Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032439_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:226422767:226426773:1 gene:Zm00001d032439 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA excision repair protein ERCC-1
Sequence	ATGGACGGGGGAAGAGAGCAGCAGGCGCCGCCGGAGTCGCAGCCCGGTAAGAACCTCATC AAGATCCCGTCCTATCAGGAGGTCTTCGGCACCGGCGCCTCCACCTCTTCCTCGAAGCCG CCATCCTACAACCCTCCTGTAGCCACCTCCGCCGCCGCCGCCGCTTCATCCTCGTCGTCG TCCTCGGGATCATTCTCGCAGGCTTTTTCTTTCCTCAAGTCCTCCGAGTTCTACTCACCT CCGCCGCCGCCGCCTCCCCAGCCCACCACCACCCCGAGGCCGACTCAAGCTAGCCCCTCA GCGCCGACTCCCCAAAGCAAGAACTCCATTCTCGTCAGTCATAGGCAGAGAGGAAACCCT CTGCTGAAGCACATTAGGAATGCTAGATGGACGTTCGCCGATGTCGTGCCGGACTATGTG CTTGGGCAATCGTCATGTGCCTTGTACTTAAGTATCAGGTACCATCTTCTACATCCAGAC TACTTGTACTATCGGATAAGAGAGCTGCAGAAGAATTTCAGGCTGCGTGTCATCTTGTGC CATGTTGATGTTGAAGATGTAATCAAGCCTTTGCATGAAATTACAAGAACAGCGCTGCTT CATGACTGCACCCTTTTGTGTGGTTGGAGCCTGGAGGAATGTGGTCGGTACTTGGAGACT ATTAAAGTATATGAAAACAAGCCAGCTGACAGTATTCGTGAGCACATGGATAACGACTAT CTATCACGGGTATATATACTTCCTGGGAACCCTCTCCAGAACAAGATAATTTGA

Peptide Sequence

PEP ID	Zm00001d032439_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:226422767:226426773:1 gene:Zm00001d032439 transcript:Zm00001d032439_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA excision repair protein ERCC-1
Sequence	MDGGREQQAPPESQPGKNLIKIPSYQEVFGTGASTSSSKPPSYNPPVATSAAAAASSSSS SSGSFSQAFSFLKSSEFYSPPPPPPPQPTTTPRPTQASPSAPTPQSKNSILVSHRQRGNP LLKHIRNARWTFADVVPDYVLGQSSCALYLSIRYHLLHPDYLYYRIRELQKNFRLRVILC HVDVEDVIKPLHEITRTALLHDCTLLCGWSLEECGRYLETIKVYENKPADSIREHMDNDY LSRVYILPGNPLQNKII

