Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032238_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:1:218359630:218365853:1 gene:Zm00001d032238 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Sequence	ATGGTGAAGCAGAACGACAGCTCACCAATATCCAGGAAGAATGGCCGTTTCAGCCCGGAT TCTCCTGGATATGGTACAAAGGCAAGTTTAGGATCTGATGGTTCGCCGCAACAGATAAAT GGTAGCGTCACTGACAGTGGTGACGGAAGCAAAACTCAGTATCCTGTTGAATTTGGTGCC AATATATGGTGCCCACCACCACCAGAAGATGAGGGCGATGATATCGAATCGAGGTTATTT GGATTCCAGGACGAGGATGATGAGGCTGGGGACTCAAGCGGGCTTCTTGTTTCTGGTAGC TTTAGTGCTAACAAAATAGCTGCTATTGACGAGGTCACAAACACTGCTCAGGAAGAGTGT CTGAAGACTGCGGTGCTCGGCCATTTCCGAGCTCTTGTGGCTCAATTACTGAAGGCAGAA GGCATTGATATGGGAAAGGATGATGGGTCCAAAGGTTGGCTTGATATTGTGTCATCCTTA ACTTGGCAAGCTGCAAGCTATGTGAGGCCAGATACCAAGAAAGGAGGCAGCATGGATCCT ACTGATTATGTGAAGGTCAAATGTATAGCATCAGGGGATCCAAGAGATAGTAATTTTGTT CGAGGAGTTGTTTGCTCCAAGAATGTAAAACACAAGCGCATGGTCTCTGAGCATAGGAAT GCAAAATTGCTCATTTTAGGGGGCGCACTTGAGTACCACAGGGTTCCTAATAAATTGGCA TCTATTGGCAGGATACTTGAACAGGAGAAGGAGCACATGAAAATGATTGTTGGAAAGATT GAGTCCCGGCGACCTAATGTTGTGCTAGTTGAGAAAACTGTCTCATCTTCTGCTCAGGAG CTCTTCTCCAAAGACATTTCGTTAGTTCTGAATGTTAAGAGGACACTTTTGGACAGGGTA TCAAGGTGCACAGGGGCACAAATTGCTTCATCAGCTGACAGTATTGCTTCAGTACGGCTA GGTCAATGTGAAGCGTTCAAGGTGCAAAAAGTTACAGAATTCCCATCAGCTAAACAGACA AATAGGAGATCAAGCAAGACACTGATGTTCTTTGAAGGCTGCCCTTGGCGTTTGGGTTGC ACGGTTCTACTGAGAGGGTCATGTCGGGAGGAGCTCAAGAGGATTAAGCGTGCTGTACAA CTTGCAGTCTTTGCTGCTTATCACCTTTCTCTTGAAACATCATTCTTTGCAGATGAAGGT GCAACACTTCCTAAATTGCCCTCGAGACATGTGGTAGTTGATCCAGATACAAGGAATTGT ACAAATAGCAATTCAGCTGCATTGACCAATGTTGGTATGCCTCATGGACGTAAATCAGAA CATGACAAACTCTCACAGACTGCTATGGTCAACATTATGTTTGAAAATACCCCTGTGTCA CCTAGTTCATTGCCATCGAATGGAGAAGGCCACATGTTTGTGGGTGCATGTCAGCATAAA GAAACTGAATATTCTGTTGATCATAAGAACTCTTGTGAACATTGTGTATCCCGTGCAACT GGTTCATGCAACGGGTATGAAACATCTTTATGTTCATCAGATAATGATTCAATGACACAG AATCAAAATTTGCAGAACTCTGCAAAGCTTACATCAAATGCTCACCAATATGAGTTTCCA GCAAAGGAATGTCAACAAGTAGACCACTGGGATAGACAACCACATGATGATCAATCAGTA GATCAGCGGGACCTGAATAAATTTTCTGGTGAATACTTTCCTGGTTCTGACAATCATCAG