Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032567_T019
CDS Infomation	cds chromosome:B73_RefGen_v4:1:230714517:230732552:-1 gene:Zm00001d032567 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 16
Sequence	ATGACCTCTTCCGCTTCCCCGAACCCTAGCCCCGTCCCAGTCCCCACTCCGATCACCACC GCGAACGGGACCACCTCATCACCGAAGGATCAGCCGCCGCCTCCGCCTCCGCTGCCGCAG CAGCAGCAGCAGCAGGGGGGCGGCCAGGAGGAGGCAGAGGCGGCGGATGGGGGAGGCGCC GAGGCTGCGGAGGCGGGAGTATTAGCTGGTGTTGCGGCCGAGGCTATGGAAGTGGATGGG GGCTCTGGCGCGGGGGATGCGGAGGCGGGCGGCTCGGTGGGGGGAGGAGTAGGCGCTGGG GCGGGTGGAGGAGCGCAGCAGGCCTCGCCGGCGACCGTGTTCCGGATTCGGCTCAAGCAG TCGCCTGCGAGCCTCCGTCACAAGATGCGCGTGCCCGAGCTGTGCAGAAACTTCAGTGCA GTTGCTTGGTGTGGAAAACTGAATGCAATTGCTTGCGCTTCAGAGACTTGTGCACGTATT CCAAGCTCAAATTCAAGCCCTCCATTTTGGATTCCTATACATATCCTGAATCCAGAGAGA CCAACAGAATGCTCTGTATTCAATGTGAAAGCAGATTCTCCACGTGACTTTGTTCAGTTC ATTGAATGGTCTCCTCGGTCCTGCCCTCGTGCATTGCTAGTGGCAAATTTTCATGGGCGG ATCACTATATGGACACAACCAACAAAGGGTCCTGTAAATCTTGTACGTGATGCAAGCTTG TGGCAGTGTGAACATGAATGGCGTCAAGATCTTTCTGTGGTGACCAAGTGGTTGTCTGGA ATTTCTCCGTATAGATGGCTTCCTACAAACTCCACTAGTTCAAACCTGAAGACCTTCGAG GAAAAATTCCTCACCCAACAGCCTCAGAGTGCAGTGGGATGGCCAAGTATTCTATGCGTC TGTTCAGTTTTTTCATCAGGTTCTGTTCAACTTCATTGGTCACAATGGCCTTCTCAAAAC TCAGCACATTCTAGATGGTTTTCTACTAGCAAAGGGCTTCTAGGAGCAGGACCCAGTGGC ATAATGGCTGCTGATGCTATTGTAACAGAATCTGGAGCTTTACATGTTGCTGGGGTACCC CTTGTTAATCCATCCACTGTAGTTGTTTGGGAAGTGATGCCAGGTCTTGGAAATGGTATT CAGGCAACTGCAAAGATAAATGCAGCAAGTTCTGTTCCTCCATCTCTGAATCCCCCTTCA TGGCCGGGTTTTGCTCCACTAGCAGCCTACCTATTTTCTTTGCAAGATTATCTTGTTTCT GAGGGTGCACAGACAAAAAAGCTGACAGACAATAATGAGACTACTGAGGCTGCATCAATT CATTGTTGTCCAGTTTCTAATTTTTCAGCTTATGTCAGTCCAGAAGCAGCTGCACAGTCA GCTACTACTACCACCTGGGGGTCTGGGGTCACCTCAGTTGCTTTTGATCCGACTCGTGGA GGATCGGTCATTACAGTTGTAATAGTTGAAGGGCAGTACATGTCTCCTTATGACCCTGAT GAAGGACCTTCTATCACCGGATGGAGGGTGCAATGCTGGGAATCTTCGTGCCAACCTGTT GTTCTTCATCCAATATTTGGAAGCCCTACTAGCTTAGGTGGGCAGCCTCCCATGCAAACT GTTTGGTCCACTAGAGTTAATAAAAGCATTCCACCAACGGAGGATCTTAAAAATCCTCAA ACATATGTTCCGATGCCAACGACATCAGATGAACGGAGCTCCTCTGAGTGCAGTGTTGAC AGGGCGAACAGACTCAGCTTTGACCCTTACGATCTTCCAAATGATGTTCGACAACTAGCT