Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032651_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:233132459:233135497:1 gene:Zm00001d032651 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 86B1
Sequence

ATGGACACCGCCGTCTCGCAAAACGCCACGGTTGCCGCGGCGGCCGGTGCCGGAAGCGGC
GGCGGGCTGGCGGGCCTGCTCCCGGAGGTGCAGACGCTGGAGGTGCTGGTGGCCGTGTCC
ATCTTCGTGGCCATCCACTCGCTACGGCAGCGGCGCACGCAGGGCTTGCCGACGTGGCCA
GTGGTGGGCATGCTCCCGTCGCTGCTCCTCGGCATCCGCGGCGACATGTACGAGTGGATC
ACGGGCGTGCTGAAGGCGCGCGGCGGCACGTTCACGTTCCGGGGGCCGTGGTTCACCAAC
CTCCAGTGCGTGGTGACGGCCGACCCGCGCAACCTGGAGCACCTCCTCAAGACCCGGTTC
GGCAGCTTCCCCAAGGGCCCCTACTTCCGCGACACGGTGCGGGACCTCCTGGGCGACGGC
ATCTTCGGCGCCGACGACGAGGCGTGGAGGCGGCAGCGCAGGGCGGCCAGCCTCGAGTTC
CACTCGGCCGAGTTCCGCGCGCTCACGGCCAGCTCGCTCGTGGAGCTGGTGCACGGCCGC
CTGCTGCCCGTGCTGGCCGGCGCGGAGGCCGCCGGCGCCGCCGTCGACCTCCAGGACGTG
CTCCTCCGCCTCACCTTCGACAACGTGTGCATGATCGCGTTCGGCGTGGACCCGGGCTGC
CTCCGCCCGGGCCTCCCCGAGATCCCGTTCGCCCGCGCGTTCGAGGACGCCACCGAGGCC
ACCACCCTCCGCTTCGTCACGCCCACCGCGGCGTGGCGCGCCATGCGCGCGCTCGGCGTC
GGGCACGAGCGCGTGCTCCGGCGCTCCCTGGCCGCCGTCGACGAGTTCGCGTACGACGTG
ATCCGCAGGCGCAGGGAGGAGCTCGGCGGCGACGACGCCGGGGCCGGGCGCAGGTCGTCG
GACCTGCTGACCGTGTTCACCAGGATGCGCGACGAGGACGGGCGGCCGTACACGGACAAG
TTCCTCCGCGACATCTGCGTCAACTTCATCCTGGCCGGGCGCGACACCTCGTCCGTGGCG
CTCGCGTGGTTCTTCTGGCTGCTCCGCAGGAACCCCGGCGCGGAGGCCAGGATCCTGGAG
GAGATCGAGGGGATCCTCGCGGCGCGGAAGGAGGCCGGGGAGGTGGTCGTGGAGGAGGAG
GTCGTGTTCAGGCCCGAGGAGGTGAAGCGGATGGAGTACCTCCACGCCGCGCTCTCCGAG
GCGCTCCGCCTCTACCCGTCCGTCCCCGTCGACCACAAGGAGGTCGTGGAGGACGAGGTG
TTTCCGGACGGGACGGTGCTGAAGAAGGGCACCAAGGTGGTCTACGCCATGTACTCCATG
GGGCGGATGGAGAGCATCTGGGGCGACGACTGCCGGGAGTACAGGCCGGAGCGGTGGCTC
CGGGACGGCCGCTTCATGAGCGAGTCCGCCTACAAGTTCACCGCCTTCAACGGCGGCCCG
CGCCTGTGCCTCGGCAAGGACTTCGCCTACTACCAGATGAAGTTCGCCGCCGCCTCCATC
CTCCGCCGCTACCGCGTCGACGTCGTCGAGGGCCACCCCGTCGCGCCCAAGATGGCGCTC
ACCATGTACATGAAGTACGGCCTCAAGGTCACGCTGACCAAGAGAGACAAGACCAAGCTC
TGA

Peptide Sequence

PEP ID

Zm00001d032651_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:233132459:233135497:1 gene:Zm00001d032651 transcript:Zm00001d032651_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 86B1
Sequence

MDTAVSQNATVAAAAGAGSGGGLAGLLPEVQTLEVLVAVSIFVAIHSLRQRRTQGLPTWP
VVGMLPSLLLGIRGDMYEWITGVLKARGGTFTFRGPWFTNLQCVVTADPRNLEHLLKTRF
GSFPKGPYFRDTVRDLLGDGIFGADDEAWRRQRRAASLEFHSAEFRALTASSLVELVHGR
LLPVLAGAEAAGAAVDLQDVLLRLTFDNVCMIAFGVDPGCLRPGLPEIPFARAFEDATEA
TTLRFVTPTAAWRAMRALGVGHERVLRRSLAAVDEFAYDVIRRRREELGGDDAGAGRRSS
DLLTVFTRMRDEDGRPYTDKFLRDICVNFILAGRDTSSVALAWFFWLLRRNPGAEARILE
EIEGILAARKEAGEVVVEEEVVFRPEEVKRMEYLHAALSEALRLYPSVPVDHKEVVEDEV
FPDGTVLKKGTKVVYAMYSMGRMESIWGDDCREYRPERWLRDGRFMSESAYKFTAFNGGP
RLCLGKDFAYYQMKFAAASILRRYRVDVVEGHPVAPKMALTMYMKYGLKVTLTKRDKTKL