AGCATATTAGTTTCGTTGTCCAGTACGTGTATCCCAAAAGGCTTGGTATGCGAGCGCTCC CATCTTTTCCGCATCAAGTTTTATGGTAGCTTTGATAAGCCACTTGGTAGATACCTCCGG GACGACTTATTTGATGAGGCATATCGCTGTCAGTCATGCAAAGAGCCATCAGAATCACAT ATTAGGCGTTATACTCACCAGCATGGTAGCTTAACAATTAGTGTTCGGAGGCTTCAATCT CGAAAGTTGCCTGGTGAGCGTGACGGAAGGATATGGATGTGGCACAGGTGCCTCAAGTGC AAACCTAAGGATGGTGTTCCACCTGCCACACGGAGGATAATCATGTCAGATGCTGCCTGG GGTCTGTCGCTTGGGAAATTCCTAGAGCTAAGTTTCTCAAACCATGCTTCTGCCAACCGA GTTGCAAGCTGTGGACATTCACTCCAGAGGGACTGCCTTCGTTTTTATGGGTATGGAAAC ATGGTGGCATTCTTCAGATATTCTCCTGTTGACATTCTCTCAGTTAACCTTCCTCCACCA GTACTGGACTTCAATTGTTGTAGTACACAAGAGTGGCTAAAAAGGGTGGCAGTTGAGATA TTTGGCAAAATGGAATCCTTGCATGTGGAGGTGTCTGAATTTCTTCACTGTACTGAAAAG AACATTGTAACTGAGGATGAACCTGTGAGGGAATGTGTTCAAAGGCAGATTATCGAGATG AAGGATTGGCTTAAAATGCAAAGAAATGAATATGAGATGTTGCTTTTACCAGTCATGAGG GAAAGCAATCACCCCATGCAGACATCAATTGATATTCTGGAGCTCAACCGCTTGCGGCGT GGTCTTCTTCTTGATGCTTACATTTGGGATCGGAGGCTATGCCATATAGACTCGGTTCTT AATACACATGGCCATATTTCAAAAACCAATCCAGATAATCTTGATATTCTCCTATGCACC AGACTGAAGGAGTGGAAAGCTGATTTGCTTTGTGGGGATACTGAGATTGAAAAATCTTTA GGGAGTCCAAAGAAATCTTTGTTATCCAGAGAGGGCCATTTGAATGATAATGAGTACAGT GTTGCTGATACAAATTTAGAGATTTGTTTGGAGGGTCATCCTGTGGATGATGCAGATGAT CTTGACAAAGTCTACAACAAATTCAGTGGAGTAAAGAAGCGGCCTACTGCTGAACCTACT GATGGCTTGGAACCTGTTGAGAGGTTACCCTCACTTGCATCCATTTTCTCTGATACTATT GATTTGGCATGGACTGGGTCTTGTGATTTGCAGCATGATCTTCCACAAGCTTTCACCAAA ATTGATGAAAATGTATCCTTTAATTTGGACAGTCCGAAGTACAGCAATTTAGTAACCCCT GTTAGAATTCACTCGTTTAGTTCTACGCTGGGGTTGCGGCAGAGAGAACGAACTGGATTA GTTCCAGCTTCTTTGCATCTATCATCATTCAAATCTGCTGAGTACTTCGGAGCTATGAGA AGCATCCTGAAGGACCCAATGCCAAATATGCGAAGGTCCTGTTCTCAAAGGTCTCCTGGG ACGATAGAGAAATTAAATGTTGTTCTTGCACGTAAACCCACATATATCTCATCTACTTCA AATATTATCAATGATGGGGCACGGCTACTGTTACCCCAGACTGGATATGAACATGATGTC GTTGTTGCAGTATACGAGGATGAGCCCACCAGTATTATATCATATGCCATGACATCAGAA GAATATGTAGAACAAGTAACACACAGACTGAATTCCAGTTTGAGTTTTTCTCATCAACCA AATACTAATGGGATTAGCAGCCATGGACTTGAGGCGTCCTCTCCATCTCAAGGAGACCAT TTGCATTCCAAGGGAACTCATTTTAAGTTATCCTTCGATGATGACTCACCGATTTCTCCA