Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032539_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:229906825:229912962:-1 gene:Zm00001d032539 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 4-phosphate 5-kinase 9
Sequence	ATGACAGCCCCTGTGGCTCTTCCAAATGATCGAGCAGCAGTCTCCCATTCTGCAAGGGTT GACTTATTCCGAGACACTAGTTGCAACATAGAAAAGGAGGTGTTGGCCAGTATGGGAAAT GACCAAGATTCGACTGCTGCTGGAACAAATCCTGGTTTCAGAGTTGGGGAGATCAGGTTT GGCAATGGAGATGTTTATTCTGGCACATTGTTGGGGAACACACCAGAGGGTTCAGGCCAG TATCGCTGGTCAGATGGTTGCACCTATGACGGTGAGTGGACGAGAGGGATGAGGCATGGG CAAGGAAAGACGCAATGGCCATCTGGAGCCACCTATGAGGGCGAGTATTCTCGCGGCTAT GTATACGGTGAAGGCACCTATACGGGTCCAGATAAAATCATCTACAAGGGACGGTGGAAG TTGAATCGCAAGCATGGGCTTGGATATCAGACATATCCAAATGGAGACACGTTTGAAGGT TCGTGGATTCAGGGAGAAATAGTAGGTCACGGGAAGTACACATGGGCAAATGAGGACACT TACGTTGGCAACATGAAAAGTGGCAGGATGTCAGGGAAAGGAACTCTTACATGGAAAAAT GGGGACTCATATGAGGGTAACTGGATAGATGGCATGATGCATGGGTATGGAATCTATACA TGGAATGAATGCGGGTATTACATTGGAACATGGACAAGGGGACTGAAGGATGGGAAAGGT AAATTCTATCCGGAAGGTTGCAGAGTTCCTGTTAACGATGAGCTGTATATCAAAAATCTA AGAAACCGTGGTGTACTGCCTGATATTAGAAGGCAGAATCATGGCTCACGCATACTTCAC TCTTCCTCGGTTGACATGGGGAACATGAAGGTTGGTATAACCAGGCAATCTTCAGATGTT TTGTACAAAAGGAATCCAACTGAGCAGCCTCCTTTGAAGAATGTGTCTTTGGAAAGACGG TGGAGCCTTGAGGTGGCTATTGAAAAGTTTATTGGCCATGAATCGATTGAAAGTTCTGGT CAAGAAAGCTTGGAAAACTTGAGTGATTCTCGTATGCCCATACTGGAAAGAGAATACATG CAAGGCGTTCTAATCAGTGAGGTGGTTCTTGACAGGAGTTTTTCAGACTCCTCAAAGAAG ACAAAACGCCGCCAGAAGAAAATGGTAAGGGACACAAAAAGGCCTGGAGAGGCGATAATT AAGGGACACAGAAGCTATGATTTAATGCTCAGCCTGCAGATTGGAATCAGGTACACAGTT GGGAAGATTACACCAATTCAAAAACGTGAAGTTCATGCTTCAGATTTTGGACCAACAGCA AGTTTCTGGATGAATTTCTCAAAAGAAGGATCTCGGCTTACTCCTTCACATTCAGCGGAA GATTTTAAATGGAAAGACTACTGTCCCATGGTTTTCAGGAATTTGAGAGAGATGTTCAAG ATTGATGCTGCAGACTATATGATCTCCATATGCGGAAACTCTGCTCTTAGGCAACTATCT TCCCCTGGAAAGAGTGGAAGTGTCTTTTTCTTGTCACAAGATGATAGATTCATGATTAAG ACTCTCCGAGAATCTGAAGTGCAGGTTCTTTTACGAATGCTTCCAAAGTATTATGATCAT GTCCGTACCTATGAGAACACCCTCATAACCAAGTTTTTTGGCCTCCACAGGGTGAAACCT TCTAGTGGCCAAATGTTCCGGTTTGTTGTAATGGGAAACATGTTTTGCACTGAATTGAGA ATTCACCGGAGGTTTGATTTGAAAGGCTCGTCTTTAGGCCGCTCTACTGACAAAATTGAA ATTGACGAGAACACAACTCTGAAGGATTTGGATCTTAATTATTCCTTTTATCTTGAACCT TCCTGGCGTGAGGCTCTACTGAAGCAGATTGAAACAGATAGTGATTTTTTGAGAACACAG CGGATAATGGATTACAGCCTACTGCTTGGTGTCCATTATAGAGCTCCACAGCACTTGCGG ACACGTGCATCTTATCACCGGAGCATGGCAGCAGATAGATTGACCGTTGTTTCTGAAGAA GATGCTCAGGAGGAGGATGCCCTTAGCCATCCAGAAGGATTAGTCCTGGTTCAAAGCAGT GGCGAGAACAGTGTTGTTGTTGGTCCTCACATAAGAGGCAGCCGTTTGCGTGCATCGGCA GCTGGATTTGGCGAGGTAGACCTGCTGCTGCCTGGTACCGCCAGGCTTCAGATCCAGCTA GGAGTTAACATGCCTGCAAGGGCAGAGCAAATCTCCAAGGAAGACGGAAGCAAATCATTT CGCGAGGTGTACGATGTCGTGCTTTACCTGGGCATCATTGACATATTGCAAGAGTACAAC AAGTCAAAGAAAATCGAGCACGCTGTCAAGTCCATGCAATATGACTCTGTCTCCATCTCT GCCGTCAACCCCCGGTTCTACTCGGAGCGTTTCTTGAAGTTCATCCAGACCGTCTTCCCC GAGAATTCATAG