Transcript Sequence

Transcript ID

Zm00001d032651_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:233132459:233135497:1 gene:Zm00001d032651 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 86B1
Sequence

CTCACACACACAGCGCGCGCGCACGACACGAACTAAGGCCAAGCCGCCGCGCCGCCGCCA
CCTTTCTTTGCCCAGCCTACGCCAACACCATCCGTGAGCGCCACCATGGACACCGCCGTC
TCGCAAAACGCCACGGTTGCCGCGGCGGCCGGTGCCGGAAGCGGCGGCGGGCTGGCGGGC
CTGCTCCCGGAGGTGCAGACGCTGGAGGTGCTGGTGGCCGTGTCCATCTTCGTGGCCATC
CACTCGCTACGGCAGCGGCGCACGCAGGGCTTGCCGACGTGGCCAGTGGTGGGCATGCTC
CCGTCGCTGCTCCTCGGCATCCGCGGCGACATGTACGAGTGGATCACGGGCGTGCTGAAG
GCGCGCGGCGGCACGTTCACGTTCCGGGGGCCGTGGTTCACCAACCTCCAGTGCGTGGTG
ACGGCCGACCCGCGCAACCTGGAGCACCTCCTCAAGACCCGGTTCGGCAGCTTCCCCAAG
GGCCCCTACTTCCGCGACACGGTGCGGGACCTCCTGGGCGACGGCATCTTCGGCGCCGAC
GACGAGGCGTGGAGGCGGCAGCGCAGGGCGGCCAGCCTCGAGTTCCACTCGGCCGAGTTC
CGCGCGCTCACGGCCAGCTCGCTCGTGGAGCTGGTGCACGGCCGCCTGCTGCCCGTGCTG
GCCGGCGCGGAGGCCGCCGGCGCCGCCGTCGACCTCCAGGACGTGCTCCTCCGCCTCACC
TTCGACAACGTGTGCATGATCGCGTTCGGCGTGGACCCGGGCTGCCTCCGCCCGGGCCTC
CCCGAGATCCCGTTCGCCCGCGCGTTCGAGGACGCCACCGAGGCCACCACCCTCCGCTTC
GTCACGCCCACCGCGGCGTGGCGCGCCATGCGCGCGCTCGGCGTCGGGCACGAGCGCGTG
CTCCGGCGCTCCCTGGCCGCCGTCGACGAGTTCGCGTACGACGTGATCCGCAGGCGCAGG
GAGGAGCTCGGCGGCGACGACGCCGGGGCCGGGCGCAGGTCGTCGGACCTGCTGACCGTG
TTCACCAGGATGCGCGACGAGGACGGGCGGCCGTACACGGACAAGTTCCTCCGCGACATC
TGCGTCAACTTCATCCTGGCCGGGCGCGACACCTCGTCCGTGGCGCTCGCGTGGTTCTTC
TGGCTGCTCCGCAGGAACCCCGGCGCGGAGGCCAGGATCCTGGAGGAGATCGAGGGGATC
CTCGCGGCGCGGAAGGAGGCCGGGGAGGTGGTCGTGGAGGAGGAGGTCGTGTTCAGGCCC
GAGGAGGTGAAGCGGATGGAGTACCTCCACGCCGCGCTCTCCGAGGCGCTCCGCCTCTAC
CCGTCCGTCCCCGTCGACCACAAGGAGGTCGTGGAGGACGAGGTGTTTCCGGACGGGACG
GTGCTGAAGAAGGGCACCAAGGTGGTCTACGCCATGTACTCCATGGGGCGGATGGAGAGC
ATCTGGGGCGACGACTGCCGGGAGTACAGGCCGGAGCGGTGGCTCCGGGACGGCCGCTTC
ATGAGCGAGTCCGCCTACAAGTTCACCGCCTTCAACGGCGGCCCGCGCCTGTGCCTCGGC
AAGGACTTCGCCTACTACCAGATGAAGTTCGCCGCCGCCTCCATCCTCCGCCGCTACCGC
GTCGACGTCGTCGAGGGCCACCCCGTCGCGCCCAAGATGGCGCTCACCATGTACATGAAG
TACGGCCTCAAGGTCACGCTGACCAAGAGAGACAAGACCAAGCTCTGAACTGTTGGTGCC
GAGCTGAGCTTGCCAATAAGACTCTGAGACTGAAGAGAGATATACAGTATGAAAGAAGCA
GGGCTCTTCATTTGTTTCATTTACATCTAGTATAGAACTTCTATATATATGTATAGATAC
ATATGTATATGTGTTGGCAAAACGCTTGACCTTCAGGTGATGTAACCGGTAATATTGTAG
CAGTATTATTTCAATACAACAGCAGCAAGATGCCATGGCATCTGTTTGGAA