Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032606_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:231874087:231884831:-1 gene:Zm00001d032606 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTAAAGCTCAACAAGAGAACCATTGTGCTTGAAGATAAGGATCAAATTCAAGGTTTT
CCTAAATATACATTCTCACTAACACCCTTAGATAAGTTGGACCAATACAAAAACAAGACC
GATCGTTTTATAGATGTCATTGCTAAGATCAGTGGAGTATCAAATGTAGCAAAGGTTCCT
ACAACCTCAGGAGATCAGCAAATGAGGAGAGTTGTATTATTAGAAGACCTTAAGGGAAAC
ATGATTGAGCTATCACTATCAGGAAAAAGAGCTTTGGAATTTGACGGAGATCAAGTTTTA
GATGTGGGTCAGCAACATCATGTTATTGCAATATTTGTAGGAACCTTAGTCAAACTTTAC
AAAGGTGAATATACATTCTTGAGTGGAACATCAGCATGCCGGTGGTACATCAACGAAAAT
GACATTGCTGAAATCAAGGCTTTCCAGAAAAGTTTGCCAAGTGAACCTGTACCTATCAAA
AAGACCTATCTCCAAAATGATGATGCAACTCACAAATTTGAGGAGAAAAGTCTGGAACAG
CTCAAGCATGTAGACCCTTTCCTTGACATGGGACAAAGATATCAGTGCACAGCTACTATA
ATTGGTATCACAGAAAACCAAACATGGTGTTACAAAGCATGCAAGATCTGTAACTCAGCA
ATCATTCAAAAGGAAAATGGTTATAAATGCACAAAGGAAGGATGTCCATCTACACAATTT
GAATGGAAGTACAAGATACCATTCATTGCAAGTGACCACACCTATAATCTAGAGTTTATG
TTCTTTGAAAAAAAGGGAATGGAGCTTATAGGAAAGAGTGCATCGACTCTTCGAAAACAA
TATGAACCAAAGGAGATACCACCGGATATAACATCTTGGATAGGTTATAAATTCACTTTT
GTTGTTAGAGTCCTATCAAAGAAAAGTGTCAAGACTATTGATCCATCCTTTGAAGTGCTT
ATGATAAAAGAAAAATACCAGAAGGAACCTATTATATCATTTATCAGCTCAAGTGGAGTT
GTACCAGCAGAATCATCTTCCTCTACAATGGCAGAATACAAGGAATTACCATTGCTAGTG
CCAATTACCTCCAAAGACATAGAAAAAAAGGAGCGATCCACTTCACAACCAGAACACACC
GAAGAAACTCAAGATATGGACATTGAACCATCTGGGTATGATTAA

Peptide Sequence

PEP ID

Zm00001d032606_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:231874087:231884831:-1 gene:Zm00001d032606 transcript:Zm00001d032606_T003 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVKLNKRTIVLEDKDQIQGFPKYTFSLTPLDKLDQYKNKTDRFIDVIAKISGVSNVAKVP
TTSGDQQMRRVVLLEDLKGNMIELSLSGKRALEFDGDQVLDVGQQHHVIAIFVGTLVKLY
KGEYTFLSGTSACRWYINENDIAEIKAFQKSLPSEPVPIKKTYLQNDDATHKFEEKSLEQ
LKHVDPFLDMGQRYQCTATIIGITENQTWCYKACKICNSAIIQKENGYKCTKEGCPSTQF
EWKYKIPFIASDHTYNLEFMFFEKKGMELIGKSASTLRKQYEPKEIPPDITSWIGYKFTF
VVRVLSKKSVKTIDPSFEVLMIKEKYQKEPIISFISSSGVVPAESSSSTMAEYKELPLLV
PITSKDIEKKERSTSQPEHTEETQDMDIEPSGYD

