Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032543_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:230037686:230040058:-1 gene:Zm00001d032543 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGTACCGGCTTTTCCGCCGCAGCTTCTCCATGGCTGCCGAGGGTTCCGCCGCCGCCGCC TCTTCCTCTCCACCCCCCTCCACCTCCATGTCCTCGACCCCGCGGCAACATCTGCCGGAC GAGCTGTACCGCCGCATCATGAATGTCGGGCGCCCAAGCATCCCGTTATCCCCCGTCCTG GAGCAATGGAATCAAGAAGGCCATACCGCCAAGAAGTTCGTCATCCAGGCCATCGTCAAG AAGCTCGTCGGCCTCCGCCGCTTCGCCCACGCACTCGAGCTGTCGTTCTGGATGACCGAC CGCAGGCACCTCCACCTTTCGGTCGGTGACGTCGCGTACCGGCTGGACCTAATCAGCAAG GTGCACGGCCTTGAGAAAGCCGTCGAGTACTTCGGCATGGTACCGAAGCAGCTGAGGAAG CCGCAGTGCTACGGCTCCCTCCTGAAATGCTATGTGGAGGCGAAGGCCGTCGACAAGGCT GAGGAGCACTTCGCGAAGATGCAGGAGATGGGGATGACGAGTTCTTACGCATACACTTGG ATGATGAAGCTTTACCTACAGACTGGGCAGCTTGAAAGAGTGCACGCCATGTTCCAGGAC ATGGAAGAGAAAGGTGTGAAGCCTGATACTTTCAGTGTGGAGGCTATGTTAGCTGCGTAC ATTGCTGCTGAAGATGTCCAGGGGGTTGGTAAGGTGCTCGACAAGGCCAATCCACACGAG AAGCTTGTGACTTGGCATGGGCATGCTTCGGCAGCGAGCTTGTTCATGAAATCTGGGATG CAGGTGGGGGCTGTCATGGCTCTCGTGGAAGCCGAGAGGCGGATATCTCCAAAGAGCAGT AGAATCGCATACGCTTTCTTACTCAAGACATATACTGAACTGGGGATGCATGCTGAGGCC GGACGCATTTGGAGTGTCTACAAATCCAAAGTGCCGCCGTGCAACACGATGTACATGTCG AGGCTAAGCGCGTTACTCAGGACGAACGACATTGATGGGGCGGAAGCGACACTGAAAGAG TGGGAAACGGTGCCTCTTCGCTATCATGATTTCAGATTAATCAACGTAATGGTCGATGCC TACTGCAGAGAAGGTCTCGTGGAGAAGGCAGTAGCTCTCGTGGATGGCGCCATCAAGAAA GGGAGGACACCTTACGCTAATACCTGGTATAAGTTGGCTGGTGGGTTTTTCAAAACTGGT CAGGTACCAGAAGCAGTGGACATGACAAGGAAGGCTCTTGATTCCGCGACTCCTCCATGG AGACCTGACCTCGCGAATGTGCTGATGAGCCTGAACCACTTTGTGGACCAGAAGGATGTA GGAGCAGCTGAGGAGATGGTGAGTACGCTACAGAAGCTGGTTCCTTTGACTAGGGATGTT TACCATTGCTTGCTGAAGACCTATGTCCGTGCGGGAAAGCCGCCGTCCGATCTGCTGGAG CGTATGAAGGAAGACGGCCTTGAGGCTGATGAGGAAACAGAGAGAATCCTCGCGGGAGAA TGCGAGCGAGTAGACATGCACCCGTTGTCAATCACTAACCATCTGATTGGTTAG

Peptide Sequence

PEP ID	Zm00001d032543_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:230037686:230040058:-1 gene:Zm00001d032543 transcript:Zm00001d032543_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MYRLFRRSFSMAAEGSAAAASSSPPPSTSMSSTPRQHLPDELYRRIMNVGRPSIPLSPVL EQWNQEGHTAKKFVIQAIVKKLVGLRRFAHALELSFWMTDRRHLHLSVGDVAYRLDLISK VHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVDKAEEHFAKMQEMGMTSSYAYTW MMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAMLAAYIAAEDVQGVGKVLDKANPHE KLVTWHGHASAASLFMKSGMQVGAVMALVEAERRISPKSSRIAYAFLLKTYTELGMHAEA GRIWSVYKSKVPPCNTMYMSRLSALLRTNDIDGAEATLKEWETVPLRYHDFRLINVMVDA YCREGLVEKAVALVDGAIKKGRTPYANTWYKLAGGFFKTGQVPEAVDMTRKALDSATPPW RPDLANVLMSLNHFVDQKDVGAAEEMVSTLQKLVPLTRDVYHCLLKTYVRAGKPPSDLLE RMKEDGLEADEETERILAGECERVDMHPLSITNHLIG

