Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032646_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:233067573:233068723:-1 gene:Zm00001d032646 gene_biotype:protein_coding transcript_biotype:protein_coding description:RHC1A
Sequence	ATGTCGACTCCAGCCGCCGCTGCGAAGCAATACTTTTGCTACCAATGCAACCGCACCGTC CTCATCGCGGCCTCCGCCGTCGCCGCCGGGGAGCTCTCGTGCCCCGAGTGCCACGGCAAC TTCCTCGAGGAGGTCACCATCCCTGCCCCAACCTTCATCCAGCTCCCTTTCCCTTTTGCT TCCACCACGATCCCTACCGCCAGTACCGCCCCGCGCCCCGCCCCAGCAGCCGGCACCGGC AGGCCCCCTTCCTTCTCGTCCTCCTCCGCTGCGACCTCTCGGTCCGAGCCCCGCTACATC TCCTCCATCCTCAACTCCTTCGTCGGACCCGGCGAACAACCCAACAGGATCAGCGGCTCC AGCATACGTTTCGCCCCTGGCACGGCCACCCACAGGAACGAGCCCGAGCCCTTCGACCCG GTAATGTTCTTCCAGAATTACATCCAAAGCCTCGTGGAGGGAGGCGCCAACATCCAGGTC CTCTTCGACGATGCCAGCGCGAGCCTCGGCTCCGGACCCGGCCTAGGGCGCCTCGGCGGG GCAAGCTTCGGGGATTACTTCGTCGGCCCAGGCTTGGAACAACTCATCGAGCAGCTCGCC GAGAACGACCCCAACCGCTATGGCACGCCGCCGGCTGCCAAGTCGGCCCTCTCCTCGCTC CCCGACGTCGTCGTGACTCACACCATGGTCGCAGCTGCGGAGGGCGCTGAGTGCGCCGTC TGCAAGGAGGATTTCTCTCCTGGAGAGGTGGCCAAGCAGATGCCCTGTAACCACATCTAC CACACCGACTGCATCATGCCGTGGCTTGAGCTTCACAACTCGTGCCCCATCTGTCGCTTT GAGCTTCCCACTGACGATCCTGATTATGAGGTGCGGAAGGGCTCTAATTCTCAGCAGGCT GTTGGTATTGCTGCTGCTGCATCAGGGAGCTCTACTGCTGCTGAGGGACAAATGGAGAGG CAGGAGAATCCAAGGGTGGTTGAGAGGAGGTTCAATGTGTCGCTGCCATGGCCATTCAGT GGATTGGGAGGGCAAACATCGCAGCAGGACGGGAACAGTGGAGGCAGTGGTAGCAACTCA CAAGGCAGTGGCTCGCAGGATGGTGGCCCACCCAGCAGCAAGAATTGA

Peptide Sequence

PEP ID	Zm00001d032646_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:233067573:233068723:-1 gene:Zm00001d032646 transcript:Zm00001d032646_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RHC1A
Sequence	MSTPAAAAKQYFCYQCNRTVLIAASAVAAGELSCPECHGNFLEEVTIPAPTFIQLPFPFA STTIPTASTAPRPAPAAGTGRPPSFSSSSAATSRSEPRYISSILNSFVGPGEQPNRISGS SIRFAPGTATHRNEPEPFDPVMFFQNYIQSLVEGGANIQVLFDDASASLGSGPGLGRLGG ASFGDYFVGPGLEQLIEQLAENDPNRYGTPPAAKSALSSLPDVVVTHTMVAAAEGAECAV CKEDFSPGEVAKQMPCNHIYHTDCIMPWLELHNSCPICRFELPTDDPDYEVRKGSNSQQA VGIAAAASGSSTAAEGQMERQENPRVVERRFNVSLPWPFSGLGGQTSQQDGNSGGSGSNS QGSGSQDGGPPSSKN

Transcript Sequence

Transcript ID	Zm00001d032646_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:233067573:233068723:-1 gene:Zm00001d032646 gene_biotype:protein_coding transcript_biotype:protein_coding description:RHC1A
Sequence	ATGTCGACTCCAGCCGCCGCTGCGAAGCAATACTTTTGCTACCAATGCAACCGCACCGTC CTCATCGCGGCCTCCGCCGTCGCCGCCGGGGAGCTCTCGTGCCCCGAGTGCCACGGCAAC TTCCTCGAGGAGGTCACCATCCCTGCCCCAACCTTCATCCAGCTCCCTTTCCCTTTTGCT TCCACCACGATCCCTACCGCCAGTACCGCCCCGCGCCCCGCCCCAGCAGCCGGCACCGGC AGGCCCCCTTCCTTCTCGTCCTCCTCCGCTGCGACCTCTCGGTCCGAGCCCCGCTACATC TCCTCCATCCTCAACTCCTTCGTCGGACCCGGCGAACAACCCAACAGGATCAGCGGCTCC AGCATACGTTTCGCCCCTGGCACGGCCACCCACAGGAACGAGCCCGAGCCCTTCGACCCG GTAATGTTCTTCCAGAATTACATCCAAAGCCTCGTGGAGGGAGGCGCCAACATCCAGGTC CTCTTCGACGATGCCAGCGCGAGCCTCGGCTCCGGACCCGGCCTAGGGCGCCTCGGCGGG GCAAGCTTCGGGGATTACTTCGTCGGCCCAGGCTTGGAACAACTCATCGAGCAGCTCGCC GAGAACGACCCCAACCGCTATGGCACGCCGCCGGCTGCCAAGTCGGCCCTCTCCTCGCTC CCCGACGTCGTCGTGACTCACACCATGGTCGCAGCTGCGGAGGGCGCTGAGTGCGCCGTC TGCAAGGAGGATTTCTCTCCTGGAGAGGTGGCCAAGCAGATGCCCTGTAACCACATCTAC CACACCGACTGCATCATGCCGTGGCTTGAGCTTCACAACTCGTGCCCCATCTGTCGCTTT GAGCTTCCCACTGACGATCCTGATTATGAGGTGCGGAAGGGCTCTAATTCTCAGCAGGCT GTTGGTATTGCTGCTGCTGCATCAGGGAGCTCTACTGCTGCTGAGGGACAAATGGAGAGG CAGGAGAATCCAAGGGTGGTTGAGAGGAGGTTCAATGTGTCGCTGCCATGGCCATTCAGT GGATTGGGAGGGCAAACATCGCAGCAGGACGGGAACAGTGGAGGCAGTGGTAGCAACTCA CAAGGCAGTGGCTCGCAGGATGGTGGCCCACCCAGCAGCAAGAATTGATAAAAAATCAGC TGGAGGTATTT