Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032464_T060
CDS Infomation

cds chromosome:B73_RefGen_v4:1:227542464:227553825:1 gene:Zm00001d032464 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kinesin-like protein KIN-7D mitochondrial
Sequence

ATGATCCAAGATAGTCCTGGAAGAGAATTTTTGCTCCGTGTGTCGTACCTTGAAATCTAT
AATGAGGTGATAAATGATCTACTTGATCCTACTGGCCAAAATTTGCGTGTGCGGGAGGAT
GCACAGGGAACCTATGTAGAAGGAATAAAAGAAGAAGTAGTTCTGTCTCCAGGACATGCT
CTTTCTTTTATTGCAGCGGGTGAAGAACATCGGCATGTTGGCTCTAACAACTTCAACTTA
TTTAGCAGCCGAAGTCATACTATTTTCACATTGATGATTGAAAGTAGCGCCCGTGGTGAT
GAGTATGATGGCGTCATGTATTCACAGCTCAATTTGATTGATCTAGCTGGCTCTGAGAGC
TCCAAGACAGAGACTACAGGGCTAAGAAGAAGGGAAGGGTCATACATTAACAAGAGCCTT
TTAACGCTTGGAACAGTCATTGGCAAGCTCAGTGAAGGGAGGGCAACACATATACCCTAT
CGTGATTCTAAGTTGACCCGTCTGCTACAGTCATCATTAAGTGGCCATGGTCATGTCTCA
CTAATTTGCACAATTACCCCAGCATCAAGTAACATGGAAGAAACCCATAATACATTGAAA
TTTGCAAGCAGAGCAAAACGTGTTGAAATTTACGCCTCTCGTAACCGGATAATTGATGAG
AAATCATTGATCAAGAAGTATCAGAAAGAAATATCCTCTCTAAAGCAAGAACTCGATCAG
CTAAGGAGAGGAATTGTTGGTGGTGCCAGCCAGGAAGAAATTATGAGTTTACGTCAGCAG
TTGGAGGAGGGTCAGGTCAAGATGCAGTCTCGTCTAGAGGAGGAAGAGGAAGCGAAAGCT
GCTCTAATGAGCAGGATACAACGCTTGACCAAGTTGATACTTGTTTCCACCAAAAACAAT
ATTCCTGCCTTGACAGATGGTCATCAGCGGCATAATTCTGTCAGCGAGCAAGATAAGTTA
AGCACTTCACAAGATAGCTCTACACTTGTCCAAAATGAGGGCACAACAAAAGACCACCTA
CCAGACTCCTTAGATGAGATCAACCAATTAAGATCTGGCAGTGGTGAACATTCTTCAGCT
ACTTGTTCTGCTACAGATTCAATGCAGGCAGGATTCACGGCATCAGATCATATGGACCTA
CTGATTGAGCAAATTAAGATGCTCGCTGGGGAGGTTGCATTTGGTACCAGTTCGCTGAAA
AGGCTAATCGAACAGTCCATAGATGATCCTGAAGGGTCAAAGGACCAAATAGAGAATTTA
GAGCGTGAAATCCAGCAAAAGAGAAGACATATGCGAGCCTTGGAAAAACAAATCATGGAA
AGTGGCGAGGCATCAGTTGCTAATGCATCCATGGTGGATATGCAGCAGACTATTACAAAA
CTAACTGCTCAGTGCAGTGAGAAGGCTTTTGAGTTAGAGTTAAAGTCAGCTGATAATCGT
GTTCTCCAGGAGCAGCTACAACAGAAGAATGCGGAAGTCAACGATTTACAAGAAAAAGTT
TTTCACCTTGAGCAACAACTCTCCGCAAAAGTGGGTATATCCCCTGAGCAGGAAACTGAT
TGCGCACAGCAGGAGGCTATTGATTTGAAATCTAAACTTCAGTCCAAGGAAGCTGAATTC
GAAAAGCTAAAATTCGAGCATCTGAAAATTACTGAGGAACAGTGCGACTTGATCAATCAA
AACCATAAATTAAGTGAGGAAGCTGCATATGCAAAAGAATTGGCATCTTCGGCTGCTGTT
GAACTCAAGAATTTGGCTGAAGAAGTTACAAAGCTATCTGTACTAAATGTGAAGCAAGCA
AAGGAGTTACTAGTTGCTCAGGAGATGGCACATTCAAGGGTTCATGGTAGAAAGGGTCGT
ACAACCAGTAGGGGTAGGGACGAGGTTGGGACATGGAGCCTTGATTTAGAGGACATGAAA
ATAGAGCTACAGGCCAGAAGACAGAGGGAGGCTGCTTTGGAAGCTGCTTTGGCAGAGAAG
GAGCTTCTCGAAGAGGAGTACAAGAAAAAGTTTGACGAGGCAAAGAAAAAGGAACTGTCT
TTGGAAAACGATCTAGCAGGCATGTGGGTTCTTGTTGCTAAGTTAAAAAGAGGGGCTTTA
GGCATATCCGATTTTAATGTTGATGATCGAACTGTTAACCTAGCTGATATAACTAATGGC
ACAAAGGAAAACAAAGGTGAAAAGAATTTTGCTCTAGTTGAGAAGCAAGTTTCAGAAGAT
TCTGTGAAGTCGCTGAGCACAGAAGAACATAGAAGTCCAGAGTTTGAACCACTTCTTGTT
CGTCTGAAGGCTAAAATTCAGGAGATGAAGGAAAAGGACACTGATCCCCTGAGCGATAAA
GATGGGAACTCACATGTCTGCAAAGTTTGCTTCGAATCTGCAACCGCTGCAGTATTGCTT
CCTTGCCGGCATTTTTGCTTGTGCAAGCCTTGCTCGCTTGCCTGTTCAGAGTGCCCTCTG
TGCCGCACAAGAATAGCAGACAGGATAATCACGTTCACATGA

