Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032708_T026
CDS Infomation	cds chromosome:B73_RefGen_v4:1:235650444:235660702:-1 gene:Zm00001d032708 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A regulatory subunit B''alpha
Sequence	ATGGAGGTGGAGCCGGCGAGGAGGGACGCGGCAGCGCTGGACCCGGAGCTGCTGCAGCTG GCGGAGCTCGCGCCGGGCGCGCTTCGTGAGAACTCCATAGCTGATGCGCTGTATTCGCAG TGGCTCGTGCTACCCGAGACGACCAAGCTGGTGAAGTCTTTGATTGATGATGCAAAGACT GGTGCTGTGCTTAATGTTGCTGGAAGCTCTGCTAGCACAAATGCTGCTTCAAGTAGTTCT CTACCTTCGATGTTTCCTGCTGGTAGTGCTCCACCACTTTCTCCTAGGAGCACGTCTGGT TCCCCTCGTGTTATGAGACGAGGATCTGGAGCTGGACCATCATCCTTGGGCTCTCCATTA AAATTAGTTAGTGAACCAGTAAGAGAAGTTATACCTCAGTTTTACTTCAAGAATGGGCGT CCTCCCACAAAAGATTTGAAGGAGCAGTGCTTATCAAGAACAGATCACCTATTTTTTGGT GGTGGGGGACTTCAAGTTCAAGAATTCAGATCGGTCACGAAGGACATATGTAAACTTCCT TCATTCTTGTCTAGTGTCCTTTTCAAGAAAATCGATGTTGAATGCACTAGAACTGTCTCA AGGGATGCATTTGTTGAGTACTGGATTAACGACAATAAGGTTACAATGGATATGGCTAGT CAAATATTTGAAATATTAAGAAAGCCAGGTTACACATATCTCACCCAGGATGACTTCAAG CCTGTCCTGAAAGAACTACTGGCAACACACCCTGGCTTAGAGTTTTTACAAGGGACCCCC GAGTTTCAGGAGAGATATGCGGAGACTGTAATATACAGAATCTTTTACTCCATAAATAGA TCTGGGAATGGTCATCTGACTCTGAGAGAGCTCAAACGTGGAAATTTAATTGCTGCACTT CAGCAGTTAGATGAGGAAGAAGATATCAACAAAGTGTTGAGATATTTCTCATATGAACAC TTTTATGTGATCTACTGCAAATTCTGGGAGCTGGATGCAGACCACGATTTTTTGATTGAT AAGGAAAATCTCATCAAATATGGGAACCATTCGTTGACCTATAGAATAGTTGATAGAATT TTCGCACAGATCCCAAGGAAATTCACAAGCATGACAGAAGGAAAGATGGGTTATGAAGAC TTTGTTTACTTTATATTATCAGAGGAAGACAAATCATCTGAGCCTAGTCTTGAATATTGG TTTAAGTGCATCGATCTTGATGGTAATGGTATTTTAACTTTCAATGAAATGCAATTTTTC TACGAGGAGCAATTGCACCGAATGGAGTGCATGGCACAAGAGCCTGTGCTTTTTCTGGAC ATATTATGCCAGATGATTGATATGATTGGACCAGAGAATGAGAGCTATTTAACTCTACGG GACTTAAAACGGTGTAAACTCTCAGGAAACATATTCAATATTCTTTTCAATCTCAACAAG TTCATGGCATTTGAAACTCGTGATCCATTCCTCATTCGCCAGGAACGTGAAAATCCAACT CTAACTGAGTGGGACCGGTTTGCACATAGAGAATATATTAGATTGTCCATGGAAGAAGAT GGTGAGGATGCTTCAAATGGAAGTGGTGATGTGTGGGACGAATCACTTGAGGCTCCATTC TGA

Peptide Sequence

PEP ID	Zm00001d032708_P026
PEP Infomation	pep chromosome:B73_RefGen_v4:1:235650444:235660702:-1 gene:Zm00001d032708 transcript:Zm00001d032708_T026 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A regulatory subunit B''alpha
Sequence	MEVEPARRDAAALDPELLQLAELAPGALRENSIADALYSQWLVLPETTKLVKSLIDDAKT GAVLNVAGSSASTNAASSSSLPSMFPAGSAPPLSPRSTSGSPRVMRRGSGAGPSSLGSPL KLVSEPVREVIPQFYFKNGRPPTKDLKEQCLSRTDHLFFGGGGLQVQEFRSVTKDICKLP SFLSSVLFKKIDVECTRTVSRDAFVEYWINDNKVTMDMASQIFEILRKPGYTYLTQDDFK PVLKELLATHPGLEFLQGTPEFQERYAETVIYRIFYSINRSGNGHLTLRELKRGNLIAAL QQLDEEEDINKVLRYFSYEHFYVIYCKFWELDADHDFLIDKENLIKYGNHSLTYRIVDRI FAQIPRKFTSMTEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTFNEMQFF YEEQLHRMECMAQEPVLFLDILCQMIDMIGPENESYLTLRDLKRCKLSGNIFNILFNLNK FMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDGEDASNGSGDVWDESLEAPF

