATGG
GTAGGGCGCAAAAATGCAACAAAGTAA

Peptide Sequence

PEP ID

Zm00001d032754_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:237444154:237451532:-1 gene:Zm00001d032754 transcript:Zm00001d032754_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leunig-related4 description: leunig-related4
Sequence

MDLPESSVPRADKGPAPRRLCPVDREELVRAMAQSLYSLGYRRAAAALEAESGVPLYPPE
HDRLLLEVMAGQWDASAEIVRSVAGVGEADRTVAEFLVWRGYYLELLGMRGDAGLRRARE
VLRRRIAPLGVDRRCVHLLARAMVSSEGAVAPEAVVGWRIAVFLDLVEVLPPWFHVASGR
LEHLVESAVTKQVESCIYHNLPDEITLFEDHRCHEEHIPSQCAQILCGHNNEVWFVRFSN
NGSYLVSSSSDCTAIIWKVENDDTLTKKHCLQGHEKPISFASWSPNDRMLLTCGTGESLK
LWNVDTGECNLKFRGSADCIISSCAWFPNSEKIVCASSEPASAPNRIFTCDLEGQNLEVW
AGDRIPKVSDLAVTPDGRHLIFVSCNDIWIRELPRGREWRFREKQTISSLSLSGDGQSLI
VNLNSQEIHLWKINESCTVPEKFMGHKQDKFVIRSCFGGSNSSFIASGSEDSQVYIWKRH
VEMPIKVLHGHTMIVNCVSWNPARPHMLASASDDRTVRIWVGRKNATK

Transcript Sequence

Transcript ID

Zm00001d032754_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:237444154:237451532:-1 gene:Zm00001d032754 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leunig-related4 description: leunig-related4
Sequence

ACAGTTTCTGAGAGAAAAGAAACCGACAGCTCGACCCGGATCATCTCTGACTCCCTGCAG
AATCAATCATCGGTTCCACACTATCTCTTCCAAAATTTCGTTGATAACACCTGGCAAGTT
TTTTATCGCACCTAAAATTCTATCTGTCTGTTGTCTGGCGCTGCTGTATCACTCTGAATT
TTTGGTTCTGGCCCAAATCTTGTTCTTTTTCCGGTTCTTCTGATCCCGTCTTTATCCTCT
CAAATCCACTAAACCACTCCAAAGATAGAATTTTTCTGCATCCGAAGCCCAGATATTTTT
TTCCTTCGGTTTGTTCCGGCGGCAGGGGTGCGAAATCCCTCAAGCTGGCAACCCCGGCGC
GGCCATGGACCTCCCCGAGAGCTCTGTCCCCCGCGCAGACAAGGGCCCGGCCCCTCGCCG
TCTTTGCCCCGTCGACCGCGAGGAGCTGGTGCGCGCCATGGCACAGTCGCTCTACTCGCT
CGGGTACAGGCGGGCGGCGGCCGCGCTCGAGGCGGAGTCCGGCGTGCCACTGTACCCGCC
GGAGCATGACCGCCTGCTGCTGGAAGTGATGGCCGGTCAGTGGGACGCGTCCGCGGAGAT
CGTCCGCTCGGTCGCCGGCGTCGGCGAAGCGGACCGCACGGTCGCGGAGTTCCTGGTGTG
GAGGGGCTACTACTTGGAGCTCCTGGGGATGCGCGGTGACGCTGGCCTGCGCCGGGCGAG
GGAGGTGCTACGGCGTCGGATTGCGCCGCTCGGCGTCGACAGGAGGTGCGTACACTTGCT
GGCGCGCGCCATGGTCTCCAGCGAGGGGGCCGTTGCGCCGGAGGCCGTGGTTGGGTGGAG
GATTGCGGTGTTCTTGGATTTGGTCGAGGTGTTGCCACCATGGTTCCATGTGGCTAGTGG
GCGGTTAGAGCATTTGGTGGAGAGTGCGGTAACCAAGCAAGTAGAATCTTGTATATATCA
CAATTTGCCGGATGAGATCACTCTGTTTGAAGATCATAGGTGCCATGAAGAGCATATCCC
CTCCCAATGTGCACAGATATTATGTGGTCATAATAATGAAGTTTGGTTTGTAAGGTTCTC
AAATAATGGAAGCTACCTGGTGTCATCTTCAAGTGATTGCACTGCCATAATTTGGAAGGT
GGAAAATGATGATACATTGACCAAGAAGCACTGCCTCCAGGGTCACGAAAAACCAATTTC
CTTTGCTTCCTGGAGCCCAAATGACAGAATGCTGCTCACTTGTGGTACTGGTGAATCATT
AAAACTGTGGAATGTTGATACTGGTGAATGTAACCTTAAATTCAGAGGCTCAGCAGACTG
CATCATCAGTTCATGTGCATGGTTTCCTAATTCGGAGAAAATAGTATGTGCCAGCTCGGA
GCCTGCAAGTGCTCCAAATAGGATCTTCACTTGTGATCTAGAAGGCCAAAATCTGGAAGT
ATGGGCTGGAGATAGAATACCAAAAGTCAGTGATCTCGCTGTGACACCTGATGGCCGACA
CCTAATCTTTGTATCTTGCAACGATATCTGGATTAGGGAACTTCCAAGGGGGCGGGAATG
GAGATTTCGTGAGAAGCAGACGATTTCATCTCTTTCTCTCTCAGGTGATGGGCAGTCACT
CATTGTGAACCTTAACAGTCAGGAGATTCATCTGTGGAAAATTAATGAAAGTTGTACTGT
GCCTGAAAAGTTCATGGGGCACAAGCAAGACAAGTTTGTGATTAGGTCTTGCTTTGGTGG
TTCAAACTCTTCGTTCATTGCTAGTGGCAGTGAGGATTCACAGGTCTACATTTGGAAGAG
GCACGTGGAGATGCCGATTAAGGTTCTACATGGCCACACGATGATTGTGAACTGTGTAAG
CTGGAATCCTGCAAGGCCCCACATGCTGGCTTCTGCTAGCGACGACCGCACGGTTCGAAT
ATGGGTAGGGCGCAAAAATGCAACAAAGTAAACGCTGTTGAAGTGTGAAGTTTTGTATGT
CTGTGTAAATAGTTGTACATCTGGACTGCATCCACAAACCTGTTTGGGACAATGCTCTGT
TCTTCACCCCTGATGAATATGTCGTCGTAGCTATTTGTTCAGAAATAAACCTGCAACAGC
CATAGGTAGCCGGTGCTGCTGTGTCCAGATGTGTGCCTGGCTAACCGGTGAGTTTTGACA
TGTGTACAGGACAAAGATGCATCAGAACTTTGTACATCTTGTTAGTATATGCCTTGGACA
CTCGAAGTGCTGAAATATGCCTTCTGTTGCTGTGGATCTAGTGTTCGTGTCCTTT