Peptide Sequence

PEP ID

Zm00001d032464_P060
PEP Infomation

pep chromosome:B73_RefGen_v4:1:227542464:227553825:1 gene:Zm00001d032464 transcript:Zm00001d032464_T060 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kinesin-like protein KIN-7D mitochondrial
Sequence

MIQDSPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHA
LSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSARGDEYDGVMYSQLNLIDLAGSES
SKTETTGLRRREGSYINKSLLTLGTVIGKLSEGRATHIPYRDSKLTRLLQSSLSGHGHVS
LICTITPASSNMEETHNTLKFASRAKRVEIYASRNRIIDEKSLIKKYQKEISSLKQELDQ
LRRGIVGGASQEEIMSLRQQLEEGQVKMQSRLEEEEEAKAALMSRIQRLTKLILVSTKNN
IPALTDGHQRHNSVSEQDKLSTSQDSSTLVQNEGTTKDHLPDSLDEINQLRSGSGEHSSA
TCSATDSMQAGFTASDHMDLLIEQIKMLAGEVAFGTSSLKRLIEQSIDDPEGSKDQIENL
EREIQQKRRHMRALEKQIMESGEASVANASMVDMQQTITKLTAQCSEKAFELELKSADNR
VLQEQLQQKNAEVNDLQEKVFHLEQQLSAKVGISPEQETDCAQQEAIDLKSKLQSKEAEF
EKLKFEHLKITEEQCDLINQNHKLSEEAAYAKELASSAAVELKNLAEEVTKLSVLNVKQA
KELLVAQEMAHSRVHGRKGRTTSRGRDEVGTWSLDLEDMKIELQARRQREAALEAALAEK
ELLEEEYKKKFDEAKKKELSLENDLAGMWVLVAKLKRGALGISDFNVDDRTVNLADITNG
TKENKGEKNFALVEKQVSEDSVKSLSTEEHRSPEFEPLLVRLKAKIQEMKEKDTDPLSDK
DGNSHVCKVCFESATAAVLLPCRHFCLCKPCSLACSECPLCRTRIADRIITFT

Transcript Sequence

Transcript ID

Zm00001d032464_T060
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:227542464:227553825:1 gene:Zm00001d032464 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kinesin-like protein KIN-7D mitochondrial
Sequence