Peptide Sequence

PEP ID	Zm00001d032539_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:229906825:229912962:-1 gene:Zm00001d032539 transcript:Zm00001d032539_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 4-phosphate 5-kinase 9
Sequence	MTAPVALPNDRAAVSHSARVDLFRDTSCNIEKEVLASMGNDQDSTAAGTNPGFRVGEIRF GNGDVYSGTLLGNTPEGSGQYRWSDGCTYDGEWTRGMRHGQGKTQWPSGATYEGEYSRGY VYGEGTYTGPDKIIYKGRWKLNRKHGLGYQTYPNGDTFEGSWIQGEIVGHGKYTWANEDT YVGNMKSGRMSGKGTLTWKNGDSYEGNWIDGMMHGYGIYTWNECGYYIGTWTRGLKDGKG KFYPEGCRVPVNDELYIKNLRNRGVLPDIRRQNHGSRILHSSSVDMGNMKVGITRQSSDV LYKRNPTEQPPLKNVSLERRWSLEVAIEKFIGHESIESSGQESLENLSDSRMPILEREYM QGVLISEVVLDRSFSDSSKKTKRRQKKMVRDTKRPGEAIIKGHRSYDLMLSLQIGIRYTV GKITPIQKREVHASDFGPTASFWMNFSKEGSRLTPSHSAEDFKWKDYCPMVFRNLREMFK IDAADYMISICGNSALRQLSSPGKSGSVFFLSQDDRFMIKTLRESEVQVLLRMLPKYYDH VRTYENTLITKFFGLHRVKPSSGQMFRFVVMGNMFCTELRIHRRFDLKGSSLGRSTDKIE IDENTTLKDLDLNYSFYLEPSWREALLKQIETDSDFLRTQRIMDYSLLLGVHYRAPQHLR TRASYHRSMAADRLTVVSEEDAQEEDALSHPEGLVLVQSSGENSVVVGPHIRGSRLRASA AGFGEVDLLLPGTARLQIQLGVNMPARAEQISKEDGSKSFREVYDVVLYLGIIDILQEYN KSKKIEHAVKSMQYDSVSISAVNPRFYSERFLKFIQTVFPENS

Transcript Sequence

Transcript ID	Zm00001d032539_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:229906825:229912962:-1 gene:Zm00001d032539 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 4-phosphate 5-kinase 9
Sequence	GTCTCCCACGAGTCCACGACGACGATCGGCGAGCCAGTCCAAGACCGCAAGAGGCCAAAT CCAATCGCGAACCACCGCCGGCGCCATCGTCTACGTCTACTACCTGCTCCCGCCCAGAGG CCGCAGCATCCACCACTCGAGGACTTGCAGAGTCTGCAGCAGCAGCTTCAGCTGGCCAGA CTCCGTCCGCCGATCAACACACGGGCACAACGCCTCCCGTTTCCTCGTTTCGAGGCTGCA CCGCGCCGCCTCCAAGACGCCGGGAGCCTCATCGCCTCCTCTGGCGAAAAACCGCTTCTC TCCGGCGAGCTGCCTCCGTTTCCGGGTGATCGAGTCTACGCGCGCATCGCCTCTTCCCAA GGCAGGATAGGATCCCTTATCGGCCTGACGCGATTCGTGGATCCGACGGCGAGGTCTGCG CCGTCCACAGGCCACAGCTTACAGCACCGCTCCTCCCCTCTCCTTGTCCTTACTCTGGCA GCGCAACCCTCCCTGCTTCGACTGTCCTTTTTTTCCACATGGAGACTCACTAGACTACTA GAGTTGTCCCTCCGCTAGCCGCACGGATCATCTCCGTCCTCACCTATTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCGCTCTGCAGGTCTTGGAGG TAGTGCCGTCGACGAGGCATCTCCACCCCTCCGGCGAGCTCCCCTTCCAAAAAGTGGTGA GGCAGTGCTTTGGATATTAGCTTTTGCATTTTAGTGGATCGGTACTCCCAGGGGTTATGC ATGACAGCCCCTGTGGCTCTTCCAAATGATCGAGCAGCAGTCTCCCATTCTGCAAGGGTT GACTTATTCCGAGACACTAGTTGCAACATAGAAAAGGAGGTGTTGGCCAGTATGGGAAAT