CAAATAGTTTATTCTGCTCATGGTGGTGAAGTTGCTGTTGCTTTCCTCCGTGGAGGAGTG CACATTTTCTCAGGTCCAAATTTTGATCAGGTTGACAGCTACCATGTCAATGTTGGCTCT GCTATTGCTCCACCAGCCTTTTCATCAAGCAGTTGCTGCTTAGCATCAGTTTGGCATGAC ACGCTCAAAGATCGAACCATATTGAAGATAATACGTGTGCTTCCTCCTGCAATTCTTAGC ACACAAACAAAGATCAGCTCAGCAGCATGGGAACGTGCAATAGCAGATAGATTTTGGTGG AGTTTATTGGCTGGAGTTGATTGGTGGGATGCTGTTGGTTGTACACAGAGTGCTGCCGAA GATGGTATAGTTTCACTTAACAGTGTGATAGCTTTTCTGGATGCGGACTTCCATTCTCTT CCGACTATGCAACAGAGGCAGCAGCACTGTCCTAACCTTGATAGGATTAAGTGTAGGTTG TTGGAAGGAACAAATGCCCAAGATGTACGGGCACTTGTGTTGGACATGCAAGCAAGATTA CTTCTGGATATGCTAGGCAAAGGAATCGAGTCTGCCCTTACAAATCCATCAACTCTGCTA CCTGAGCCCTGGCAAGCTTCCAGTGATATGTTATCCAGCATCGATGCTGACAAAATGACT GTTGAGCCAGCTCTGCTTCCAAACATCCAGGGTTACGTTGATGCTGTTCTTGATTTAGCA TCACATTTCATAACTCGCTTGCGGCGTTATGCGAGTTTCTGTCGAACTCTGGCGAGCCAT GTGGGGCCATCTTCTACCACAGGCACTTCTAGAAATATGGTTACAAGTCCAACAAACAGT TCTCCTTCGCCATCAAATAATCAAGGTAATCAAGGGGGATCAACATCTGCAACAGGGAAC TCACAAATGCAGGAGTGGGTCCAAGGTGCAATTGCTAAGATTAGTAACAATTCTGATGGT GCTGCCACTGCAACACAGAATCCAATGAGCACGAGGACATCATTTATGCCCATCAGCATT AATACGGGCACTTTCCCTGGCACACCTGCTGTGAGACTTATTGGGGATTGCCATTTTCTT CATAGATTATGTCAATTACTGCTATTTTGTCTGCTTTTCCGAAGAAGGCAATCACCAAGG TTACTTGCCAGTTCGCAAAAAAATCAAGATTCTGCCATGCAGAAAATACAACACATGATG AATGCTAAGACAGAAGATAACAGTTCGACAGTAAGATCTGGTCTAGGGGCTGCCAAAGTA GAAGAAGGTCACTCTGCGCGTGGTGGACAATTTGTTCTTGGTGGTGCAAAGGGTCCTGAA GAAAATCCAATTGGCAAATCTGTTAGAATAGGTTCTGGCAACGCTGGGCAAGGTTATACT TCAGATGAGGTCAAGGTCCTTTTTCTTATACTGGTTGACCTATGTCGAAGGACATCTACC TTGCCGCATCCATTGCCTGCCTCTCAGGTTGGTTCCAGTAGCATTATCATAAGGCTGCAC TACATTGACGGCAACTACACAGTGCTCCCTGAGGTAGTGGAAGCGTCTCTTGGTCCCCAT ATGCAGAATATGCCTCGTCCACGAGGAGCTGATGCTGCTGGACTTCTACTTCGAGAATTA GAACTGCAACCTCCTGCGGAAGAATGGCATAGACGCAACATGTTTGGTGGACCCTGGTCA GAACCAGATGATTTTGGTCCATTGGACAATATGCCTCGTCTAAAAATTAGTGGTTCCATC AACTCTCATTTGTCTGACATGGAAGTGGATGCTGTCAGTTCCATTGGGATTGATCTTTGG CCAAGAAAGCGTAGGTTATCTGAAAGAGATGCTGCATTTGGTCTGAAAACATCTGTAGGT CTTGGAGGTTATCTAGGTGTCATGGGATCTCGAAGAGATGTTGTCACGGCTGTGTGGAGA ACAGGTCTCGATGGTGATTGGTACAAGTGCATACGTTGTTTGCGGCAAACTTGTGCATTT GCGCATCCTGGTGCCCCAAATCAGACAAATGAACGTGAGGCTTGGTGGATCAGTCGGTGG AGCCATGCTTGCCCAATGTGTGGGGGTTCATGGGTGAAAGTTGTTTGA

