Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032435_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:226326624:226330260:-1 gene:Zm00001d032435 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily protein
Sequence

ATGGAAGTGTTCTACTACCTCGTGTTCGGCGCGCTCGCCGCCATCGTGGCGGCGCTGGAG
CTCGCCAAGTCCGGCAAGGACCGCGTCGCCACCTCCCCGGCCTTCAACTCATTTAAGAAC
AACTACATCCTCGTTTACTCCCTCATGATGTCTGGGGACTGGCTGCAGGGGCCCTACGTG
TACTACCTCTACAGCCAGTACGGCTTCGACAAGGGCGACATTGGCCGCCTCTTCATCGCC
GGCTTCGGTTCCTCCATGCTCTTCGGCACCATCGTCGGATCCCTCGCGGATAAGCAGGGG
CGGAAGAGGGCGTGTGTCACGTACTGCATCACCTACATCCTCAGCTGCATCACCAAGCAC
TCTCCCCAGTACAAAGTTCTTATGATTGGGCGTGTCCTTGGTGGCATTGCCACTTCGCTG
CTCTTCTCAGCGTTTGAGTCGTGGCTCGTGGCAGAGCACAACAAGAAAGGATTTGATCCA
CAATGGTTGTCGATAACATTCTCCAAGGCTATATTTCTTGGCAATGGTCTAGTGGCCATT
GTTGCTGGCCTATTTGCAAATTTTCTTGCTGATAACATGGGTTTTGGTCCTGTGGCTCCA
TTTGATGCCGCTGCTTGCTTCCTAGCAATAGGAATGGCAATTATCTTATCATCATGGGGT
GAGAACTACGGAGATTCGTCTGACAGCAAGGACTTGATAACCCAGTTCAAGGGTGCAGCT
AAAGCCATTGCTTCAGACGAGAAGATTGCATTGCTTGGAGCCATACAGTCATTGTTTGAG
GGATCAATGTATACTTTCGTTTTCCTGTGGACTCCTGCTCTGAGCCCAAAGGATGAGGAA
ATTCCTCACGGCTTCATATTTGCTACCTTCATGCTTTCCTCGATGCTGGGTAGCTCAATT
GCTTCTCGTTTGTTAGCTAGGAAGCTGAAGGTTGAAGGTTATATGCAAATCGTGTTTTCA
GTATCAGCCTTTACTCTTTTCCTCCCCGTTGTCACCAATTTCCTAGTACCTCCCTCCGGG
GAGAAAGGCGGCAGCATTTCGTTAGGAGGCTGCTTACAGCTTCTTGGTTTCTGTACCTTT
GAGTCATGTGTTGGTATATTTTGGCCATCAATCATGAAGATGAGATCTCAATATATTCCC
GAGGAGGCAAGAAGCACAATCATGAATTTCTTCCGTATACCGCTCAACCTGTTTGTTTGC
GTGGTACTATACAATGTGAATGCATTCCCAATAACTGTCATGTTCGGCATGTGCTCCATT
TTCCTTCTCATGGCAGCAGTCTTGCAGAGGCGCTTAATGGCTGTCTCTGATCTTCACAGA
TCGACAAAGGCTGTAATGATGACTGCGGAAGATGAGCCTCTAAACCCTTAG

Peptide Sequence

PEP ID

Zm00001d032435_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:226326624:226330260:-1 gene:Zm00001d032435 transcript:Zm00001d032435_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily protein
Sequence

MEVFYYLVFGALAAIVAALELAKSGKDRVATSPAFNSFKNNYILVYSLMMSGDWLQGPYV
YYLYSQYGFDKGDIGRLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKH
SPQYKVLMIGRVLGGIATSLLFSAFESWLVAEHNKKGFDPQWLSITFSKAIFLGNGLVAI
VAGLFANFLADNMGFGPVAPFDAAACFLAIGMAIILSSWGENYGDSSDSKDLITQFKGAA
KAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPKDEEIPHGFIFATFMLSSMLGSSI
ASRLLARKLKVEGYMQIVFSVSAFTLFLPVVTNFLVPPSGEKGGSISLGGCLQLLGFCTF
ESCVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNLFVCVVLYNVNAFPITVMFGMCSI
FLLMAAVLQRRLMAVSDLHRSTKAVMMTAEDEPLNP

Transcript Sequence

Transcript ID

Zm00001d032435_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:226326624:226330260:-1 gene:Zm00001d032435 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily protein
Sequence