GACCAAGATTCGACTGCTGCTGGAACAAATCCTGGTTTCAGAGTTGGGGAGATCAGGTTT GGCAATGGAGATGTTTATTCTGGCACATTGTTGGGGAACACACCAGAGGGTTCAGGCCAG TATCGCTGGTCAGATGGTTGCACCTATGACGGTGAGTGGACGAGAGGGATGAGGCATGGG CAAGGAAAGACGCAATGGCCATCTGGAGCCACCTATGAGGGCGAGTATTCTCGCGGCTAT GTATACGGTGAAGGCACCTATACGGGTCCAGATAAAATCATCTACAAGGGACGGTGGAAG TTGAATCGCAAGCATGGGCTTGGATATCAGACATATCCAAATGGAGACACGTTTGAAGGT TCGTGGATTCAGGGAGAAATAGTAGGTCACGGGAAGTACACATGGGCAAATGAGGACACT TACGTTGGCAACATGAAAAGTGGCAGGATGTCAGGGAAAGGAACTCTTACATGGAAAAAT GGGGACTCATATGAGGGTAACTGGATAGATGGCATGATGCATGGGTATGGAATCTATACA TGGAATGAATGCGGGTATTACATTGGAACATGGACAAGGGGACTGAAGGATGGGAAAGGT AAATTCTATCCGGAAGGTTGCAGAGTTCCTGTTAACGATGAGCTGTATATCAAAAATCTA AGAAACCGTGGTGTACTGCCTGATATTAGAAGGCAGAATCATGGCTCACGCATACTTCAC TCTTCCTCGGTTGACATGGGGAACATGAAGGTTGGTATAACCAGGCAATCTTCAGATGTT TTGTACAAAAGGAATCCAACTGAGCAGCCTCCTTTGAAGAATGTGTCTTTGGAAAGACGG TGGAGCCTTGAGGTGGCTATTGAAAAGTTTATTGGCCATGAATCGATTGAAAGTTCTGGT CAAGAAAGCTTGGAAAACTTGAGTGATTCTCGTATGCCCATACTGGAAAGAGAATACATG CAAGGCGTTCTAATCAGTGAGGTGGTTCTTGACAGGAGTTTTTCAGACTCCTCAAAGAAG ACAAAACGCCGCCAGAAGAAAATGGTAAGGGACACAAAAAGGCCTGGAGAGGCGATAATT AAGGGACACAGAAGCTATGATTTAATGCTCAGCCTGCAGATTGGAATCAGGTACACAGTT GGGAAGATTACACCAATTCAAAAACGTGAAGTTCATGCTTCAGATTTTGGACCAACAGCA AGTTTCTGGATGAATTTCTCAAAAGAAGGATCTCGGCTTACTCCTTCACATTCAGCGGAA GATTTTAAATGGAAAGACTACTGTCCCATGGTTTTCAGGAATTTGAGAGAGATGTTCAAG ATTGATGCTGCAGACTATATGATCTCCATATGCGGAAACTCTGCTCTTAGGCAACTATCT TCCCCTGGAAAGAGTGGAAGTGTCTTTTTCTTGTCACAAGATGATAGATTCATGATTAAG ACTCTCCGAGAATCTGAAGTGCAGGTTCTTTTACGAATGCTTCCAAAGTATTATGATCAT GTCCGTACCTATGAGAACACCCTCATAACCAAGTTTTTTGGCCTCCACAGGGTGAAACCT TCTAGTGGCCAAATGTTCCGGTTTGTTGTAATGGGAAACATGTTTTGCACTGAATTGAGA ATTCACCGGAGGTTTGATTTGAAAGGCTCGTCTTTAGGCCGCTCTACTGACAAAATTGAA ATTGACGAGAACACAACTCTGAAGGATTTGGATCTTAATTATTCCTTTTATCTTGAACCT TCCTGGCGTGAGGCTCTACTGAAGCAGATTGAAACAGATAGTGATTTTTTGAGAACACAG CGGATAATGGATTACAGCCTACTGCTTGGTGTCCATTATAGAGCTCCACAGCACTTGCGG ACACGTGCATCTTATCACCGGAGCATGGCAGCAGATAGATTGACCGTTGTTTCTGAAGAA GATGCTCAGGAGGAGGATGCCCTTAGCCATCCAGAAGGATTAGTCCTGGTTCAAAGCAGT GGCGAGAACAGTGTTGTTGTTGGTCCTCACATAAGAGGCAGCCGTTTGCGTGCATCGGCA GCTGGATTTGGCGAGGTAGACCTGCTGCTGCCTGGTACCGCCAGGCTTCAGATCCAGCTA GGAGTTAACATGCCTGCAAGGGCAGAGCAAATCTCCAAGGAAGACGGAAGCAAATCATTT CGCGAGGTGTACGATGTCGTGCTTTACCTGGGCATCATTGACATATTGCAAGAGTACAAC AAGTCAAAGAAAATCGAGCACGCTGTCAAGTCCATGCAATATGACTCTGTCTCCATCTCT GCCGTCAACCCCCGGTTCTACTCGGAGCGTTTCTTGAAGTTCATCCAGACCGTCTTCCCC GAGAATTCATAGCTCATGAGTCAATACTTGTTCGAAACATGAGACCTGATGATTCCCACG GCAGTCCCTGTCTCCAAAATTGGAACTTGCATGCATCAGAAAAGCATTAGTCCCTTCTT