Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032530_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:229718687:229725690:1 gene:Zm00001d032530 gene_biotype:protein_coding transcript_biotype:protein_coding description:F-box/LRR-repeat protein

Sequence

ATGGTCACTCCCTATTTGCCATCATCGCACAACCATCGCCGAAGGCTGCCAATTCTATTG
AAAATAGGATTTTTGTTAATGATGGGAGAAAATAAATTGATGGGCAAAAGATGGGAGGAC
ATGGACACTGATGTCCTTGTGAAGATATTCAAGGAACTAAATTTGGTTGAGTTGTCACCG
ACAAGAGCATCACCATATATTTGGGTTGATGATAGGTCTGACAGGAGACTTGCAAGAATA
CTACGGGTGGCTATGGCAATTAGCTGTGGGAACGTCAACTGCATGATATTTCATTACAAT
TTGTTCATGAAAGATGAGCACCTTCATTTCATCTCAGAAAGATCTCCTCATTTAAAACGG
TTGGTTATGCCAGCATGGAACCGCATCACCAAAGTGGGAATATGTAATGCTATCCAAAGG
TGGCAGGCGCTGGAGTCCTTGACAATGCCTACCATCGGACATCCTCCATATATTATGGAA
GAGATAGCAAGGAGCTGCAAGAATTTCACAGAACTTAAGATCATGGGCTCATTTGATCAA
CAATTTGCCTCGGCGATTTTGCAGTTCCTTCCAAAGCTGAAAGTGCTGAGCCTTCGTTGC
TCGAAGGTGTCCATGGATGCACTGCAATGTTTGCTGAACTCGATGGAGTATCTTGAGGTT
CTGAATATTTCACACTGCCTGCTGTTGGTTGTGGCGGCAAATGGGCGGAAGCAAGTGGTT
CATGAACTGGACAGCCAAATTCTCGAGAGAGCTTCACGGCTGCGTGAATTCCACTACTGC
CAAAGTAGGTTGTGCGTCGCGTGCCAGCGGATGGTGGTGGATGAAGGCATCATGCGCTGG
TACAGGTACGAGGATTGGTTTTGGCGTCGGGATGAGGTGAGGTCCCTTGATCTGCAAGAT
TATGGGAAGCTGTTTGATGTTGGTTGCGAGAGGTTGACGTCTGTGGATTAG

Peptide Sequence

PEP ID

Zm00001d032530_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:229718687:229725690:1 gene:Zm00001d032530 transcript:Zm00001d032530_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:F-box/LRR-repeat protein

Sequence

MVTPYLPSSHNHRRRLPILLKIGFLLMMGENKLMGKRWEDMDTDVLVKIFKELNLVELSP
TRASPYIWVDDRSDRRLARILRVAMAISCGNVNCMIFHYNLFMKDEHLHFISERSPHLKR
LVMPAWNRITKVGICNAIQRWQALESLTMPTIGHPPYIMEEIARSCKNFTELKIMGSFDQ
QFASAILQFLPKLKVLSLRCSKVSMDALQCLLNSMEYLEVLNISHCLLLVVAANGRKQVV
HELDSQILERASRLREFHYCQSRLCVACQRMVVDEGIMRWYRYEDWFWRRDEVRSLDLQD
YGKLFDVGCERLTSVD

Transcript Sequence

Transcript ID

Zm00001d032530_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:229718687:229725690:1 gene:Zm00001d032530 gene_biotype:protein_coding transcript_biotype:protein_coding description:F-box/LRR-repeat protein