Peptide Sequence

PEP ID	Zm00001d032567_P019
PEP Infomation	pep chromosome:B73_RefGen_v4:1:230714517:230732552:-1 gene:Zm00001d032567 transcript:Zm00001d032567_T019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 16
Sequence	MTSSASPNPSPVPVPTPITTANGTTSSPKDQPPPPPPLPQQQQQQGGGQEEAEAADGGGA EAAEAGVLAGVAAEAMEVDGGSGAGDAEAGGSVGGGVGAGAGGGAQQASPATVFRIRLKQ SPASLRHKMRVPELCRNFSAVAWCGKLNAIACASETCARIPSSNSSPPFWIPIHILNPER PTECSVFNVKADSPRDFVQFIEWSPRSCPRALLVANFHGRITIWTQPTKGPVNLVRDASL WQCEHEWRQDLSVVTKWLSGISPYRWLPTNSTSSNLKTFEEKFLTQQPQSAVGWPSILCV CSVFSSGSVQLHWSQWPSQNSAHSRWFSTSKGLLGAGPSGIMAADAIVTESGALHVAGVP LVNPSTVVVWEVMPGLGNGIQATAKINAASSVPPSLNPPSWPGFAPLAAYLFSLQDYLVS EGAQTKKLTDNNETTEAASIHCCPVSNFSAYVSPEAAAQSATTTTWGSGVTSVAFDPTRG GSVITVVIVEGQYMSPYDPDEGPSITGWRVQCWESSCQPVVLHPIFGSPTSLGGQPPMQT VWSTRVNKSIPPTEDLKNPQTYVPMPTTSDERSSSECSVDRANRLSFDPYDLPNDVRQLA QIVYSAHGGEVAVAFLRGGVHIFSGPNFDQVDSYHVNVGSAIAPPAFSSSSCCLASVWHD TLKDRTILKIIRVLPPAILSTQTKISSAAWERAIADRFWWSLLAGVDWWDAVGCTQSAAE DGIVSLNSVIAFLDADFHSLPTMQQRQQHCPNLDRIKCRLLEGTNAQDVRALVLDMQARL LLDMLGKGIESALTNPSTLLPEPWQASSDMLSSIDADKMTVEPALLPNIQGYVDAVLDLA SHFITRLRRYASFCRTLASHVGPSSTTGTSRNMVTSPTNSSPSPSNNQGNQGGSTSATGN SQMQEWVQGAIAKISNNSDGAATATQNPMSTRTSFMPISINTGTFPGTPAVRLIGDCHFL HRLCQLLLFCLLFRRRQSPRLLASSQKNQDSAMQKIQHMMNAKTEDNSSTVRSGLGAAKV EEGHSARGGQFVLGGAKGPEENPIGKSVRIGSGNAGQGYTSDEVKVLFLILVDLCRRTST LPHPLPASQVGSSSIIIRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLREL ELQPPAEEWHRRNMFGGPWSEPDDFGPLDNMPRLKISGSINSHLSDMEVDAVSSIGIDLW PRKRRLSERDAAFGLKTSVGLGGYLGVMGSRRDVVTAVWRTGLDGDWYKCIRCLRQTCAF AHPGAPNQTNEREAWWISRWSHACPMCGGSWVKVV

Transcript Sequence

Transcript ID	Zm00001d032567_T019
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:230714517:230732552:-1 gene:Zm00001d032567 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 16
