Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032274_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:219947690:219952769:-1 gene:Zm00001d032274 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retinol dehydrogenase 13
Sequence

ATGGCGGCAATGACGCGCCACTTCCGCGACTCCTCCACCTCCAGTGACCCCGCTGCCGCC
ACGCCGCCGCTGCCGCCCCCACTCCCCGACCTCGGAGTGGCCCTCTCCGCCGCCGATCTC
CGCGTCACCGCCTACGAGCTTCTCGTTGCCGCTTCACGGGCCACCGGCGCCAAGCCCCTC
ACCTACATTCCTCAGCCCACGACGGCAGCTAGCAAGCTCAAGGGCGCGTTCGGTCTCGGG
TCCTCGCCGCCGTCCAAGGTCGGGAGGGCGGCGGTGCTGGAGCTGGTGCGGGTGCGGATG
GGGGTTACAGAGCAGGCCGACGCTACGATCCGCCGGCTGCTACTCCGCGTCGCCGCCGGA
CAGCTTGGCAGACCTGCAGAATCTATGGTTTTGCCCTTAGAGTTCCTGCAGAAGTGTAAA
GCATCAGATTTTCCTGACCCTCTAGAGTACGAGGCTTGGCAGATGAGGAATTTCAAGCTT
CTTGAGGCTGGTGTGCTGGTCCACCCACTTATTCCTTTAAAGAAATCAGACATTCCTGCA
AAGAGAATGCAGCGAATAATACATAAAGCATATGTTGGGCAAGTTGAAGCTGGGAGGAAT
TCAGAATCCATGCAAATATTGCACAACACTGTCATGTCCCTTGCGTGTAGATCCCTTTGT
GAAACTTCCAATGAGTGTCATTGGGCAGATGGTTTTCCCTTTAATCTCCATATCTACAAA
ATGTTGGTGGAAGCTTGCTTTGATGTTGAGGAAGGCACTGTAGTAGATGAGATTGATGAA
ATGATGGAGCTGTTGAAGAAGACTTGGCCTGTTTTCGGAGTCACTCAAATGCTCCACAAC
CTTTACTTTACCTGGGTTTTGTTCAACCATTTTGTCATTTTGGGCCAAGAAGATAATGGG
TTATTTTCTGCTATAGAGAATCTATTAGTTGAAGTTGCAAAAGATGCTAAAATAACCAAA
GATCCAGATTACTGTGATGTATTGAGCTCCACTTTAATCTCAATAATGGGTTGGGAAGAG
AAAAGACTGCTTGCATACCATGAAACTTTCGGTGGTAGTAATCTTTATTCCATGCAATAT
ACTATTTCAATTGGAATCTCAGCTGCAAAGATTCTCTTTGAAGATGTATCTTATGAATAC
CATAGTGGAACAAACAGAGATATTGATGTTGTGCGCAGCAGGATTGAAACTTATATAAAA
TCATCAATCCGCACTACTTTTGCTCAAAAAATGAAAGAGGCAGGTTCAAATCGGTCATCC
AGAAATCGTACACCTGTTCTGTCTATTCTTGCAAAGAAAACAACTGAGCTTGCTATTAAG
GAGAAAAATGTATACAGTCCAATACTGAAGAAATGGCACCCCTTTGCTGCAGGTGTTGCT
GTTGCAACTCTTCATGGTTGCTTTGGAAATGAGCTAAAAAAGTTTATAGTTGGGCTTACA
GAGCTCACACCAGATACAGCTCAAGTGCTTAAGGCGGCTGACAAGTTAGAAAAGGATCTA
GTTCATATTGCTATTGAAGATTCTATGGACGTTGGTGATAGTGGCAAGTCATTGATTAGT
CAAATGCCACGTTATGAAGCTGGAACTGTAATGGATAATCTGGTAAAATCATGGGCAAAA
GAACAACTTGACAGGCTTAAGATTTGGACTGACCAGAAGCTACAACAGCAGACTTGGAAC
CCAGAGGATAAGGACAAGGATAATTTTGCTCACTCATCTGTGGAGATGCTGCACAGAATT
GAGGAAACTATGGATGCATTTGTACGATTGTCTATACCAATCCGCTCTACTCTGCTTGCT
GATCTGACAGCTGGACTCGATAAATGTCTACATTATTATGTCTCTAATGTGAAATCGGGC
TGCGGAACTCGGAGTAGCCTTTTTCCGCAGCTACCTCATCTGACAAGGTGTGACGTTGGA
TCCAAGTTATTCAAGAAAAACGAGAAACCACAGTTTCTTATGAAGAGAGGATCACAAGTT
GGATCAACAACTGGGAATGAAGCCTCGAGCCTTCGTGGACTATGTTTTCGAATAAATACC
ATTTACTACATCCAAACTGAACTTGAAAACCTGCATATGAAGACGAAAGAATGCTTGCAG
AAAGTTGAGTTATTTCAGCCTGATAATGCTGATGATCTGAACATAAACTTTGGGCTATCC
CAGGCAGCTTGCCAAGAAGGAATTCGACAGCTGTGTGAGACTACTGCATATATGGTGATG
TTCAATGATCTGAGCCACGTTCTCCTGAATACTCTCTATGTTGGGAGCCCTGCGTCAAAC
AGGATCCTGCCTTTGTTAAAAGAGCTTGGTCCTATCCTTAGGATTATATCTGACACAGTG
CACAATGAAGTGCAAAATCGTCTCATAACTGCATTGATGAAAGCCTCTTTTGATGGCTTC
TTGTTGGTGCTTCTTGCTGGTGGACCGACACGTGCTTTCAGCTGCCAGGACTACCAGGTA
ATAGAGGACGATTTCCGAGCCCTAAGAGGCTTATATTTGTCATATTGTGATGGGCTGCCT
GAGGAATTAGTTGGCAAGGCTTCCTCGGAGGTGAAGAACATTCTGCCACTCCTACGGACA
GACACAGAAACCCTCATTGAACGGTTCAAGCAGCTAATTTCTGAATCTTATGAACCTACA
ACCGCATCTAGGTTCCCGATGCCTCCTGTACCTGCTCGTTGGAGTCCGGACAACCCCAAC
ACAATATTGCGTGTATTATGCTATCGAAATGACGAGATAGCTACTAAGTTCCTCAAGAAA
ACATATGATCTGCCAAAGACCCTTTGA