Sequence

TTTCAACTAAATATGTGCTCTATCTAAACCTCCTCCCGAAAAAAAGACGGACTTTTTCTT
AGAGGAGCCCTAGAGCTGAAACCTGCAGAGGAAGCCCCGTTAATCTATTCTCCTTGCATC
CACACCGACGGGCAATTGGTGCGCCGTCTTCTCCGTCCGCGGCGGCCATCTTGGTAGCGG
CCCGCATCCCCTCGGCCCTCCAAATCAACGAACCAGCGCGTCCCCGCTCCTCCCCACGCC
ACGGGAAACTTCCAGCAAAAGGTCGCGCCATCGATAAGGGGAGAAAAGGAGAAGTGTCGC
CGTCCCCGTCAGCGACGGCGCTGGTACCGACGGTCCCCGCGTCGTGTGCCTTCCTCCTCC
GCGAGTTCGACGACCCGCTGTGCGTCTGCTCTCTTCCGCGCGCCCAATCCTCGTCGAGTC
GTCGTGCCGCTGATTGACACAGCCTAGATGTGACAGATCTACTTTGTTCCTTGCTACTTT
TTGGCATGGTCACTCCCTATTTGCCATCATCGCACAACCATCGCCGAAGGCTGCCAATTC
TATTGAAAATAGGATTTTTGTTAATGATGGGAGAAAATAAATTGATGGGCAAAAGATGGG
AGGACATGGACACTGATGTCCTTGTGAAGATATTCAAGGAACTAAATTTGGTTGAGTTGT
CACCGACAAGAGCATCACCATATATTTGGGTTGATGATAGGTCTGACAGGAGACTTGCAA
GAATACTACGGGTGGCTATGGCAATTAGCTGTGGGAACGTCAACTGCATGATATTTCATT
ACAATTTGTTCATGAAAGATGAGCACCTTCATTTCATCTCAGAAAGATCTCCTCATTTAA
AACGGTTGGTTATGCCAGCATGGAACCGCATCACCAAAGTGGGAATATGTAATGCTATCC
AAAGGTGGCAGGCGCTGGAGTCCTTGACAATGCCTACCATCGGACATCCTCCATATATTA
TGGAAGAGATAGCAAGGAGCTGCAAGAATTTCACAGAACTTAAGATCATGGGCTCATTTG
ATCAACAATTTGCCTCGGCGATTTTGCAGTTCCTTCCAAAGCTGAAAGTGCTGAGCCTTC
GTTGCTCGAAGGTGTCCATGGATGCACTGCAATGTTTGCTGAACTCGATGGAGTATCTTG
AGGTTCTGAATATTTCACACTGCCTGCTGTTGGTTGTGGCGGCAAATGGGCGGAAGCAAG
TGGTTCATGAACTGGACAGCCAAATTCTCGAGAGAGCTTCACGGCTGCGTGAATTCCACT
ACTGCCAAAGTAGGTTGTGCGTCGCGTGCCAGCGGATGGTGGTGGATGAAGGCATCATGC
GCTGGTACAGGTACGAGGATTGGTTTTGGCGTCGGGATGAGGTGAGGTCCCTTGATCTGC
AAGATTATGGGAAGCTGTTTGATGTTGGTTGCGAGAGGTTGACGTCTGTGGATTAGATGC
TAATAATAGGGGAGCAAAACCTGCCCTCCTCAGTCTAGAAACTTGTTTATTGGCATTCAT
AAAACATAGCAAGTGACGAGGGGTAACAGTAGATTAATAATATCGATAACAATGTGCGTG
AATGGTGTGCGCGTGTTTAGCTACTGTAAATCCATGAATAGTTCGTGTTGTTTGGAGAAG
TTTGTTATAGCCAGTATGGTGTCAAGAGTATCTCTACAATTTGTTTTTAAGTGATGTGGC
ATTGGACATGAATAGTATTTGGCTTTATACGCTAGAGCGTAAAAGGCTAGACCTGATACT
GCTAGTTAGGCTGTGGCCAGTGCACACGCAAAACACTGTTTTATATTGGAGATTGTACTG
TTTATAGGATATGGAGTTTGAAATAGGATGTGAGATAGGTAAAACAGTTGGAGATAGTCT
TATGC