GATAAAACAAAGTTCTCTGTGATTTGCTATTTTGCAAAGCATTTTGCTGCGCTGAGAAAG AAATGCTGTCCCAAAGATATTGATTACATACGTTCTCTAAGTCGCTGCAAGAGATGGAAC GCGCAGGGTGGAAAAAGCAATGTTTACTTTGCAAAGACACTGGATGAAAGGTTCATAATC AAACAAGTCACGAGAACAGAGCTGGAGTCTTTTGTAGAGTTTGCTCCTCAGTACTTCAAG TATTTAATGGAATCCTTGGCTTCTGGTAGCCCAACCTGCCTGGCCAAAATAGTAGGGTTA TATCAGGTTGGCGTCAAGAGCTTGAAAACTGGGAAGGAAGTGAGGATGGATCTGATGGTG ATGGAAAATGTTTTCTTTGAAAGGAAGATATCTCGGGTGTATGACCTAAAGGGTTCATTG CGCTCACGCTACACGGCTGGGGACAGCAAAGTCCTCTTGGATGCAAACCTCATAGAGGCA TTGCATACGAAGCCTATATTTTTGGGGAGCAAGGCAAAACGAAGATTGGAAAGAGCTGTC TGGAATGATACTTCATTCCTTGCGTTGGCGGATGTGATGGACTACTCTCTCCTTGTTGGC ATCGACGAGGAGAAGAAAGAGCTCGTCATCGGCATCATCGACTACTTGCGCCAATACACC TGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCGGGCATTCTTGGTGGCCCCAAGAAC GAATCCCCCACCGTCATATCTCCAATGCAGTACAAGAAGAGGTTCAGGAAAGCCATGTCC AAGTACTTCCTCACCGTCCCGGACCAGTGGTCCTCTTGA

Peptide Sequence

PEP ID	Zm00001d032238_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:1:218359630:218365853:1 gene:Zm00001d032238 transcript:Zm00001d032238_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Sequence	MVKQNDSSPISRKNGRFSPDSPGYGTKASLGSDGSPQQINGSVTDSGDGSKTQYPVEFGA NIWCPPPPEDEGDDIESRLFGFQDEDDEAGDSSGLLVSGSFSANKIAAIDEVTNTAQEEC LKTAVLGHFRALVAQLLKAEGIDMGKDDGSKGWLDIVSSLTWQAASYVRPDTKKGGSMDP TDYVKVKCIASGDPRDSNFVRGVVCSKNVKHKRMVSEHRNAKLLILGGALEYHRVPNKLA SIGRILEQEKEHMKMIVGKIESRRPNVVLVEKTVSSSAQELFSKDISLVLNVKRTLLDRV SRCTGAQIASSADSIASVRLGQCEAFKVQKVTEFPSAKQTNRRSSKTLMFFEGCPWRLGC TVLLRGSCREELKRIKRAVQLAVFAAYHLSLETSFFADEGATLPKLPSRHVVVDPDTRNC TNSNSAALTNVGMPHGRKSEHDKLSQTAMVNIMFENTPVSPSSLPSNGEGHMFVGACQHK ETEYSVDHKNSCEHCVSRATGSCNGYETSLCSSDNDSMTQNQNLQNSAKLTSNAHQYEFP AKECQQVDHWDRQPHDDQSVDQRDLNKFSGEYFPGSDNHQSILVSLSSTCIPKGLVCERS HLFRIKFYGSFDKPLGRYLRDDLFDEAYRCQSCKEPSESHIRRYTHQHGSLTISVRRLQS RKLPGERDGRIWMWHRCLKCKPKDGVPPATRRIIMSDAAWGLSLGKFLELSFSNHASANR VASCGHSLQRDCLRFYGYGNMVAFFRYSPVDILSVNLPPPVLDFNCCSTQEWLKRVAVEI FGKMESLHVEVSEFLHCTEKNIVTEDEPVRECVQRQIIEMKDWLKMQRNEYEMLLLPVMR ESNHPMQTSIDILELNRLRRGLLLDAYIWDRRLCHIDSVLNTHGHISKTNPDNLDILLCT