Peptide Sequence

PEP ID

Zm00001d032274_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:219947690:219952769:-1 gene:Zm00001d032274 transcript:Zm00001d032274_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retinol dehydrogenase 13
Sequence

MAAMTRHFRDSSTSSDPAAATPPLPPPLPDLGVALSAADLRVTAYELLVAASRATGAKPL
TYIPQPTTAASKLKGAFGLGSSPPSKVGRAAVLELVRVRMGVTEQADATIRRLLLRVAAG
QLGRPAESMVLPLEFLQKCKASDFPDPLEYEAWQMRNFKLLEAGVLVHPLIPLKKSDIPA
KRMQRIIHKAYVGQVEAGRNSESMQILHNTVMSLACRSLCETSNECHWADGFPFNLHIYK
MLVEACFDVEEGTVVDEIDEMMELLKKTWPVFGVTQMLHNLYFTWVLFNHFVILGQEDNG
LFSAIENLLVEVAKDAKITKDPDYCDVLSSTLISIMGWEEKRLLAYHETFGGSNLYSMQY
TISIGISAAKILFEDVSYEYHSGTNRDIDVVRSRIETYIKSSIRTTFAQKMKEAGSNRSS
RNRTPVLSILAKKTTELAIKEKNVYSPILKKWHPFAAGVAVATLHGCFGNELKKFIVGLT
ELTPDTAQVLKAADKLEKDLVHIAIEDSMDVGDSGKSLISQMPRYEAGTVMDNLVKSWAK
EQLDRLKIWTDQKLQQQTWNPEDKDKDNFAHSSVEMLHRIEETMDAFVRLSIPIRSTLLA
DLTAGLDKCLHYYVSNVKSGCGTRSSLFPQLPHLTRCDVGSKLFKKNEKPQFLMKRGSQV
GSTTGNEASSLRGLCFRINTIYYIQTELENLHMKTKECLQKVELFQPDNADDLNINFGLS
QAACQEGIRQLCETTAYMVMFNDLSHVLLNTLYVGSPASNRILPLLKELGPILRIISDTV
HNEVQNRLITALMKASFDGFLLVLLAGGPTRAFSCQDYQVIEDDFRALRGLYLSYCDGLP
EELVGKASSEVKNILPLLRTDTETLIERFKQLISESYEPTTASRFPMPPVPARWSPDNPN
TILRVLCYRNDEIATKFLKKTYDLPKTL

