Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032257_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:219226773:219232499:-1 gene:Zm00001d032257 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aminoaldehyde dehydrogenase 1b

Sequence

ATGATGGCCTCGCAAGCGATGGTACCGCTGCGGCAGCTCTTTGTCGACGGCGAGTGGCGC
CCGCCCGCGCAGGGCCGCCGCCTCCCCGTCGTCAACCCTACCACTGAGGCTCACATCGGC
GAGATCCCGGCGGGCACGGCGGAGGACGTGGACGCCGCGGTGGCGGCGGCGCGCGCGGCG
CTCAAGAGGAACCGCGGCCGCGATTGGGCGCGCGCGCCGGGGGCCGTTCGGGCCAAGTAC
CTCCGCGCCATCGCCGCCAAGGTAATTGAGAGGAAACAAGAGCTAGCTAAGCTAGAGGCA
CTTGATTGTGGGAAGCCTTATGATGAAGCTGCATGGGACATGGATGATGTTGCTGGGTGC
TTTGAGTACTTCGCAGATCAGGCAGAAGCTTTGGACAAAAGACAAAATTCCCCAGTTTCT
CTTCCGATGGAAACTTTTAAATGCCATCTCCGAAGAGAGCCTATTGGGGTAGTTGGGCTG
ATAACTCCTTGGAACTATCCTCTCCTGATGGCTACATGGAAGGTAGCTCCTGCTCTGGCT
GCTGGTTGTGCAGCTGTGCTAAAGCCATCTGAATTGGCTTCTGTGACTTGCTTAGAGCTT
GCTGATATCTGTAAAGAAGTCGGTCTTCCTCCCGGTGTCTTAAACATTGTGACAGGATTA
GGTCCTGATGCTGGTGCTCCTTTGTCAGCACACCCAGATGTTGACAAGGTCGCTTTTACT
GGGAGTTTTGAAACTGGTAAGAAGATTATGGCGGCTGCAGCTCCTATGGTTAAGCCTGTT
ACACTGGAACTTGGTGGAAAAAGTCCTATAGTAGTATTTGATGATGTTGACATTGACAAA
GCTGTTGAGTGGACTCTGTTTGGGTGCTTTTGGACCAATGGTCAGATTTGCAGCGCAACA
TCTCGTCTTCTTGTCCATACAAAAATTGCTAAAGAATTTAATGAGAAGATGGTTGCATGG
GCCAAGAATATTAAGGTTTCTGATCCGCTTGAAGAGGGTTGCAGACTTGGGCCAGTTGTT
AGTGAAGGGCAGTATGAGAAGATTAAAAAGTTCATATTGAATGCCAAAAGCGAAGGTGCT
ACTATTCTGACTGGAGGTGTTAGACCTGCGCATCTTGAGAAGGGGTTCTTTATTGAACCA
ACAATCATTACTGATATCACCACATCAATGGAAATTTGGAGGGAGGAAGTCTTCGGTCCA
GTCCTGTGTGTTAAAGAATTTAGCACTGAAGATGAAGCCATTGAACTGGCCAATGATACA
CAGTATGGTTTAGCTGGTGCTGTAATTTCTGGTGATCGTGAGCGCTGCCAGAGATTATCT
GAGGAGATTGATGCTGGAATTATCTGGGTAAACTGCTCACAGCCCTGCTTCTGCCAGGCT
CCCTGGGGCGGTAACAAGCGTAGTGGATTTGGACGTGAGCTTGGAGAAGGGGGCATTGAT
AACTACCTGAGCGTCAAGCAAGTCACGGAGTACATCTCTGATGAGCCGTGGGGATGGTAT
CGATCCCCCTCCAAGCTGTAA

Peptide Sequence

PEP ID

Zm00001d032257_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:219226773:219232499:-1 gene:Zm00001d032257 transcript:Zm00001d032257_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aminoaldehyde dehydrogenase 1b

Sequence

MMASQAMVPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAA
LKRNRGRDWARAPGAVRAKYLRAIAAKVIERKQELAKLEALDCGKPYDEAAWDMDDVAGC
FEYFADQAEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKVAPALA
AGCAAVLKPSELASVTCLELADICKEVGLPPGVLNIVTGLGPDAGAPLSAHPDVDKVAFT
GSFETGKKIMAAAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSAT
SRLLVHTKIAKEFNEKMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFILNAKSEGA
TILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDT
QYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGID
NYLSVKQVTEYISDEPWGWYRSPSKL

