Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032603_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:231780847:231784912:1 gene:Zm00001d032603 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCGGCCAGTGGCTGGGGGAGGGGATGCCGTCGTCCAACCTGCAGTGCTTCTTGGAC
TGCACCACCCCCACCGTCGAGACGCACATTCTCCCCAAGACGAATGGACGATTGCCGACC
GACGCCTGGCACCACGCTGAGATGGACAGCGTCGAGTACTTCAATCTTGCCGACCTCTGG
GAACAGTACTATGAATGGAGCGCGTACGGCGCCGGAGCTACGGTGCAGCTCCCAGGAGGG
GACAGAGTAGTTCAGTACTATGTTCCATACCTGTCAGGGATGCAGCTATACACCAACAAG
GTCCTGACTGCATCCAGAAGTTTTGGTGAAGATAATGGCATGGATTTATGGAGTGATGAT
GAGGACAACGAGAAGATGTCGAGATCCTGGAGTTCCACCTCTGATGAATCATTGTTCAAC
TGTGATGTGTTATGGTCCAACAGGAAGCGTCCAGGGCACCTGTACTTTGAGTTCTTTGAA
GTAGGTTCACCTTATGGAAGGGTTCCTCTCATTGACAAGGTTTATGAACTATCCCAGGGC
TTTCCTGGATTGACATCACTGAAGAGTGCTGAGCTTTCGCCTGTTAGCTGGATGTCAGTT
GCCTGGTACCCTATATACCACATTCCTTACCAGCGCAGCGTGAAGGACTTATCTGCATGC
TTCCTAACTTACCATACCATTTCCTCCTCGTTTCAAGGTATGTTTTCCTCGTTTTGTTTG
AAGGCATGTTTGTTCATCAGAGTGTCAGTCACTAAACTCTACCATTTTCTTAAATTCTTA
CGGCACAATAATTTGATTATTCTAATATGCTTCTGTACCAGTGCCAAACAGACGTTGTAT
AACCGTTGA

Peptide Sequence

PEP ID

Zm00001d032603_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:231780847:231784912:1 gene:Zm00001d032603 transcript:Zm00001d032603_T002 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGGQWLGEGMPSSNLQCFLDCTTPTVETHILPKTNGRLPTDAWHHAEMDSVEYFNLADLW
EQYYEWSAYGAGATVQLPGGDRVVQYYVPYLSGMQLYTNKVLTASRSFGEDNGMDLWSDD
EDNEKMSRSWSSTSDESLFNCDVLWSNRKRPGHLYFEFFEVGSPYGRVPLIDKVYELSQG
FPGLTSLKSAELSPVSWMSVAWYPIYHIPYQRSVKDLSACFLTYHTISSSFQGMFSSFCL
KACLFIRVSVTKLYHFLKFLRHNNLIILICFCTSAKQTLYNR