RLKEWKADLLCGDTEIEKSLGSPKKSLLSREGHLNDNEYSVADTNLEICLEGHPVDDADD LDKVYNKFSGVKKRPTAEPTDGLEPVERLPSLASIFSDTIDLAWTGSCDLQHDLPQAFTK IDENVSFNLDSPKYSNLVTPVRIHSFSSTLGLRQRERTGLVPASLHLSSFKSAEYFGAMR SILKDPMPNMRRSCSQRSPGTIEKLNVVLARKPTYISSTSNIINDGARLLLPQTGYEHDV VVAVYEDEPTSIISYAMTSEEYVEQVTHRLNSSLSFSHQPNTNGISSHGLEASSPSQGDH LHSKGTHFKLSFDDDSPISPDKTKFSVICYFAKHFAALRKKCCPKDIDYIRSLSRCKRWN AQGGKSNVYFAKTLDERFIIKQVTRTELESFVEFAPQYFKYLMESLASGSPTCLAKIVGL YQVGVKSLKTGKEVRMDLMVMENVFFERKISRVYDLKGSLRSRYTAGDSKVLLDANLIEA LHTKPIFLGSKAKRRLERAVWNDTSFLALADVMDYSLLVGIDEEKKELVIGIIDYLRQYT WDKQLETWVKASGILGGPKNESPTVISPMQYKKRFRKAMSKYFLTVPDQWSS

Transcript Sequence

Transcript ID	Zm00001d032238_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:218359630:218365853:1 gene:Zm00001d032238 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Sequence	CAGGCGAGCAGATGATGAGGATGATGATGAGCCCGGGGTTCAGTTTTTCACCCATGGGAA TGACTTCTTACATGACTTCTCAGATACAGAATCTGTTAGTGTTAGTACCCCTAATGATAT CAACCGCTCCCTGACCCCAAGCCCCTTGGAGAGCCCGACTTGGATGGTGAAGCAGAACGA CAGCTCACCAATATCCAGGAAGAATGGCCGTTTCAGCCCGGATTCTCCTGGATATGGTAC AAAGGCAAGTTTAGGATCTGATGGTTCGCCGCAACAGATAAATGGTAGCGTCACTGACAG TGGTGACGGAAGCAAAACTCAGTATCCTGTTGAATTTGGTGCCAATATATGGTGCCCACC ACCACCAGAAGATGAGGGCGATGATATCGAATCGAGGTTATTTGGATTCCAGGACGAGGA TGATGAGGCTGGGGACTCAAGCGGGCTTCTTGTTTCTGGTAGCTTTAGTGCTAACAAAAT AGCTGCTATTGACGAGGTCACAAACACTGCTCAGGAAGAGTGTCTGAAGACTGCGGTGCT CGGCCATTTCCGAGCTCTTGTGGCTCAATTACTGAAGGCAGAAGGCATTGATATGGGAAA GGATGATGGGTCCAAAGGTTGGCTTGATATTGTGTCATCCTTAACTTGGCAAGCTGCAAG CTATGTGAGGCCAGATACCAAGAAAGGAGGCAGCATGGATCCTACTGATTATGTGAAGGT CAAATGTATAGCATCAGGGGATCCAAGAGATAGTAATTTTGTTCGAGGAGTTGTTTGCTC CAAGAATGTAAAACACAAGCGCATGGTCTCTGAGCATAGGAATGCAAAATTGCTCATTTT AGGGGGCGCACTTGAGTACCACAGGGTTCCTAATAAATTGGCATCTATTGGCAGGATACT TGAACAGGAGAAGGAGCACATGAAAATGATTGTTGGAAAGATTGAGTCCCGGCGACCTAA TGTTGTGCTAGTTGAGAAAACTGTCTCATCTTCTGCTCAGGAGCTCTTCTCCAAAGACAT TTCGTTAGTTCTGAATGTTAAGAGGACACTTTTGGACAGGGTATCAAGGTGCACAGGGGC