Transcript Sequence

Transcript ID

Zm00001d032274_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:219947690:219952769:-1 gene:Zm00001d032274 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retinol dehydrogenase 13
Sequence

GACGACGCGGGGGAGCATCGCAGAGAAAAGAGAATGGCGGCAATGACGCGCCACTTCCGC
GACTCCTCCACCTCCAGTGACCCCGCTGCCGCCACGCCGCCGCTGCCGCCCCCACTCCCC
GACCTCGGAGTGGCCCTCTCCGCCGCCGATCTCCGCGTCACCGCCTACGAGCTTCTCGTT
GCCGCTTCACGGGCCACCGGCGCCAAGCCCCTCACCTACATTCCTCAGCCCACGACGGCA
GCTAGCAAGCTCAAGGGCGCGTTCGGTCTCGGGTCCTCGCCGCCGTCCAAGGTCGGGAGG
GCGGCGGTGCTGGAGCTGGTGCGGGTGCGGATGGGGGTTACAGAGCAGGCCGACGCTACG
ATCCGCCGGCTGCTACTCCGCGTCGCCGCCGGACAGCTTGGCAGACCTGCAGAATCTATG
GTTTTGCCCTTAGAGTTCCTGCAGAAGTGTAAAGCATCAGATTTTCCTGACCCTCTAGAG
TACGAGGCTTGGCAGATGAGGAATTTCAAGCTTCTTGAGGCTGGTGTGCTGGTCCACCCA
CTTATTCCTTTAAAGAAATCAGACATTCCTGCAAAGAGAATGCAGCGAATAATACATAAA
GCATATGTTGGGCAAGTTGAAGCTGGGAGGAATTCAGAATCCATGCAAATATTGCACAAC
ACTGTCATGTCCCTTGCGTGTAGATCCCTTTGTGAAACTTCCAATGAGTGTCATTGGGCA
GATGGTTTTCCCTTTAATCTCCATATCTACAAAATGTTGGTGGAAGCTTGCTTTGATGTT
GAGGAAGGCACTGTAGTAGATGAGATTGATGAAATGATGGAGCTGTTGAAGAAGACTTGG
CCTGTTTTCGGAGTCACTCAAATGCTCCACAACCTTTACTTTACCTGGGTTTTGTTCAAC
CATTTTGTCATTTTGGGCCAAGAAGATAATGGGTTATTTTCTGCTATAGAGAATCTATTA
GTTGAAGTTGCAAAAGATGCTAAAATAACCAAAGATCCAGATTACTGTGATGTATTGAGC
TCCACTTTAATCTCAATAATGGGTTGGGAAGAGAAAAGACTGCTTGCATACCATGAAACT
TTCGGTGGTAGTAATCTTTATTCCATGCAATATACTATTTCAATTGGAATCTCAGCTGCA
AAGATTCTCTTTGAAGATGTATCTTATGAATACCATAGTGGAACAAACAGAGATATTGAT
GTTGTGCGCAGCAGGATTGAAACTTATATAAAATCATCAATCCGCACTACTTTTGCTCAA
AAAATGAAAGAGGCAGGTTCAAATCGGTCATCCAGAAATCGTACACCTGTTCTGTCTATT
CTTGCAAAGAAAACAACTGAGCTTGCTATTAAGGAGAAAAATGTATACAGTCCAATACTG
AAGAAATGGCACCCCTTTGCTGCAGGTGTTGCTGTTGCAACTCTTCATGGTTGCTTTGGA
AATGAGCTAAAAAAGTTTATAGTTGGGCTTACAGAGCTCACACCAGATACAGCTCAAGTG