Sequence	GCCTGCGCGTCCCCTCCCTTTCCCTTTCCACGGCCGCATCCACCACCTCCGTTTCCACCC CACTTGATAGCGACGCCGCCGCACAGGAACTCAGGAACCCCTCTCGCATCTCCCCTCGCT TCCCCGCGACAGCGACGGCCGGTCGCTTCAAGTGACCCAAGCACCTGCGCCCCTCCTTTC TCCTTTTCTCCCCTCGGCCCCCGTCCCTCTCAGCCCCTATGACCTCTTCCGCTTCCCCGA ACCCTAGCCCCGTCCCAGTCCCCACTCCGATCACCACCGCGAACGGGACCACCTCATCAC CGAAGGATCAGCCGCCGCCTCCGCCTCCGCTGCCGCAGCAGCAGCAGCAGCAGGGGGGCG GCCAGGAGGAGGCAGAGGCGGCGGATGGGGGAGGCGCCGAGGCTGCGGAGGCGGGAGTAT TAGCTGGTGTTGCGGCCGAGGCTATGGAAGTGGATGGGGGCTCTGGCGCGGGGGATGCGG AGGCGGGCGGCTCGGTGGGGGGAGGAGTAGGCGCTGGGGCGGGTGGAGGAGCGCAGCAGG CCTCGCCGGCGACCGTGTTCCGGATTCGGCTCAAGCAGTCGCCTGCGAGCCTCCGTCACA AGATGCGCGTGCCCGAGCTGTGCAGAAACTTCAGTGCAGTTGCTTGGTGTGGAAAACTGA ATGCAATTGCTTGCGCTTCAGAGACTTGTGCACGTATTCCAAGCTCAAATTCAAGCCCTC CATTTTGGATTCCTATACATATCCTGAATCCAGAGAGACCAACAGAATGCTCTGTATTCA ATGTGAAAGCAGATTCTCCACGTGACTTTGTTCAGTTCATTGAATGGTCTCCTCGGTCCT GCCCTCGTGCATTGCTAGTGGCAAATTTTCATGGGCGGATCACTATATGGACACAACCAA CAAAGGGTCCTGTAAATCTTGTACGTGATGCAAGCTTGTGGCAGTGTGAACATGAATGGC GTCAAGATCTTTCTGTGGTGACCAAGTGGTTGTCTGGAATTTCTCCGTATAGATGGCTTC CTACAAACTCCACTAGTTCAAACCTGAAGACCTTCGAGGAAAAATTCCTCACCCAACAGC CTCAGAGTGCAGTGGGATGGCCAAGTATTCTATGCGTCTGTTCAGTTTTTTCATCAGGTT CTGTTCAACTTCATTGGTCACAATGGCCTTCTCAAAACTCAGCACATTCTAGATGGTTTT CTACTAGCAAAGGGCTTCTAGGAGCAGGACCCAGTGGCATAATGGCTGCTGATGCTATTG TAACAGAATCTGGAGCTTTACATGTTGCTGGGGTACCCCTTGTTAATCCATCCACTGTAG TTGTTTGGGAAGTGATGCCAGGTCTTGGAAATGGTATTCAGGCAACTGCAAAGATAAATG CAGCAAGTTCTGTTCCTCCATCTCTGAATCCCCCTTCATGGCCGGGTTTTGCTCCACTAG CAGCCTACCTATTTTCTTTGCAAGATTATCTTGTTTCTGAGGGTGCACAGACAAAAAAGC TGACAGACAATAATGAGACTACTGAGGCTGCATCAATTCATTGTTGTCCAGTTTCTAATT TTTCAGCTTATGTCAGTCCAGAAGCAGCTGCACAGTCAGCTACTACTACCACCTGGGGGT CTGGGGTCACCTCAGTTGCTTTTGATCCGACTCGTGGAGGATCGGTCATTACAGTTGTAA TAGTTGAAGGGCAGTACATGTCTCCTTATGACCCTGATGAAGGACCTTCTATCACCGGAT GGAGGGTGCAATGCTGGGAATCTTCGTGCCAACCTGTTGTTCTTCATCCAATATTTGGAA GCCCTACTAGCTTAGGTGGGCAGCCTCCCATGCAAACTGTTTGGTCCACTAGAGTTAATA AAAGCATTCCACCAACGGAGGATCTTAAAAATCCTCAAACATATGTTCCGATGCCAACGA CATCAGATGAACGGAGCTCCTCTGAGTGCAGTGTTGACAGGGCGAACAGACTCAGCTTTG ACCCTTACGATCTTCCAAATGATGTTCGACAACTAGCTCAAATAGTTTATTCTGCTCATG GTGGTGAAGTTGCTGTTGCTTTCCTCCGTGGAGGAGTGCACATTTTCTCAGGTCCAAATT TTGATCAGGTTGACAGCTACCATGTCAATGTTGGCTCTGCTATTGCTCCACCAGCCTTTT CATCAAGCAGTTGCTGCTTAGCATCAGTTTGGCATGACACGCTCAAAGATCGAACCATAT TGAAGATAATACGTGTGCTTCCTCCTGCAATTCTTAGCACACAAACAAAGATCAGCTCAG CAGCATGGGAACGTGCAATAGCAGATAGATTTTGGTGGAGTTTATTGGCTGGAGTTGATT