ATTGCTACTGCAAGCTATAGCAAATATGATTTCTGAATGCAACAAGGACATATTCATTTT
CACGAATAATCTTTGTAAATATATAGTTGTTTGATTTTTTGAAGGCATCATTATTTTTTA
TCCCATTGTTTCCCTAATCTTTTTTCAGGGCGAGCACAATTGTCCTGGAATAATCCCACT
AGCCATCAAGGATGTCTTCAGCATGATCCAAGATAGTCCTGGAAGAGAATTTTTGCTCCG
TGTGTCGTACCTTGAAATCTATAATGAGGTGATAAATGATCTACTTGATCCTACTGGCCA
AAATTTGCGTGTGCGGGAGGATGCACAGGGAACCTATGTAGAAGGAATAAAAGAAGAAGT
AGTTCTGTCTCCAGGACATGCTCTTTCTTTTATTGCAGCGGGTGAAGAACATCGGCATGT
TGGCTCTAACAACTTCAACTTATTTAGCAGCCGAAGTCATACTATTTTCACATTGATGAT
TGAAAGTAGCGCCCGTGGTGATGAGTATGATGGCGTCATGTATTCACAGCTCAATTTGAT
TGATCTAGCTGGCTCTGAGAGCTCCAAGACAGAGACTACAGGGCTAAGAAGAAGGGAAGG
GTCATACATTAACAAGAGCCTTTTAACGCTTGGAACAGTCATTGGCAAGCTCAGTGAAGG
GAGGGCAACACATATACCCTATCGTGATTCTAAGTTGACCCGTCTGCTACAGTCATCATT
AAGTGGCCATGGTCATGTCTCACTAATTTGCACAATTACCCCAGCATCAAGTAACATGGA
AGAAACCCATAATACATTGAAATTTGCAAGCAGAGCAAAACGTGTTGAAATTTACGCCTC
TCGTAACCGGATAATTGATGAGAAATCATTGATCAAGAAGTATCAGAAAGAAATATCCTC
TCTAAAGCAAGAACTCGATCAGCTAAGGAGAGGAATTGTTGGTGGTGCCAGCCAGGAAGA
AATTATGAGTTTACGTCAGCAGTTGGAGGAGGGTCAGGTCAAGATGCAGTCTCGTCTAGA
GGAGGAAGAGGAAGCGAAAGCTGCTCTAATGAGCAGGATACAACGCTTGACCAAGTTGAT
ACTTGTTTCCACCAAAAACAATATTCCTGCCTTGACAGATGGTCATCAGCGGCATAATTC
TGTCAGCGAGCAAGATAAGTTAAGCACTTCACAAGATAGCTCTACACTTGTCCAAAATGA
GGGCACAACAAAAGACCACCTACCAGACTCCTTAGATGAGATCAACCAATTAAGATCTGG
CAGTGGTGAACATTCTTCAGCTACTTGTTCTGCTACAGATTCAATGCAGGCAGGATTCAC
GGCATCAGATCATATGGACCTACTGATTGAGCAAATTAAGATGCTCGCTGGGGAGGTTGC
ATTTGGTACCAGTTCGCTGAAAAGGCTAATCGAACAGTCCATAGATGATCCTGAAGGGTC
AAAGGACCAAATAGAGAATTTAGAGCGTGAAATCCAGCAAAAGAGAAGACATATGCGAGC
CTTGGAAAAACAAATCATGGAAAGTGGCGAGGCATCAGTTGCTAATGCATCCATGGTGGA
TATGCAGCAGACTATTACAAAACTAACTGCTCAGTGCAGTGAGAAGGCTTTTGAGTTAGA
GTTAAAGTCAGCTGATAATCGTGTTCTCCAGGAGCAGCTACAACAGAAGAATGCGGAAGT
CAACGATTTACAAGAAAAAGTTTTTCACCTTGAGCAACAACTCTCCGCAAAAGTGGGTAT
ATCCCCTGAGCAGGAAACTGATTGCGCACAGCAGGAGGCTATTGATTTGAAATCTAAACT
TCAGTCCAAGGAAGCTGAATTCGAAAAGCTAAAATTCGAGCATCTGAAAATTACTGAGGA
ACAGTGCGACTTGATCAATCAAAACCATAAATTAAGTGAGGAAGCTGCATATGCAAAAGA
ATTGGCATCTTCGGCTGCTGTTGAACTCAAGAATTTGGCTGAAGAAGTTACAAAGCTATC
TGTACTAAATGTGAAGCAAGCAAAGGAGTTACTAGTTGCTCAGGAGATGGCACATTCAAG
GGTTCATGGTAGAAAGGGTCGTACAACCAGTAGGGGTAGGGACGAGGTTGGGACATGGAG
CCTTGATTTAGAGGACATGAAAATAGAGCTACAGGCCAGAAGACAGAGGGAGGCTGCTTT
GGAAGCTGCTTTGGCAGAGAAGGAGCTTCTCGAAGAGGAGTACAAGAAAAAGTTTGACGA
GGCAAAGAAAAAGGAACTGTCTTTGGAAAACGATCTAGCAGGCATGTGGGTTCTTGTTGC
TAAGTTAAAAAGAGGGGCTTTAGGCATATCCGATTTTAATGTTGATGATCGAACTGTTAA
CCTAGCTGATATAACTAATGGCACAAAGGAAAACAAAGGTGAAAAGAATTTTGCTCTAGT
TGAGAAGCAAGTTTCAGAAGATTCTGTGAAGTCGCTGAGCACAGAAGAACATAGAAGTCC
AGAGTTTGAACCACTTCTTGTTCGTCTGAAGGCTAAAATTCAGGAGATGAAGGAAAAGGA
CACTGATCCCCTGAGCGATAAAGATGGGAACTCACATGTCTGCAAAGTTTGCTTCGAATC
TGCAACCGCTGCAGTATTGCTTCCTTGCCGGCATTTTTGCTTGTGCAAGCCTTGCTCGCT
TGCCTGTTCAGAGTGCCCTCTGTGCCGCACAAGAATAGCAGACAGGATAATCACGTTCAC
ATGAACGGCGTGCTAGCTTCAGGTGCCAAACACTTAGATGCTTGCATGTTGGTGCTCATG
CCAACGCTATCCCTCTGAAATGTACCTAATGATGTGCTGTGTATCTCTGACAGGCCATTC
TGAAGCATGGCGCACTCTTGTAAAATGGTCGGTGGTATATGTTTCTCTTTTTTTCCTTAG
CAAAGAAGGTGCCTTTTATGTTCCTTCTGTGTTGTATCGCCATTCTTTGGGTTCCCCTAT
ATGGCTATATAGCTTCACCTTACGTTCTTT