Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032734_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:1:236584903:236591767:1 gene:Zm00001d032734 gene_biotype:protein_coding transcript_biotype:protein_coding description:no pollen germination related 2
Sequence	ATGGCTATGGAGTGCCTGTGCTCTGGTGAGCAGTTGAAGGCGTCAGATGAGACCATGCGG TCATCTGATTCTACGATCACAAAGGATTTCTCGGCCAGTGGGTACTCTTCTCGGAATGGA GAGATTGAGCAGTACCTTGATAATGGCAACATAGAGGAAGCCGAGTTGTCGCTCCGGGAG GGCATTTGCCTAAATTATGAGGAAGCAAGGGCATTGCTAGGAAGGCTAGAATATCAACGG GGTCATGTAGAGGCAGCACTCCGTGTCTTTGATGGGATAGACATATCTGCATTAGTTCCT AAGATGAAAATCTCAATTGCTAGAAAAACAGACCGTCGGAAGACTCATTCACAGTGGGAT TCCCCACCAATGCCCTTGCATGCTGTCAGCCTTCTCATGGAGGCCATATATCTTAAAGCA AGAGCACTTCATGATCTTGGGAAAGATAAAGAAGCTGCACAAGAATGTAGAATGATATTG GATATTGTGGAAGCAGCTGTACCTGAGGGCTTGCCAGCAGGCTTTGGGAAAGGCTGTAAA TTGAACGAAATAATATGCAAGGCTGTAGAGTTGCTCCCTGAGCTGTGGAAATCAGGGGGG TTTTCACTTGAAACCATTTCTTCATATAGGAGGTCACTTCTTAATAATTGGAATCTTGAT GGAGAGACAATAGCAAGGATACAAAAGAAATTTGCTGTTTTTCTCCTATATAGTGGTTGT GAAGCACGCCCTCCAAATCTTCATTCTCAGTTGGACGGTTCATTTGTACCTCGCAACAAT ATTGAAGAGGCTATCCTTCTTTTGATGATTCTTTTGAGGAAGTCCAATCTCAAGAGGATT GAGCAAGATCCCTCTGTGATGCATCACCTTACTTTTGCACTGTCCATGTCAGGACAGCTA ATTCCACTGGCTGGACAGTTTGAAGAATTGTTACCTGGTGTGTTAGACAAAAAAGAATGG TTGTACAGCGTTGCATTGTGTTATTTAGCAGAAGAAGATGATCTGAGTGCCCTGAATCTA CTCAAAATTATACTAAAATCTGGAGAGGACTCCGTTCAACTCATAGAACTGCTTCTAGCT TCAAAGGCTTGCATTGAGATGAGTATTCATACTGAAGGTGCTTTTTATGCAAGGAGAGCC ATTGCAAATATGCAGGGAGGATGCAAACCAATGGCAGGACTTGCAAACCTATTGCTTGGT GTTGCACTTTCTAATCAGGCTAGAAGTGCAATATCTGATACAGATAGAGCTTCTTGGCAG TGCGAAGCACTGGAAGCCCTTGGGAATGCTGAAAAAAATATACATGGGAAAGATTCTAGG GCATTATACAGTCTCAGCCTTGAAAATGCTGTGCAGAGGAAATTAGAATTAGCTGCCTTT TATGCAAAGAGGCTGGTGAAACTTGAGGCTGGATCAGAGTTGAGGAGTTGGCTCCTTTTA GCTCGAATACTTAGTGCTCAAAAGCTGTTTGCTGATGCTGAAACAGTTGTTGATGCTGCT CTAGATCAAACTGGGAAATGGTGTCAAGGAGATTTATTGCGAACCAAAGCCAGAATTCAG GCTGCACAGGGGCAATTTAGAGAAGCGGTTGAAACATACACCCAACTTCTTGCTATCATT CAACTTAGAACGAAAAGTTTAACTGCTGGAGTTTGCTTGCCAAAGGTATGGCACAATGGA GGGATGCAGAGGTTTGTGTATTGA

Peptide Sequence

PEP ID	Zm00001d032734_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:1:236584903:236591767:1 gene:Zm00001d032734 transcript:Zm00001d032734_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:no pollen germination related 2
Sequence	MAMECLCSGEQLKASDETMRSSDSTITKDFSASGYSSRNGEIEQYLDNGNIEEAELSLRE GICLNYEEARALLGRLEYQRGHVEAALRVFDGIDISALVPKMKISIARKTDRRKTHSQWD SPPMPLHAVSLLMEAIYLKARALHDLGKDKEAAQECRMILDIVEAAVPEGLPAGFGKGCK LNEIICKAVELLPELWKSGGFSLETISSYRRSLLNNWNLDGETIARIQKKFAVFLLYSGC EARPPNLHSQLDGSFVPRNNIEEAILLLMILLRKSNLKRIEQDPSVMHHLTFALSMSGQL IPLAGQFEELLPGVLDKKEWLYSVALCYLAEEDDLSALNLLKIILKSGEDSVQLIELLLA SKACIEMSIHTEGAFYARRAIANMQGGCKPMAGLANLLLGVALSNQARSAISDTDRASWQ CEALEALGNAEKNIHGKDSRALYSLSLENAVQRKLELAAFYAKRLVKLEAGSELRSWLLL ARILSAQKLFADAETVVDAALDQTGKWCQGDLLRTKARIQAAQGQFREAVETYTQLLAII QLRTKSLTAGVCLPKVWHNGGMQRFVY