GGTGGGATGCTGTTGGTTGTACACAGAGTGCTGCCGAAGATGGTATAGTTTCACTTAACA GTGTGATAGCTTTTCTGGATGCGGACTTCCATTCTCTTCCGACTATGCAACAGAGGCAGC AGCACTGTCCTAACCTTGATAGGATTAAGTGTAGGTTGTTGGAAGGAACAAATGCCCAAG ATGTACGGGCACTTGTGTTGGACATGCAAGCAAGATTACTTCTGGATATGCTAGGCAAAG GAATCGAGTCTGCCCTTACAAATCCATCAACTCTGCTACCTGAGCCCTGGCAAGCTTCCA GTGATATGTTATCCAGCATCGATGCTGACAAAATGACTGTTGAGCCAGCTCTGCTTCCAA ACATCCAGGGTTACGTTGATGCTGTTCTTGATTTAGCATCACATTTCATAACTCGCTTGC GGCGTTATGCGAGTTTCTGTCGAACTCTGGCGAGCCATGTGGGGCCATCTTCTACCACAG GCACTTCTAGAAATATGGTTACAAGTCCAACAAACAGTTCTCCTTCGCCATCAAATAATC AAGGTAATCAAGGGGGATCAACATCTGCAACAGGGAACTCACAAATGCAGGAGTGGGTCC AAGGTGCAATTGCTAAGATTAGTAACAATTCTGATGGTGCTGCCACTGCAACACAGAATC CAATGAGCACGAGGACATCATTTATGCCCATCAGCATTAATACGGGCACTTTCCCTGGCA CACCTGCTGTGAGACTTATTGGGGATTGCCATTTTCTTCATAGATTATGTCAATTACTGC TATTTTGTCTGCTTTTCCGAAGAAGGCAATCACCAAGGTTACTTGCCAGTTCGCAAAAAA ATCAAGATTCTGCCATGCAGAAAATACAACACATGATGAATGCTAAGACAGAAGATAACA GTTCGACAGTAAGATCTGGTCTAGGGGCTGCCAAAGTAGAAGAAGGTCACTCTGCGCGTG GTGGACAATTTGTTCTTGGTGGTGCAAAGGGTCCTGAAGAAAATCCAATTGGCAAATCTG TTAGAATAGGTTCTGGCAACGCTGGGCAAGGTTATACTTCAGATGAGGTCAAGGTCCTTT TTCTTATACTGGTTGACCTATGTCGAAGGACATCTACCTTGCCGCATCCATTGCCTGCCT CTCAGGTTGGTTCCAGTAGCATTATCATAAGGCTGCACTACATTGACGGCAACTACACAG TGCTCCCTGAGGTAGTGGAAGCGTCTCTTGGTCCCCATATGCAGAATATGCCTCGTCCAC GAGGAGCTGATGCTGCTGGACTTCTACTTCGAGAATTAGAACTGCAACCTCCTGCGGAAG AATGGCATAGACGCAACATGTTTGGTGGACCCTGGTCAGAACCAGATGATTTTGGTCCAT TGGACAATATGCCTCGTCTAAAAATTAGTGGTTCCATCAACTCTCATTTGTCTGACATGG AAGTGGATGCTGTCAGTTCCATTGGGATTGATCTTTGGCCAAGAAAGCGTAGGTTATCTG AAAGAGATGCTGCATTTGGTCTGAAAACATCTGTAGGTCTTGGAGGTTATCTAGGTGTCA TGGGATCTCGAAGAGATGTTGTCACGGCTGTGTGGAGAACAGGTCTCGATGGTGATTGGT ACAAGTGCATACGTTGTTTGCGGCAAACTTGTGCATTTGCGCATCCTGGTGCCCCAAATC AGACAAATGAACGTGAGGCTTGGTGGATCAGTCGGTGGAGCCATGCTTGCCCAATGTGTG GGGGTTCATGGGTGAAAGTTGTTTGAGCGCTGTATTTGGCAACAACTTCGCTGCTAATTG CTTTCCTGACAAACATGTATGGAGTTCCATAGTTATGCATCTAACGCTAGGCTACTAGGA TCAGGTTCAGCCGTTCATGCCAGATGGTTGGTCTACAGGCACATGCACGTGGCACGACCA CTGTGGAAGTCTGGTAGAATTAGGAGCTATTCTGGGGGTCTGAATATGTAACTGACATTT GCATTATGCTGTCTAGTGTATTATTAACCAGTGACTTTCCTTG