ACCGGCACCGCAGGCACGGCACACCACGGCCAGACCAGACCACCAGAGTGCCTCCACCCT
CGAGGCCTCCAGTGTCCACTGCCTACTCGCCCCACGCCACCCAAATCCCGTCGGGACGAC
GAAGAAGCCAAGCCGGTGCGCCGTATAAATCTAACCAATCGCCATCCGCCCACCCCCCAA
ATCCCACCACCCTTTTCCCCTTCCAACCCTCGGGATCTCTCCGGCCCGCCATGGAAGTGT
TCTACTACCTCGTGTTCGGCGCGCTCGCCGCCATCGTGGCGGCGCTGGAGCTCGCCAAGT
CCGGCAAGGACCGCGTCGCCACCTCCCCGGCCTTCAACTCATTTAAGAACAACTACATCC
TCGTTTACTCCCTCATGATGTCTGGGGACTGGCTGCAGGGGCCCTACGTGTACTACCTCT
ACAGCCAGTACGGCTTCGACAAGGGCGACATTGGCCGCCTCTTCATCGCCGGCTTCGGTT
CCTCCATGCTCTTCGGCACCATCGTCGGATCCCTCGCGGATAAGCAGGGGCGGAAGAGGG
CGTGTGTCACGTACTGCATCACCTACATCCTCAGCTGCATCACCAAGCACTCTCCCCAGT
ACAAAGTTCTTATGATTGGGCGTGTCCTTGGTGGCATTGCCACTTCGCTGCTCTTCTCAG
CGTTTGAGTCGTGGCTCGTGGCAGAGCACAACAAGAAAGGATTTGATCCACAATGGTTGT
CGATAACATTCTCCAAGGCTATATTTCTTGGCAATGGTCTAGTGGCCATTGTTGCTGGCC
TATTTGCAAATTTTCTTGCTGATAACATGGGTTTTGGTCCTGTGGCTCCATTTGATGCCG
CTGCTTGCTTCCTAGCAATAGGAATGGCAATTATCTTATCATCATGGGGTGAGAACTACG
GAGATTCGTCTGACAGCAAGGACTTGATAACCCAGTTCAAGGGTGCAGCTAAAGCCATTG
CTTCAGACGAGAAGATTGCATTGCTTGGAGCCATACAGTCATTGTTTGAGGGATCAATGT
ATACTTTCGTTTTCCTGTGGACTCCTGCTCTGAGCCCAAAGGATGAGGAAATTCCTCACG
GCTTCATATTTGCTACCTTCATGCTTTCCTCGATGCTGGGTAGCTCAATTGCTTCTCGTT
TGTTAGCTAGGAAGCTGAAGGTTGAAGGTTATATGCAAATCGTGTTTTCAGTATCAGCCT
TTACTCTTTTCCTCCCCGTTGTCACCAATTTCCTAGTACCTCCCTCCGGGGAGAAAGGCG
GCAGCATTTCGTTAGGAGGCTGCTTACAGCTTCTTGGTTTCTGTACCTTTGAGTCATGTG
TTGGTATATTTTGGCCATCAATCATGAAGATGAGATCTCAATATATTCCCGAGGAGGCAA
GAAGCACAATCATGAATTTCTTCCGTATACCGCTCAACCTGTTTGTTTGCGTGGTACTAT
ACAATGTGAATGCATTCCCAATAACTGTCATGTTCGGCATGTGCTCCATTTTCCTTCTCA
TGGCAGCAGTCTTGCAGAGGCGCTTAATGGCTGTCTCTGATCTTCACAGATCGACAAAGG
CTGTAATGATGACTGCGGAAGATGAGCCTCTAAACCCTTAGAGATCATCATAAAAAGGAA
TCGGAAGTTAAAATGGCCCCAATCCTCGACTTATTCCCATGGGGTTGCTGAATAAGATTG
ATATCTAAAAGTTGTAACGACTGTAACAGAACACGGTTTTTACTGTGTTATAGGATTGGT
GCTAGTGCAGTTTCCGGTTGTCATGGTAGAGAACATGATGTGGCTCCTGACTATTGTGCC
ACACACGGCAGAGTATAGCTCGGCATAGCCTCCCCACGTTTTCCCCATGTTTTTCTTCTC
GTGTTTTCTGATAGGATTGATATTTGTATTCAAGTGAAGTATCATATGGAAACCCGCATC
GTCCATTTTGGATGCAAACGCTGAGTAAAGTGAGAAAGGGCTCATTAGAGACCG