Transcript Sequence

Transcript ID

Zm00001d032606_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:231874087:231884831:-1 gene:Zm00001d032606 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAACATCTTTACCTTATAAAAATATAAAGGAGCCGCTTCTCTACAGCCGGATGTATTT
GCTTCTCCCGTACACAACCTGCTCCATTCTTGGCGAGCGTTCAGGCGAAAGAGGAAAAAG
AGAGGAGTGCACCGCGAGTGTACAGCTCGAAGATCCACTTCCAAGTGCTTCCTTTTAGGA
TAATCTTATATACCTTCAAGCAAATAGACAATCGGAGGAACTTCACAAAGATGGAAATTA
CTCCAATATCACAACTACGTCCAGGAAAGTTAAATTATGCTTTACATGTGCGAATATCTA
GAATGTGGGAGTTTAGAGGCACAAATGAACAGAACGACATCAAACACCTTGACCTTGTTC
TCATCGATCAAAAGGGAAATTCAATATATGCAGAGATTCCACCAGATGCAATTGCTGTCT
TAAAAAGCCACATCTACACGAAAAAAAGATTGTATACATATCCAAAATAACAATTGAACG
AGCTAAACTGGGATTCAGAGTTGTTGACAATCCTTATATGGTAAAGCTCAACAAGAGAAC
CATTGTGCTTGAAGATAAGGATCAAATTCAAGGTTTTCCTAAATATACATTCTCACTAAC
ACCCTTAGATAAGTTGGACCAATACAAAAACAAGACCGATCGTTTTATAGATGTCATTGC
TAAGATCAGTGGAGTATCAAATGTAGCAAAGGTTCCTACAACCTCAGGAGATCAGCAAAT
GAGGAGAGTTGTATTATTAGAAGACCTTAAGGGAAACATGATTGAGCTATCACTATCAGG
AAAAAGAGCTTTGGAATTTGACGGAGATCAAGTTTTAGATGTGGGTCAGCAACATCATGT
TATTGCAATATTTGTAGGAACCTTAGTCAAACTTTACAAAGGTGAATATACATTCTTGAG
TGGAACATCAGCATGCCGGTGGTACATCAACGAAAATGACATTGCTGAAATCAAGGCTTT
CCAGAAAAGTTTGCCAAGTGAACCTGTACCTATCAAAAAGACCTATCTCCAAAATGATGA
TGCAACTCACAAATTTGAGGAGAAAAGTCTGGAACAGCTCAAGCATGTAGACCCTTTCCT
TGACATGGGACAAAGATATCAGTGCACAGCTACTATAATTGGTATCACAGAAAACCAAAC
ATGGTGTTACAAAGCATGCAAGATCTGTAACTCAGCAATCATTCAAAAGGAAAATGGTTA
TAAATGCACAAAGGAAGGATGTCCATCTACACAATTTGAATGGAAGTACAAGATACCATT
CATTGCAAGTGACCACACCTATAATCTAGAGTTTATGTTCTTTGAAAAAAAGGGAATGGA
GCTTATAGGAAAGAGTGCATCGACTCTTCGAAAACAATATGAACCAAAGGAGATACCACC
GGATATAACATCTTGGATAGGTTATAAATTCACTTTTGTTGTTAGAGTCCTATCAAAGAA
AAGTGTCAAGACTATTGATCCATCCTTTGAAGTGCTTATGATAAAAGAAAAATACCAGAA
GGAACCTATTATATCATTTATCAGCTCAAGTGGAGTTGTACCAGCAGAATCATCTTCCTC
TACAATGGCAGAATACAAGGAATTACCATTGCTAGTGCCAATTACCTCCAAAGACATAGA
AAAAAAGGAGCGATCCACTTCACAACCAGAACACACCGAAGAAACTCAAGATATGGACAT
TGAACCATCTGGGTATGATTAAGATAAGCTTCGTTCTTACCTTCTATATTAAATCTTAAT
ATCTTTCCTATAATACCATTTCATATTTATTTTCCATGATGAACTATATATATGTGTCTA
CATACAAGAAAAGATTATACTTATTTGTTTGATCTGCAATTAAAAAAAATATCTAGTCCA
TTCAAATACTGCATATTAGTTCAACGTTTTTTATAAACAACTTCAATACCTTATGTCATA
AATTCCCAATGAAACCATAGTTTAGAGACCATGAGCTATGTAGCACAATTTCCAGAAAAT
CTAAACACTTAAATCTTCATTTAAAGTGACATGGCAGTTCATTATGTATTGTTTGCCATT
CTATCTATTTACTTTTCCATGTGGGCACAAAGTCAAGAACAACAATGTGGTTTTGTGCAG
TTTTGTGCACACATCCTAGACTCCATATTATCTGCATTTCAACATTTCGAAAGAATCTAG
GCATTAATGGTCTATGTCATGTTGTTATAATAATTTTAAAATCTTACGTCTTGTCATTCT
AAATAATCCTTCACACTATATTATCTTCATTTCAGCATTTGGGAAGAATCTCAGATTTCA
AACAAAAGAAGCTTTGGAGACCCAAACTATGACAAACAAGTATTCTCCTTAGCCTTATCA
AAGTGGACATATATCATGTTTAGATAAAGTCTTATTAATACCATCACATAGATTTTTATT
GCCAGAACAATCATTTTAGAAATTTGCAAATGAGGTTTCTTGCATTGTAAATAATATATA
TGGTTTTGAGCTGAACTCTTAATAATATCATAGATCTTTAGCCATATTTTATTTCGTAAT
CATTAGTGGTGATTTTTTGTGGGTTAAGATTGCTGAAACATAGAATGATGAGAAGTTGTA
TATAATGTGTAAGCTTCAATATTACTAAAACAAAAGAATGATAACTACATTTTTTGACAT
GGTAGAAAAATCAATTACAGGCTTCCTAGCGACACCGGGCCAATGTAGCAGCAACAGAAA
AACCATTGTTATATTAATTGGCTTCCAAAAGAGCACATTATTTAGTGTTTTTGCTTACTT
AAGTTATTAGGCTAATGTTTTTAGGGATATCAGAAAGCATGTATCAAGTGTTAGTGTAAA
TTGGAGAAAGTAAAATATGTAAATTTTATTGCTTTATCTCACTCCAAGGGAGTTGACTAG
ATTTAAAACTAAACAAAGTGCGAAGCAACAAAACCAATGTGTGCAAAAGCTAACTTGGCT
TGTATGCGTTCATTATCTCATTATGTTATTATGAATAACAAAACTCTTTTTTAACAGGAA
ACAACTGATGACAAAGATGACCTTCCACAATTCAAGAAAATCAGGAGTACCCACTCTCAA
GGAAAAAGCAAAAAATGATGCATGATAGACTAAGAAGACAAAGTAAAGTAGTAGACTTTA
AAAGATCTTGACTAAAGTAATATATCTATATTTTCTGTTTCGATAAACAACGATAGCGCT
AGTGCTACATCTTTTAATGTATATAACCATGTAGTATCAATAGCGCTACATCTTAAGCGT
GTAGCACCAGCAGCGCTACATATTTTGATGTATATAAGCATGTAGCATCAATAGCGCTAC
ATCTTTTGTTAAATATAAGCACATCTTTTGATATATATAAGCATGTAGCATCAATAGTG