Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032608_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:231931416:231934263:-1 gene:Zm00001d032608 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha-galactosidase1 description: alpha-galactosidase1
Sequence

ATGGCGGGTGGTCGTGGCTCGTCGGCGGCGAGGCTAGCGCTGCTACTGGTGGTGGTGGTG
GCGGCGGTGGCGGGCGGCGCCGTGGCGGGGGGCAAGGTGGTGCACGTGGAGGAGGCGCAC
CGGCGGAGCATGCTGGCCAATGGCCTCGGCTCGGCCCCTCCCATGGGGTGGAACAGCTGG
AACCATTTCCAGTGCGACGGCAACGGCGAGGTGGTCATCAGGGAGACCGCGGACGCGCTC
GTGTCGACCGGACTCGCCGCTCTCGGCTACAGATACGTCAACATCGATGATTGCTGGGCA
GAGCCACAACGTGACGCTAAGGGGGTGGATTACCTCAAGTACGACAACTGCAACAACGGC
GACCTGAAGCCGCTGGAGAGGTACCCGGAGATGAGCAGAGCACTGATGAAGGTGGGGCGG
CCGATCTACTTCTCGCTCTGCGAATGGGGCGACATGCACCCGGCGACGTGGGGCGCGACC
TACGGCAACAGCTGGAGGACCACCAACGACATCGCCGACACCTGGGACAGCATGATCGCC
ACGGCGGACCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGGAACGATCCG
GACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACGTCGTGCACTTCAGC
CTCTGGGCGATCTCCAAGGCGCCTCTCATCATCGGCTGCGACGTCAGGCACATGTCGCGG
GAGACGTACGCCATCCTGGCCAACAAGGAGGTGATCGCCGTCAACCAAGATCCGCTCGGC
GTGCAGGGGAAGAAGGTGCGGATGGAGGGGAGCAGCGAGATCTGGGCCGCGCCGCTCTCC
GAGTACCGGACGGCGGTGCTGCTCCTGAACCGGCACGCCAAGGACGAGGCCACCATCGCC
GCGCACTGGGACGACATCGGCCTCCCCGCCGGCACGCCCGTCGAGGCCAGGGACCTGTGG
CTGCACGAGACGTTGGACGCCACGTTCACGGACAAGATGAGCTTCGACGTCGCGCCGCAC
TCGTGCAGGATGCTCGTCCTCAAGCCCAGGATCCAGATCCAGTGA

Peptide Sequence

PEP ID

Zm00001d032608_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:231931416:231934263:-1 gene:Zm00001d032608 transcript:Zm00001d032608_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha-galactosidase1 description: alpha-galactosidase1
Sequence

MAGGRGSSAARLALLLVVVVAAVAGGAVAGGKVVHVEEAHRRSMLANGLGSAPPMGWNSW
NHFQCDGNGEVVIRETADALVSTGLAALGYRYVNIDDCWAEPQRDAKGVDYLKYDNCNNG
DLKPLERYPEMSRALMKVGRPIYFSLCEWGDMHPATWGATYGNSWRTTNDIADTWDSMIA
TADQNEVWSEYARPGGWNDPDMLEVGNGGMTNSEYVVHFSLWAISKAPLIIGCDVRHMSR
ETYAILANKEVIAVNQDPLGVQGKKVRMEGSSEIWAAPLSEYRTAVLLLNRHAKDEATIA
AHWDDIGLPAGTPVEARDLWLHETLDATFTDKMSFDVAPHSCRMLVLKPRIQIQ

Transcript Sequence

Transcript ID

Zm00001d032608_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:231931416:231934263:-1 gene:Zm00001d032608 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha-galactosidase1 description: alpha-galactosidase1
Sequence

AAGAGAGAGACAAAGTAGAAGCTAAGGCGCGAGTGATAGGAGGGTTTTGGTTCAGAGAGG
AGCGGGGCAATGGCGGGTGGTCGTGGCTCGTCGGCGGCGAGGCTAGCGCTGCTACTGGTG
GTGGTGGTGGCGGCGGTGGCGGGCGGCGCCGTGGCGGGGGGCAAGGTGGTGCACGTGGAG
GAGGCGCACCGGCGGAGCATGCTGGCCAATGGCCTCGGCTCGGCCCCTCCCATGGGGTGG
AACAGCTGGAACCATTTCCAGTGCGACGGCAACGGCGAGGTGGTCATCAGGGAGACCGCG
GACGCGCTCGTGTCGACCGGACTCGCCGCTCTCGGCTACAGATACGTCAACATCGATGAT
TGCTGGGCAGAGCCACAACGTGACGCTAAGGGGGTGGATTACCTCAAGTACGACAACTGC
AACAACGGCGACCTGAAGCCGCTGGAGAGGTACCCGGAGATGAGCAGAGCACTGATGAAG
GTGGGGCGGCCGATCTACTTCTCGCTCTGCGAATGGGGCGACATGCACCCGGCGACGTGG
GGCGCGACCTACGGCAACAGCTGGAGGACCACCAACGACATCGCCGACACCTGGGACAGC
ATGATCGCCACGGCGGACCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGG
AACGATCCGGACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACGTCGTG
CACTTCAGCCTCTGGGCGATCTCCAAGGCGCCTCTCATCATCGGCTGCGACGTCAGGCAC
ATGTCGCGGGAGACGTACGCCATCCTGGCCAACAAGGAGGTGATCGCCGTCAACCAAGAT
CCGCTCGGCGTGCAGGGGAAGAAGGTGCGGATGGAGGGGAGCAGCGAGATCTGGGCCGCG
CCGCTCTCCGAGTACCGGACGGCGGTGCTGCTCCTGAACCGGCACGCCAAGGACGAGGCC
ACCATCGCCGCGCACTGGGACGACATCGGCCTCCCCGCCGGCACGCCCGTCGAGGCCAGG
GACCTGTGGCTGCACGAGACGTTGGACGCCACGTTCACGGACAAGATGAGCTTCGACGTC
GCGCCGCACTCGTGCAGGATGCTCGTCCTCAAGCCCAGGATCCAGATCCAGTGAACTACA
CCACCGCTGCCGCATGGGCGCGCGTACGTGCGGCCCTCACGACGTCACCACGCGTCGATT
CATTTGTACTGCAGGCTACTAATTGCAGACACGTGGAATCAAAATCACCAAGAATGGTTC
TTGTTCCT