Transcript Sequence

Transcript ID	Zm00001d032734_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:236584903:236591767:1 gene:Zm00001d032734 gene_biotype:protein_coding transcript_biotype:protein_coding description:no pollen germination related 2
Sequence	GGATGGTAGGAAAAGGAAGGGGAAATTCAGGAATTCTCTCAGGCGTATGGCTATGGAGTG CCTGTGCTCTGGTGAGCAGTTGAAGGCGTCAGATGAGACCATGCGGTCATCTGATTCTAC GATCACAAAGGATTTCTCGGCCAGTGGGTACTCTTCTCGGAATGGAGAGATTGAGCAGTA CCTTGATAATGGCAACATAGAGGAAGCCGAGTTGTCGCTCCGGGAGGGCATTTGCCTAAA TTATGAGGAAGCAAGGGCATTGCTAGGAAGGCTAGAATATCAACGGGGTCATGTAGAGGC AGCACTCCGTGTCTTTGATGGGATAGACATATCTGCATTAGTTCCTAAGATGAAAATCTC AATTGCTAGAAAAACAGACCGTCGGAAGACTCATTCACAGTGGGATTCCCCACCAATGCC CTTGCATGCTGTCAGCCTTCTCATGGAGGCCATATATCTTAAAGCAAGAGCACTTCATGA TCTTGGGAAAGATAAAGAAGCTGCACAAGAATGTAGAATGATATTGGATATTGTGGAAGC AGCTGTACCTGAGGGCTTGCCAGCAGGCTTTGGGAAAGGCTGTAAATTGAACGAAATAAT ATGCAAGGCTGTAGAGTTGCTCCCTGAGCTGTGGAAATCAGGGGGGTTTTCACTTGAAAC CATTTCTTCATATAGGAGGTCACTTCTTAATAATTGGAATCTTGATGGAGAGACAATAGC AAGGATACAAAAGAAATTTGCTGTTTTTCTCCTATATAGTGGTTGTGAAGCACGCCCTCC AAATCTTCATTCTCAGTTGGACGGTTCATTTGTACCTCGCAACAATATTGAAGAGGCTAT CCTTCTTTTGATGATTCTTTTGAGGAAGTCCAATCTCAAGAGGATTGAGCAAGATCCCTC TGTGATGCATCACCTTACTTTTGCACTGTCCATGTCAGGACAGCTAATTCCACTGGCTGG ACAGTTTGAAGAATTGTTACCTGGTGTGTTAGACAAAAAAGAATGGTTGTACAGCGTTGC ATTGTGTTATTTAGCAGAAGAAGATGATCTGAGTGCCCTGAATCTACTCAAAATTATACT AAAATCTGGAGAGGACTCCGTTCAACTCATAGAACTGCTTCTAGCTTCAAAGGCTTGCAT TGAGATGAGTATTCATACTGAAGGTGCTTTTTATGCAAGGAGAGCCATTGCAAATATGCA GGGAGGATGCAAACCAATGGCAGGACTTGCAAACCTATTGCTTGGTGTTGCACTTTCTAA TCAGGCTAGAAGTGCAATATCTGATACAGATAGAGCTTCTTGGCAGTGCGAAGCACTGGA AGCCCTTGGGAATGCTGAAAAAAATATACATGGGAAAGATTCTAGGGCATTATACAGTCT CAGCCTTGAAAATGCTGTGCAGAGGAAATTAGAATTAGCTGCCTTTTATGCAAAGAGGCT GGTGAAACTTGAGGCTGGATCAGAGTTGAGGAGTTGGCTCCTTTTAGCTCGAATACTTAG TGCTCAAAAGCTGTTTGCTGATGCTGAAACAGTTGTTGATGCTGCTCTAGATCAAACTGG GAAATGGTGTCAAGGAGATTTATTGCGAACCAAAGCCAGAATTCAGGCTGCACAGGGGCA ATTTAGAGAAGCGGTTGAAACATACACCCAACTTCTTGCTATCATTCAACTTAGAACGAA AAGTTTAACTGCTGGAGTTTGCTTGCCAAAGGTATGGCACAATGGAGGGATGCAGAGGTT TGTGTATTGAAGATAAGATCCATCAGTCCTTATTCTGCATTGGCTTGGCATGCTACAGGA AAAATATATGAAGCAAAAGGTCTTAGAAAAGAAGCTTTGGGAGCTTTTTTCAGAGCCTTA GATCTTGATCCTAAACATGTCCCAAGTTTAATATCAACTGCCACTGTTCTACAACAACTT GGTGACAGGCCATTGCCTTCTATACGGTGCTTCCTGACTGATGCATTACAACTGGATAGA ACTAATCATGTTGCGTGGTTCAATCTTGGCCTTCTTTACAAAGAGGAAGGTGGCAGGTCA GCAGCTGAGGCTGCTGAATGCTTCCAAGCTGCTGCTTTTCTTAAAGAAACTGCACCTTCA GAACCTTTCAGATGACATCTACAGGGGCTATAGATGTAAGCTGCTGTATGTATTTTTGAT ATATTTCACTGATGAAATAGTGGATTACAGAGTTCTAAAAATGATCTTCTTGGGAGATCA CAGCATTGGAAACTGTTGGAAAAAATGTTTAACAATTCAATCTATAGTTCCAATTGTTGC CTGTATAGCAACAAGAAAGACGATGATCTTCGCCTTGTGTAGGAACAGTGCTTACTGTGA TATATATATATAGATAGATGACCAGTACATTGTGTATCTTGAGTAAAATGGTTTCACATA TAAGGTATCAGACTACTCTCTCCGTTTGTTAAGAATTTAGTCAAGATATAAAATATGTTC TGGGGT