Transcript Sequence

Transcript ID	Zm00001d032543_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:230037686:230040058:-1 gene:Zm00001d032543 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	GCACTCTAGCGGCCCGCACAAAGCCGCCGGAGCGCCGCGCCACCATGTACCGGCTTTTCC GCCGCAGCTTCTCCATGGCTGCCGAGGGTTCCGCCGCCGCCGCCTCTTCCTCTCCACCCC CCTCCACCTCCATGTCCTCGACCCCGCGGCAACATCTGCCGGACGAGCTGTACCGCCGCA TCATGAATGTCGGGCGCCCAAGCATCCCGTTATCCCCCGTCCTGGAGCAATGGAATCAAG AAGGCCATACCGCCAAGAAGTTCGTCATCCAGGCCATCGTCAAGAAGCTCGTCGGCCTCC GCCGCTTCGCCCACGCACTCGAGCTGTCGTTCTGGATGACCGACCGCAGGCACCTCCACC TTTCGGTCGGTGACGTCGCGTACCGGCTGGACCTAATCAGCAAGGTGCACGGCCTTGAGA AAGCCGTCGAGTACTTCGGCATGGTACCGAAGCAGCTGAGGAAGCCGCAGTGCTACGGCT CCCTCCTGAAATGCTATGTGGAGGCGAAGGCCGTCGACAAGGCTGAGGAGCACTTCGCGA AGATGCAGGAGATGGGGATGACGAGTTCTTACGCATACACTTGGATGATGAAGCTTTACC TACAGACTGGGCAGCTTGAAAGAGTGCACGCCATGTTCCAGGACATGGAAGAGAAAGGTG TGAAGCCTGATACTTTCAGTGTGGAGGCTATGTTAGCTGCGTACATTGCTGCTGAAGATG TCCAGGGGGTTGGTAAGGTGCTCGACAAGGCCAATCCACACGAGAAGCTTGTGACTTGGC ATGGGCATGCTTCGGCAGCGAGCTTGTTCATGAAATCTGGGATGCAGGTGGGGGCTGTCA TGGCTCTCGTGGAAGCCGAGAGGCGGATATCTCCAAAGAGCAGTAGAATCGCATACGCTT TCTTACTCAAGACATATACTGAACTGGGGATGCATGCTGAGGCCGGACGCATTTGGAGTG TCTACAAATCCAAAGTGCCGCCGTGCAACACGATGTACATGTCGAGGCTAAGCGCGTTAC TCAGGACGAACGACATTGATGGGGCGGAAGCGACACTGAAAGAGTGGGAAACGGTGCCTC TTCGCTATCATGATTTCAGATTAATCAACGTAATGGTCGATGCCTACTGCAGAGAAGGTC TCGTGGAGAAGGCAGTAGCTCTCGTGGATGGCGCCATCAAGAAAGGGAGGACACCTTACG CTAATACCTGGTATAAGTTGGCTGGTGGGTTTTTCAAAACTGGTCAGGTACCAGAAGCAG TGGACATGACAAGGAAGGCTCTTGATTCCGCGACTCCTCCATGGAGACCTGACCTCGCGA ATGTGCTGATGAGCCTGAACCACTTTGTGGACCAGAAGGATGTAGGAGCAGCTGAGGAGA TGGTGAGTACGCTACAGAAGCTGGTTCCTTTGACTAGGGATGTTTACCATTGCTTGCTGA AGACCTATGTCCGTGCGGGAAAGCCGCCGTCCGATCTGCTGGAGCGTATGAAGGAAGACG GCCTTGAGGCTGATGAGGAAACAGAGAGAATCCTCGCGGGAGAATGCGAGCGAGTAGACA TGCACCCGTTGTCAATCACTAACCATCTGATTGGTTAGTCGCACCGTCTCATCCTGTATC AGTGCATGCATTGATTTTATTTAAGTCTTTGTTTGGTTGCCTGTATACTTAAAGCGTGAG CTGCATGAGTGGATGCAAACTAATTTATTTTGAGACCGTTTGACTGCATCTGCTCATACG TCAAAATCTTCGGTTTCTAGCCGGCCTGGATGGCACGAGCCTGGTTTGTGAGGCCCAGGC AACCAAACAGGCAGTAAGTAATCACTTTTCTCTGTTCATCTGTTCCTTTGTTCTTGAATT CTTCTCATTAGTTGAAGCCATGGCCACTGCTTACATAAATAAGACAGCACGGTCCTTTCT TGTGGGCTGCGTGCGTAGTTCCTCCACTGTGAGTAGGGATGGCAATGGGTACCCGAAATC TGATGGGTAAAAACCCTATTAGGGCACGGGTATGACGGATTTTGATACCCATGGGTATTT TATTGGGTCATTTGTAATGCCCATCGGGTACGGTGGGCGTGGGTATGTTCTCTATTGCCT CATACCCGCTACCCGATGGGGAACCCGCTAATATATGACACGTGGGTCTAGATTCAAATA TTAAGTATTGTGTATTGAACAATTAGATTTGAAGGCATGATTTTGTCCATAGTTTTGTAG AATCAATGCTATGTTTTGT