Transcript Sequence

Transcript ID

Zm00001d032603_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:231780847:231784912:1 gene:Zm00001d032603 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAACCGAAGCCGGTTTCATATCGCACCCCGCACCCCGCTCCTCCCTCCTCCTGCTCCGGC
TCCCTTCCTCCACAGCTCGAATAAAGTCCCCTCCTCTTCCAGTCTTCCTCCTCCGCGCTC
CAATCTTCCCAGCGGCACGGTTTCGGTTCTTGCAGGGTAGCACGGAGGTTCCTTCGTTGG
GGGTTCTTGGTCTGCCTTGAGCGATTTGGTGCGCCGCGGATTGTTGTGGGGTTGTGAGTT
GTGACTGCAGAGACAAGGGCCGTGTGGAGAGTCGAGCCATCGAGGTCGAGGAGGAGGGAA
AGGAAAAGGGGGGCGCATGGGCGGCCAGTGGCTGGGGGAGGGGATGCCGTCGTCCAACCT
GCAGTGCTTCTTGGACTGCACCACCCCCACCGTCGAGACGCACATTCTCCCCAAGACGAA
TGGACGATTGCCGACCGACGCCTGGCACCACGCTGAGATGGACAGCGTCGAGTACTTCAA
TCTTGCCGACCTCTGGGAACAGTACTATGAATGGAGCGCGTACGGCGCCGGAGCTACGGT
GCAGCTCCCAGGAGGGGACAGAGTAGTTCAGTACTATGTTCCATACCTGTCAGGGATGCA
GCTATACACCAACAAGGTCCTGACTGCATCCAGAAGTTTTGGTGAAGATAATGGCATGGA
TTTATGGAGTGATGATGAGGACAACGAGAAGATGTCGAGATCCTGGAGTTCCACCTCTGA
TGAATCATTGTTCAACTGTGATGTGTTATGGTCCAACAGGAAGCGTCCAGGGCACCTGTA
CTTTGAGTTCTTTGAAGTAGGTTCACCTTATGGAAGGGTTCCTCTCATTGACAAGGTTTA
TGAACTATCCCAGGGCTTTCCTGGATTGACATCACTGAAGAGTGCTGAGCTTTCGCCTGT
TAGCTGGATGTCAGTTGCCTGGTACCCTATATACCACATTCCTTACCAGCGCAGCGTGAA
GGACTTATCTGCATGCTTCCTAACTTACCATACCATTTCCTCCTCGTTTCAAGGTATGTT
TTCCTCGTTTTGTTTGAAGGCATGTTTGTTCATCAGAGTGTCAGTCACTAAACTCTACCA
TTTTCTTAAATTCTTACGGCACAATAATTTGATTATTCTAATATGCTTCTGTACCAGTGC
CAAACAGACGTTGTATAACCGTTGAAATTGTTATCAACAATCTTCATACTTTTTAGGGTC
TTGAGTTGATTTCCCTTTTCCGATGTTTAGGATATATGTGTTGGCATATTGGTTGAAATT
TCAAACTCAGGTTGTGCATCAAAGCATGACTACAGGATATAGTGACAGCTCCTTTTGTTT
AGTGCAGTATTCTAATAAACATCTAGTCTTCTAATACTTCTGTTGTGTTGTGACTTAGAA
CTTATTTGCATATAAAACATTAGGGCTTAATGAGTGAAAAAGTTACCGTTTGCTCAAGCT
CAAATCCCATGATATGTATTGCAACATTATTATCGTTCACAGGAAAGAGTATTTCTCATG
TCTGTGTACCTGAGAAAAGATTTCCCCGAACCATTGATATATTGCTTAATGTACACTAAA
AAAGAGGAATGTCAATCTGGTGGCCTAGACCTAGGGGTGGTAATAGATCGTGATCCAAAT
GTTTCTTCACGATTTGTTATGGCCCTAAATAAATTTTGGTTCAAAAATGAATAGAATTAG
AGTCCGATCCTTAAATTTTATAGTGTAAAATTTAGAGCCCATTGTCACCTCTACCAGGAC
CAGAAGAAAGGAATTTAAACTGTTGCTTTCTCATTCTTCTTGTAATTGGTTGGTTGAGTG
GTCTTTAGTTTTCAAACAATGAACTTTATATTTGGAAAAGGTGTAACTGATGTTCAGTTA
CGTTTCTATATCTAGAAAGTTTCCTACTATATAACTTAATGATGTGCTCTATACTGCATA
CCAGTTGGTATGGCACACTATTCTTAAATCAATCGATGGCTTAGCTTACAAGAGTATAAG
AGTTTCCTTCAAAGCTTTGTTCGTCTTGCTATGTTGCGTCCAGTTTGTCAACTTTGGTTT
CAAAAGGCTTCATGTCTTAGCTTTAAAGTCTGTAGTTAAGGAAACCACTCAAACAAAAAG
TTAGTGGCAGCAGTTCTTTGCTCAGTAAAGAGAAGGAAAGAGACCGTGTTGTCATGTTCC
ACGACTTCATTACTTATCCATAGACATGCAGTTGTTTCTTGAAGCTAAAAATACCTATGT
TATATAACATGGAGGAAGAGTTGTTCAATAGACCATCTTTGGAGAAAGCTTGTTTGGATT
GCGATATGTGCAAAAGCACCTAGGTTCACCAGCTGTCCTTCCCAAGAAAACAAATGATGA
TATATAGAGTCCAAATCAAGCCAAGATCTTTAAGCTTGAATATGCTTTGCATGTGAATAC
ATTGACTTTCGGTCAGTTATTTGTTAATGTATGTCCTTAATCACGGCTGCACCAGCGATG
ACCTTAGTACTGTTTTCAAACCCTCAGTAACCTGTGTTATGTTTCTCACAGATCACGGGC
TTGAGACCATGACCACTGATTGTTGCCATCCAGTTGCAAACGGCAAACAAAATGGCCACA
TGGATAAGAAGAGCAACACCGTATCACTGCCTCCATTTGGCCTCGCAGCACACAAGATAC
AAGGTTCCCTCTGGACCAACCCCATGACAGGAGACCGCAGAAAGATGGACTTCCTCTTCA
GTGCGGCAGACTCCTGGCTGAAGCAGCTTGGAGTCCAGCATCATGACTTCAACTTCTTCA
TCACTCACCCCATGTGAACTGCTGATCCGGAGTGGCTTGCAAAGAACCACATGGGTACAG
TTTGAAGCTAGTGATATTACCTACCCACCACCAACGGGGTAGCAAAACGTTTACAGTACA
ATGCGCTGGTGAAATGAGTCTAACAATCGCAGGATAGATTTATACTTGAGTTTACTGCTG
CAGCGAATACCAAACATGTCGGCACTCAAAAAGGTTTTCTGTTTCTTGTTTCTTGGCAGA
AAAATGTAACTGATCTGTACAGAAGTTTTGCAACTAATTTGGTATCCAATGTGGGGGTTG
AG