Transcript Sequence

Transcript ID	Zm00001d032708_T026
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:235650444:235660702:-1 gene:Zm00001d032708 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A regulatory subunit B''alpha
Sequence	CCCGCCGCTGCCGGCGCTCGATCCTACTTCGTTGCTCCTAGCTGATCCCGCTGAGCTCGG ATTTGGGCCCTTCCTCCCCGCCGGAACAGCGTCCGGACGCGCGGGGGCAGATCTGGGTTT TGGTGGCCCGCTTGGTGTATGAGAAGGCCTCCAGAGCTTGGAAGTAATGGAGGTGGAGCC GGCGAGGAGGGACGCGGCAGCGCTGGACCCGGAGCTGCTGCAGCTGGCGGAGCTCGCGCC GGGCGCGCTTCGTGAGAACTCCATAGCTGATGCGCTGTATTCGCAGTGGCTCGTGCTACC CGAGACGACCAAGCTGGTGAAGTCTTTGATTGATGATGCAAAGACTGGTGCTGTGCTTAA TGTTGCTGGAAGCTCTGCTAGCACAAATGCTGCTTCAAGTAGTTCTCTACCTTCGATGTT TCCTGCTGGTAGTGCTCCACCACTTTCTCCTAGGAGCACGTCTGGTTCCCCTCGTGTTAT GAGACGAGGATCTGGAGCTGGACCATCATCCTTGGGCTCTCCATTAAAATTAGTTAGTGA ACCAGTAAGAGAAGTTATACCTCAGTTTTACTTCAAGAATGGGCGTCCTCCCACAAAAGA TTTGAAGGAGCAGTGCTTATCAAGAACAGATCACCTATTTTTTGGTGGTGGGGGACTTCA AGTTCAAGAATTCAGATCGGTCACGAAGGACATATGTAAACTTCCTTCATTCTTGTCTAG TGTCCTTTTCAAGAAAATCGATGTTGAATGCACTAGAACTGTCTCAAGGGATGCATTTGT TGAGTACTGGATTAACGACAATAAGGTTACAATGGATATGGCTAGTCAAATATTTGAAAT ATTAAGAAAGCCAGGTTACACATATCTCACCCAGGATGACTTCAAGCCTGTCCTGAAAGA ACTACTGGCAACACACCCTGGCTTAGAGTTTTTACAAGGGACCCCCGAGTTTCAGGAGAG ATATGCGGAGACTGTAATATACAGAATCTTTTACTCCATAAATAGATCTGGGAATGGTCA TCTGACTCTGAGAGAGCTCAAACGTGGAAATTTAATTGCTGCACTTCAGCAGTTAGATGA GGAAGAAGATATCAACAAAGTGTTGAGATATTTCTCATATGAACACTTTTATGTGATCTA CTGCAAATTCTGGGAGCTGGATGCAGACCACGATTTTTTGATTGATAAGGAAAATCTCAT CAAATATGGGAACCATTCGTTGACCTATAGAATAGTTGATAGAATTTTCGCACAGATCCC AAGGAAATTCACAAGCATGACAGAAGGAAAGATGGGTTATGAAGACTTTGTTTACTTTAT ATTATCAGAGGAAGACAAATCATCTGAGCCTAGTCTTGAATATTGGTTTAAGTGCATCGA TCTTGATGGTAATGGTATTTTAACTTTCAATGAAATGCAATTTTTCTACGAGGAGCAATT GCACCGAATGGAGTGCATGGCACAAGAGCCTGTGCTTTTTCTGGACATATTATGCCAGAT GATTGATATGATTGGACCAGAGAATGAGAGCTATTTAACTCTACGGGACTTAAAACGGTG TAAACTCTCAGGAAACATATTCAATATTCTTTTCAATCTCAACAAGTTCATGGCATTTGA AACTCGTGATCCATTCCTCATTCGCCAGGAACGTGAAAATCCAACTCTAACTGAGTGGGA CCGGTTTGCACATAGAGAATATATTAGATTGTCCATGGAAGAAGATGGTGAGGATGCTTC AAATGGAAGTGGTGATGTGTGGGACGAATCACTTGAGGCTCCATTCTGAATGGCGTAAGT GTTTGCTAAATATT