ACAAATTGCTTCATCAGCTGACAGTATTGCTTCAGTACGGCTAGGTCAATGTGAAGCGTT CAAGGTGCAAAAAGTTACAGAATTCCCATCAGCTAAACAGACAAATAGGAGATCAAGCAA GACACTGATGTTCTTTGAAGGCTGCCCTTGGCGTTTGGGTTGCACGGTTCTACTGAGAGG GTCATGTCGGGAGGAGCTCAAGAGGATTAAGCGTGCTGTACAACTTGCAGTCTTTGCTGC TTATCACCTTTCTCTTGAAACATCATTCTTTGCAGATGAAGGTGCAACACTTCCTAAATT GCCCTCGAGACATGTGGTAGTTGATCCAGATACAAGGAATTGTACAAATAGCAATTCAGC TGCATTGACCAATGTTGGTATGCCTCATGGACGTAAATCAGAACATGACAAACTCTCACA GACTGCTATGGTCAACATTATGTTTGAAAATACCCCTGTGTCACCTAGTTCATTGCCATC GAATGGAGAAGGCCACATGTTTGTGGGTGCATGTCAGCATAAAGAAACTGAATATTCTGT TGATCATAAGAACTCTTGTGAACATTGTGTATCCCGTGCAACTGGTTCATGCAACGGGTA TGAAACATCTTTATGTTCATCAGATAATGATTCAATGACACAGAATCAAAATTTGCAGAA CTCTGCAAAGCTTACATCAAATGCTCACCAATATGAGTTTCCAGCAAAGGAATGTCAACA AGTAGACCACTGGGATAGACAACCACATGATGATCAATCAGTAGATCAGCGGGACCTGAA TAAATTTTCTGGTGAATACTTTCCTGGTTCTGACAATCATCAGAGCATATTAGTTTCGTT GTCCAGTACGTGTATCCCAAAAGGCTTGGTATGCGAGCGCTCCCATCTTTTCCGCATCAA GTTTTATGGTAGCTTTGATAAGCCACTTGGTAGATACCTCCGGGACGACTTATTTGATGA GGCATATCGCTGTCAGTCATGCAAAGAGCCATCAGAATCACATATTAGGCGTTATACTCA CCAGCATGGTAGCTTAACAATTAGTGTTCGGAGGCTTCAATCTCGAAAGTTGCCTGGTGA GCGTGACGGAAGGATATGGATGTGGCACAGGTGCCTCAAGTGCAAACCTAAGGATGGTGT TCCACCTGCCACACGGAGGATAATCATGTCAGATGCTGCCTGGGGTCTGTCGCTTGGGAA ATTCCTAGAGCTAAGTTTCTCAAACCATGCTTCTGCCAACCGAGTTGCAAGCTGTGGACA TTCACTCCAGAGGGACTGCCTTCGTTTTTATGGGTATGGAAACATGGTGGCATTCTTCAG ATATTCTCCTGTTGACATTCTCTCAGTTAACCTTCCTCCACCAGTACTGGACTTCAATTG TTGTAGTACACAAGAGTGGCTAAAAAGGGTGGCAGTTGAGATATTTGGCAAAATGGAATC CTTGCATGTGGAGGTGTCTGAATTTCTTCACTGTACTGAAAAGAACATTGTAACTGAGGA TGAACCTGTGAGGGAATGTGTTCAAAGGCAGATTATCGAGATGAAGGATTGGCTTAAAAT GCAAAGAAATGAATATGAGATGTTGCTTTTACCAGTCATGAGGGAAAGCAATCACCCCAT GCAGACATCAATTGATATTCTGGAGCTCAACCGCTTGCGGCGTGGTCTTCTTCTTGATGC TTACATTTGGGATCGGAGGCTATGCCATATAGACTCGGTTCTTAATACACATGGCCATAT TTCAAAAACCAATCCAGATAATCTTGATATTCTCCTATGCACCAGACTGAAGGAGTGGAA AGCTGATTTGCTTTGTGGGGATACTGAGATTGAAAAATCTTTAGGGAGTCCAAAGAAATC TTTGTTATCCAGAGAGGGCCATTTGAATGATAATGAGTACAGTGTTGCTGATACAAATTT AGAGATTTGTTTGGAGGGTCATCCTGTGGATGATGCAGATGATCTTGACAAAGTCTACAA