Transcript Sequence

Transcript ID

Zm00001d032257_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:219226773:219232499:-1 gene:Zm00001d032257 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aminoaldehyde dehydrogenase 1b

Sequence

ATAGCCTACACTACACAGGGCCGCAGCTTGCCGATCCCTAGCGACGAAGTCCACTGCCGA
GTTGCCGACTCACCGACTCCCCTCGCAAGTCGCAATCTCCACTCTCCAGAGTCCAAACTC
CACTCCTCACCGATGATGGCCTCGCAAGCGATGGTACCGCTGCGGCAGCTCTTTGTCGAC
GGCGAGTGGCGCCCGCCCGCGCAGGGCCGCCGCCTCCCCGTCGTCAACCCTACCACTGAG
GCTCACATCGGCGAGATCCCGGCGGGCACGGCGGAGGACGTGGACGCCGCGGTGGCGGCG
GCGCGCGCGGCGCTCAAGAGGAACCGCGGCCGCGATTGGGCGCGCGCGCCGGGGGCCGTT
CGGGCCAAGTACCTCCGCGCCATCGCCGCCAAGGTAATTGAGAGGAAACAAGAGCTAGCT
AAGCTAGAGGCACTTGATTGTGGGAAGCCTTATGATGAAGCTGCATGGGACATGGATGAT
GTTGCTGGGTGCTTTGAGTACTTCGCAGATCAGGCAGAAGCTTTGGACAAAAGACAAAAT
TCCCCAGTTTCTCTTCCGATGGAAACTTTTAAATGCCATCTCCGAAGAGAGCCTATTGGG
GTAGTTGGGCTGATAACTCCTTGGAACTATCCTCTCCTGATGGCTACATGGAAGGTAGCT
CCTGCTCTGGCTGCTGGTTGTGCAGCTGTGCTAAAGCCATCTGAATTGGCTTCTGTGACT
TGCTTAGAGCTTGCTGATATCTGTAAAGAAGTCGGTCTTCCTCCCGGTGTCTTAAACATT
GTGACAGGATTAGGTCCTGATGCTGGTGCTCCTTTGTCAGCACACCCAGATGTTGACAAG
GTCGCTTTTACTGGGAGTTTTGAAACTGGTAAGAAGATTATGGCGGCTGCAGCTCCTATG
GTTAAGCCTGTTACACTGGAACTTGGTGGAAAAAGTCCTATAGTAGTATTTGATGATGTT
GACATTGACAAAGCTGTTGAGTGGACTCTGTTTGGGTGCTTTTGGACCAATGGTCAGATT
TGCAGCGCAACATCTCGTCTTCTTGTCCATACAAAAATTGCTAAAGAATTTAATGAGAAG
ATGGTTGCATGGGCCAAGAATATTAAGGTTTCTGATCCGCTTGAAGAGGGTTGCAGACTT
GGGCCAGTTGTTAGTGAAGGGCAGTATGAGAAGATTAAAAAGTTCATATTGAATGCCAAA
AGCGAAGGTGCTACTATTCTGACTGGAGGTGTTAGACCTGCGCATCTTGAGAAGGGGTTC
TTTATTGAACCAACAATCATTACTGATATCACCACATCAATGGAAATTTGGAGGGAGGAA
GTCTTCGGTCCAGTCCTGTGTGTTAAAGAATTTAGCACTGAAGATGAAGCCATTGAACTG
GCCAATGATACACAGTATGGTTTAGCTGGTGCTGTAATTTCTGGTGATCGTGAGCGCTGC
CAGAGATTATCTGAGGAGATTGATGCTGGAATTATCTGGGTAAACTGCTCACAGCCCTGC
TTCTGCCAGGCTCCCTGGGGCGGTAACAAGCGTAGTGGATTTGGACGTGAGCTTGGAGAA
GGGGGCATTGATAACTACCTGAGCGTCAAGCAAGTCACGGAGTACATCTCTGATGAGCCG
TGGGGATGGTATCGATCCCCCTCCAAGCTGTAAACTGGCATGAAATTTTGTTTGTTCCAT
TAGAATAAATATATCTCGATGCTATACAGAACGAACCCGTGTATCAAATGGAGTATGACA
TTGTGAAAAAGGCACATCAGCGGAACAAATGTCAGAGTTGACAATTCCCTCTAATGCAAA
TAGTTAACTCGCCCTTGAG