Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032215_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:217379952:217386795:1 gene:Zm00001d032215 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease adapter protein CLPS1 chloroplastic
Sequence

ATGCCTCCAAACCGCACGTCGAACGGCCCACGGAGCATCACCACCGCGGCAGCTGAGCTC
GGCCCCAACATTCAGATTCTTCGAGGCGCGGCGACGGCGGTCGGCGACATGGAGGCCGCG
GTGCCCAGCCGTGTTGCGCTCTCCGCGGCGAGCCGCCTCCCAAATCCCCACGCCGTGACA
GGAGATAGATCTTTCATTTACAAGGGAAGATGCCAAAGTCTTGCAATTCCTATGGCTTTG
TCAGCAGCTGCGCCAGGCAAAGGTGGTGGTGTGCTTGATCGGCCAGTTGAGAAAACTACT
CCTGGTCGCCAGTCTGAATTTGATGTGAAGAAATCCCGGAAAATGTCGCCTCCATACCGT
GTCATCCTGCACAATGACAACTACAACAGGCGCGAGTACGTTGTCAAGGTCCTGATGAAA
GTGATCCCTGGGATGACCGTCGACAACGCTGTGAACATCATGCAGGAGGCGCACGTGAAT
GGGCTGTCAGTGGTGATTGTCTGTTCCCAGTCCGAGGCTGAGGAGCACTGCACGTCGCTC
AGGGGCAACGGCCTCCGGAGCTCGATCGAGCCCGCGAGTGGTGGCTGCTGA

Peptide Sequence

PEP ID

Zm00001d032215_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:217379952:217386795:1 gene:Zm00001d032215 transcript:Zm00001d032215_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease adapter protein CLPS1 chloroplastic
Sequence

MPPNRTSNGPRSITTAAAELGPNIQILRGAATAVGDMEAAVPSRVALSAASRLPNPHAVT
GDRSFIYKGRCQSLAIPMALSAAAPGKGGGVLDRPVEKTTPGRQSEFDVKKSRKMSPPYR
VILHNDNYNRREYVVKVLMKVIPGMTVDNAVNIMQEAHVNGLSVVIVCSQSEAEEHCTSL
RGNGLRSSIEPASGGC

Transcript Sequence

Transcript ID

Zm00001d032215_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:217379952:217386795:1 gene:Zm00001d032215 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease adapter protein CLPS1 chloroplastic
Sequence

AAATTACCGGGCCACAAATAATCCGATGCCTCCAAACCGCACGTCGAACGGCCCACGGAG
CATCACCACCGCGGCAGCTGAGCTCGGCCCCAACATTCAGATTCTTCGAGGCGCGGCGAC
GGCGGTCGGCGACATGGAGGCCGCGGTGCCCAGCCGTGTTGCGCTCTCCGCGGCGAGCCG
CCTCCCAAATCCCCACGCCGTGACAGGAGATAGATCTTTCATTTACAAGGGAAGATGCCA
AAGTCTTGCAATTCCTATGGCTTTGTCAGCAGCTGCGCCAGGCAAAGGTGGTGGTGTGCT
TGATCGGCCAGTTGAGAAAACTACTCCTGGTCGCCAGTCTGAATTTGATGTGAAGAAATC
CCGGAAAATGTCGCCTCCATACCGTGTCATCCTGCACAATGACAACTACAACAGGCGCGA
GTACGTTGTCAAGGTCCTGATGAAAGTGATCCCTGGGATGACCGTCGACAACGCTGTGAA
CATCATGCAGGAGGCGCACGTGAATGGGCTGTCAGTGGTGATTGTCTGTTCCCAGTCCGA
GGCTGAGGAGCACTGCACGTCGCTCAGGGGCAACGGCCTCCGGAGCTCGATCGAGCCCGC
GAGTGGTGGCTGCTGAGGTTCGAGACTTGGGGGTATACCTTCTTGTTTTGCCAGCGTATA
GTTTGTAAATACCCAGCGTATCAAGCTAAAGCTGAAACGGATTGGTTATATGCACTTATC
GATACAACGAAGCTGAGTACCCCTCTCGGGTAGGTGTAAATCGTGCAAGGGTACCCTGTA
GAAGAAGAAACATAGTATTTTCGGTTTTGATTTATAAAATATTTAGTTGCACATGCCTAC
TCTGTTTATAGAAATTGCTTCTACTGCTTTTTAACAGAAGGCTAAGGACTTGTTTGGAAG
AGCTTCATTT