CAAATTCAGTGGAGTAAAGAAGCGGCCTACTGCTGAACCTACTGATGGCTTGGAACCTGT TGAGAGGTTACCCTCACTTGCATCCATTTTCTCTGATACTATTGATTTGGCATGGACTGG GTCTTGTGATTTGCAGCATGATCTTCCACAAGCTTTCACCAAAATTGATGAAAATGTATC CTTTAATTTGGACAGTCCGAAGTACAGCAATTTAGTAACCCCTGTTAGAATTCACTCGTT TAGTTCTACGCTGGGGTTGCGGCAGAGAGAACGAACTGGATTAGTTCCAGCTTCTTTGCA TCTATCATCATTCAAATCTGCTGAGTACTTCGGAGCTATGAGAAGCATCCTGAAGGACCC AATGCCAAATATGCGAAGGTCCTGTTCTCAAAGGTCTCCTGGGACGATAGAGAAATTAAA TGTTGTTCTTGCACGTAAACCCACATATATCTCATCTACTTCAAATATTATCAATGATGG GGCACGGCTACTGTTACCCCAGACTGGATATGAACATGATGTCGTTGTTGCAGTATACGA GGATGAGCCCACCAGTATTATATCATATGCCATGACATCAGAAGAATATGTAGAACAAGT AACACACAGACTGAATTCCAGTTTGAGTTTTTCTCATCAACCAAATACTAATGGGATTAG CAGCCATGGACTTGAGGCGTCCTCTCCATCTCAAGGAGACCATTTGCATTCCAAGGGAAC TCATTTTAAGTTATCCTTCGATGATGACTCACCGATTTCTCCAGATAAAACAAAGTTCTC TGTGATTTGCTATTTTGCAAAGCATTTTGCTGCGCTGAGAAAGAAATGCTGTCCCAAAGA TATTGATTACATACGTTCTCTAAGTCGCTGCAAGAGATGGAACGCGCAGGGTGGAAAAAG CAATGTTTACTTTGCAAAGACACTGGATGAAAGGTTCATAATCAAACAAGTCACGAGAAC AGAGCTGGAGTCTTTTGTAGAGTTTGCTCCTCAGTACTTCAAGTATTTAATGGAATCCTT GGCTTCTGGTAGCCCAACCTGCCTGGCCAAAATAGTAGGGTTATATCAGGTTGGCGTCAA GAGCTTGAAAACTGGGAAGGAAGTGAGGATGGATCTGATGGTGATGGAAAATGTTTTCTT TGAAAGGAAGATATCTCGGGTGTATGACCTAAAGGGTTCATTGCGCTCACGCTACACGGC TGGGGACAGCAAAGTCCTCTTGGATGCAAACCTCATAGAGGCATTGCATACGAAGCCTAT ATTTTTGGGGAGCAAGGCAAAACGAAGATTGGAAAGAGCTGTCTGGAATGATACTTCATT CCTTGCGTTGGCGGATGTGATGGACTACTCTCTCCTTGTTGGCATCGACGAGGAGAAGAA AGAGCTCGTCATCGGCATCATCGACTACTTGCGCCAATACACCTGGGACAAGCAGCTGGA GACGTGGGTGAAGGCCTCGGGCATTCTTGGTGGCCCCAAGAACGAATCCCCCACCGTCAT ATCTCCAATGCAGTACAAGAAGAGGTTCAGGAAAGCCATGTCCAAGTACTTCCTCACCGT CCCGGACCAGTGGTCCTCTTGACGGCCTGGCTAGCTAACAAGAATTGTCCGCCTTAACCA GAAGCGTTTGCCGTGCCATGCCATGCCATGCCATAGTACATGTCCGTCATTCTTTCTGTG CCTAGACCCTAGAGAGAGAGAGAGAGAGAGAGAGAGGTAGTCAAATTCATTTTGTGTCCG CCTGTACCATCTGTAGCAGCCATAGATAGGGGATCATCCTCCGACTGGGGATGCTGGATG CCAAGCATATGGTCACTGCAGTGTCCAGCCACAGATAGAGAGGCTTGGTCCATGACTCCC ATCTCCATGTACATTACGGCCAGCATATAATATGTCTGAGGAGAAAAAAAAAGGAAATCT GTC