CTTAAGGCGGCTGACAAGTTAGAAAAGGATCTAGTTCATATTGCTATTGAAGATTCTATG
GACGTTGGTGATAGTGGCAAGTCATTGATTAGTCAAATGCCACGTTATGAAGCTGGAACT
GTAATGGATAATCTGGTAAAATCATGGGCAAAAGAACAACTTGACAGGCTTAAGATTTGG
ACTGACCAGAAGCTACAACAGCAGACTTGGAACCCAGAGGATAAGGACAAGGATAATTTT
GCTCACTCATCTGTGGAGATGCTGCACAGAATTGAGGAAACTATGGATGCATTTGTACGA
TTGTCTATACCAATCCGCTCTACTCTGCTTGCTGATCTGACAGCTGGACTCGATAAATGT
CTACATTATTATGTCTCTAATGTGAAATCGGGCTGCGGAACTCGGAGTAGCCTTTTTCCG
CAGCTACCTCATCTGACAAGGTGTGACGTTGGATCCAAGTTATTCAAGAAAAACGAGAAA
CCACAGTTTCTTATGAAGAGAGGATCACAAGTTGGATCAACAACTGGGAATGAAGCCTCG
AGCCTTCGTGGACTATGTTTTCGAATAAATACCATTTACTACATCCAAACTGAACTTGAA
AACCTGCATATGAAGACGAAAGAATGCTTGCAGAAAGTTGAGTTATTTCAGCCTGATAAT
GCTGATGATCTGAACATAAACTTTGGGCTATCCCAGGCAGCTTGCCAAGAAGGAATTCGA
CAGCTGTGTGAGACTACTGCATATATGGTGATGTTCAATGATCTGAGCCACGTTCTCCTG
AATACTCTCTATGTTGGGAGCCCTGCGTCAAACAGGATCCTGCCTTTGTTAAAAGAGCTT
GGTCCTATCCTTAGGATTATATCTGACACAGTGCACAATGAAGTGCAAAATCGTCTCATA
ACTGCATTGATGAAAGCCTCTTTTGATGGCTTCTTGTTGGTGCTTCTTGCTGGTGGACCG
ACACGTGCTTTCAGCTGCCAGGACTACCAGGTAATAGAGGACGATTTCCGAGCCCTAAGA
GGCTTATATTTGTCATATTGTGATGGGCTGCCTGAGGAATTAGTTGGCAAGGCTTCCTCG
GAGGTGAAGAACATTCTGCCACTCCTACGGACAGACACAGAAACCCTCATTGAACGGTTC
AAGCAGCTAATTTCTGAATCTTATGAACCTACAACCGCATCTAGGTTCCCGATGCCTCCT
GTACCTGCTCGTTGGAGTCCGGACAACCCCAACACAATATTGCGTGTATTATGCTATCGA
AATGACGAGATAGCTACTAAGTTCCTCAAGAAAACATATGATCTGCCAAAGACCCTTTGA
TTTCTGCAAATAAATAACTTGCAAACTATTGTGTATAGTGTATTTCTGCAGCTTTGAAAG
TTTATGGTAACTGGTACATTGGATTGTACTGTCTACTTGTGAAGGATAACACAGCATGAA
CATGCAAGTAGAGAACTATTAAGTTTGAATGCAGCAGATTTCATGGATGGAAACAGGAGA
TTTGGCTCTGAGTTTTACACTTTCATCCGATTATTAATGAGCTCTGCTGGCCGTGCCATT
TGTGTGCTTGTGATATGCTCATCTGTGAAGGAGGAACCATACAACAGAATGTAAAGTACC
TGAATATATTGCAATTTTTTATTTACTTGGCTATTATGATTGCCATTGACTGTACAGAGG
AAAACATGGCAGATTTGTATAAGTGAGATACTTCACTTGACTGCTTTCTTGTTCAAATAA
CGTTTCAAAATAAACTGGAA