Transcript Sequence

Transcript ID	Zm00001d032439_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:226422767:226426773:1 gene:Zm00001d032439 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA excision repair protein ERCC-1
Sequence	ACGCCTCTGGGTCTCCCGCGCTGCCATGGACGGGGGAAGAGAGCAGCAGGCGCCGCCGGA GTCGCAGCCCGGTAAGAACCTCATCAAGATCCCGTCCTATCAGGAGGTCTTCGGCACCGG CGCCTCCACCTCTTCCTCGAAGCCGCCATCCTACAACCCTCCTGTAGCCACCTCCGCCGC CGCCGCCGCTTCATCCTCGTCGTCGTCCTCGGGATCATTCTCGCAGGCTTTTTCTTTCCT CAAGTCCTCCGAGTTCTACTCACCTCCGCCGCCGCCGCCTCCCCAGCCCACCACCACCCC GAGGCCGACTCAAGCTAGCCCCTCAGCGCCGACTCCCCAAAGCAAGAACTCCATTCTCGT CAGTCATAGGCAGAGAGGAAACCCTCTGCTGAAGCACATTAGGAATGCTAGATGGACGTT CGCCGATGTCGTGCCGGACTATGTGCTTGGGCAATCGTCATGTGCCTTGTACTTAAGTAT CAGGTACCATCTTCTACATCCAGACTACTTGTACTATCGGATAAGAGAGCTGCAGAAGAA TTTCAGGCTGCGTGTCATCTTGTGCCATGTTGATGTTGAAGATGTAATCAAGCCTTTGCA TGAAATTACAAGAACAGCGCTGCTTCATGACTGCACCCTTTTGTGTGGTTGGAGCCTGGA GGAATGTGGTCGGTACTTGGAGACTATTAAAGTATATGAAAACAAGCCAGCTGACAGTAT TCGTGAGCACATGGATAACGACTATCTATCACGGGTATATATACTTCCTGGGAACCCTCT CCAGAACAAGATAATTTGATGATCTATGTCATCGGTTGATGAGGAAAACTGGTACTCCCT ACGTCCCAAAATATTAGTCGATAATGTTTTCAAGTCGGACTACTTGTTGGTCGCTCTGGC TAACTGACTTGGGCGATTAATCACGACTAATCATGATTAATTGGCCGACTTGAAAACATA ACATTTTAGCTCTTGATTTTTATGTCTATGTTCAAATGGATGATGATGAATCTAAACACA TATATAAAATAAATACATTAATTATTGTATGAATCAACTAAAAAGGTAAAACAAATTTAT TTTGGGGGGAGTATTAAACATTGCTATCATGATTAGCAAGAAATATACCCCTGTGGTGCG CTCTTTCTTTCTTTCTTTAGAATTTTCTATACGCGCAAATTCTTGATGTTTCGATGATAA TTTCTTGACTTACCATATATAGAAAGAGAGACTATAAATGACACCTCTTATGTCAATAAG ACGAAATGGATGGATATTAAATGATAGGAAGTGCTATTAAGGGAAACAGAATGAAATAGA GCCACTTTGGGCTTCCCTATGAAATGAGGTATGGAACAGAGCCACTATGAAGAAATTCAT GAGTTGAAATCTAGGAGGTCGAATCCTCCCTTGTTCCTCATGGTACGAGACGAAAACCTC ATGTACAGTTTTGAAACGGAGTTTTTTTTTATTTAATAGAATGAACCACTGTAATGAATG TCGGCTCAATCCAAAGGAAATTATGCGGGAGCTTTGCACAATCTATTTCAAACCATGTTT CTAACATTGGCATCGGCGAGTGGTTTCGATACAGCTCTCTCTGTTCTGCCCTTTTGGGTT GATGGTAGTGATTCATTTTATCAACTATTGAGGTCCCAGTGCCTTGATTATATTTTTAAT GTATGGTTTTTGGGTAACCGCAGTTGACGCACGGGCTTACATCCATTCGGCATGTTAATA AAACGGACGTTGTCACACTCGGTTCATCTTTTGGGTCGCTCTCACAGATCATGAATGGTT CTATGGACGAGCTGGCTCGATGCCCAGGAATCGGTGAGCGGAAGGTAAGGCGGCTCTATG ATACCTTCCATGAGCCGTTCAAACGGGTTCCTGCCCGACCACGACCAAACCTCGTAGTAC CCGATACCCCGGACCGGGAGAAAGCAAAAGGCCAACCTTCGTCTACAGATGGCAGCAGTT TGCAAGATGCGGTAGAGAAGCCAGATGCGTCGAAGAAGACGAAGAAAGGCTCTGATGTAA GATCAGCCCTCACCGTTGCCTTTGCCAAGTATTCGGAGAAGATCCGCAGTCAGGGCCGCG ATGCGCCAAACGAGGCCGGTGAGAGTACTGGCGGCTCGACCGTGGAAGCTGAGAGGGCGG GAGACTAGATTTAGCTGTAGGATGGTTAACGGTGCTGGAGTAATGCTAGTTTGTTCCTTC CTGTTGGGTGCTTGTTGTTGTGACTCGGCCGCCGATTTGCGCGTGCGGCACCAGTATTTC CCGCGGCGTCCTAGGCATGTGTTTTTTTAGGCTAAAGAGGGGCCAGAGAATCTTCAACGA TATCGAAACATTTAAGTGAGATTCC