Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032208_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:217172556:217174224:-1 gene:Zm00001d032208 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAAGGGGGCAAGAGCAGCGGGCGATGGAGCTCGTCCTGCCGCCGGGCTTCCGCTTC
TTCCCGACGGACGAAGAGCTCCTCACCTGCTACCTCGCCAGGAAGGCCATGGACGGCAGC
TTCACCACGGCAGCCATCCGCGAGGTGGACCTCTACAAGACAGAGCCATGGGACCTGCCA
TGCGAGCAGCAGGCGGCGGCGGCCGGAGGAGACCTGCACGAGGGCTACTTCTTCTGCACC
AGGGGCAGCAAGTCCCCGTCCGGCATTCGTGCCCGCCGCGCCACACAGCTGGGCTACTGG
AAGTCCACGGGGAAGGACAAGCCCGTGCACAGCAGGTCTGGCCGCCTCGTCGTCGGGACG
AGGAAGACGCTAGTGTTCTACCGTGGCAGGGCCCCCAGAGGGGAGAAGACTGACTGGGTG
ATGCACGAGTACTCCATGGGCGAGAGGAGGAGCAGCGCCCTCCTCAGAGGAGCACAGAGT
GAGTGGGTCATTTGCAGGGTGTTCACGAGGAAGCAGCATCCAGTGATCAGCAACGACAGG
AAACTACCGGAAATGGAGGAGGCTGCCGTGCATGGGCATGGCCACCGCTCTCCTGGCCAT
CTCCTTGCCACGGAGGCAGCAGACGACGGTTTCGACAGCGAGCAGGAATCGGCGCCACCG
GTCGTCGTCACCGAGACCCAGCATACATCAGGAAGCCACATCGGCGGTGCCCAAGCCATG
GAGGGCGACGACGACCATTATCAGCACCGTCAAATAGCCCATGAGGAGCTACTGACGACG
ATGCACCATCACCACGGTTCCAGTCGCGTCGTCTCGCCAGCATGTTGGCTCAACCAGCAT
GACGACCGGCTGGGATCGCATTATTATTGCCCCGCGTTGCCAGTCATGCAGTCCGACGAT
GCGGATTACTATCTACCAGAGTTGCTGGAGTACAGCGGTCCGCTGGACACCGGCGGTGAG
GAGGACTGCCGTCTCCGTGCTGAGACTCAGTTCACCGCCGTGGGCTCCTCCGATCACATC
GACGACGGGCTCTACTGGGACATTGGCTTTTGA

Peptide Sequence

PEP ID

Zm00001d032208_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:217172556:217174224:-1 gene:Zm00001d032208 transcript:Zm00001d032208_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQRGQEQRAMELVLPPGFRFFPTDEELLTCYLARKAMDGSFTTAAIREVDLYKTEPWDLP
CEQQAAAAGGDLHEGYFFCTRGSKSPSGIRARRATQLGYWKSTGKDKPVHSRSGRLVVGT
RKTLVFYRGRAPRGEKTDWVMHEYSMGERRSSALLRGAQSEWVICRVFTRKQHPVISNDR
KLPEMEEAAVHGHGHRSPGHLLATEAADDGFDSEQESAPPVVVTETQHTSGSHIGGAQAM
EGDDDHYQHRQIAHEELLTTMHHHHGSSRVVSPACWLNQHDDRLGSHYYCPALPVMQSDD
ADYYLPELLEYSGPLDTGGEEDCRLRAETQFTAVGSSDHIDDGLYWDIGF

Transcript Sequence

Transcript ID

Zm00001d032208_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:217172556:217174224:-1 gene:Zm00001d032208 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTGCTGGTCAGCATCGGATCGAGGGCATATATACAGGATGCAAAGGGGGCAAGAGCAG
CGGGCGATGGAGCTCGTCCTGCCGCCGGGCTTCCGCTTCTTCCCGACGGACGAAGAGCTC
CTCACCTGCTACCTCGCCAGGAAGGCCATGGACGGCAGCTTCACCACGGCAGCCATCCGC
GAGGTGGACCTCTACAAGACAGAGCCATGGGACCTGCCATGCGAGCAGCAGGCGGCGGCG
GCCGGAGGAGACCTGCACGAGGGCTACTTCTTCTGCACCAGGGGCAGCAAGTCCCCGTCC
GGCATTCGTGCCCGCCGCGCCACACAGCTGGGCTACTGGAAGTCCACGGGGAAGGACAAG
CCCGTGCACAGCAGGTCTGGCCGCCTCGTCGTCGGGACGAGGAAGACGCTAGTGTTCTAC
CGTGGCAGGGCCCCCAGAGGGGAGAAGACTGACTGGGTGATGCACGAGTACTCCATGGGC
GAGAGGAGGAGCAGCGCCCTCCTCAGAGGAGCACAGAGTGAGTGGGTCATTTGCAGGGTG
TTCACGAGGAAGCAGCATCCAGTGATCAGCAACGACAGGAAACTACCGGAAATGGAGGAG
GCTGCCGTGCATGGGCATGGCCACCGCTCTCCTGGCCATCTCCTTGCCACGGAGGCAGCA
GACGACGGTTTCGACAGCGAGCAGGAATCGGCGCCACCGGTCGTCGTCACCGAGACCCAG
CATACATCAGGAAGCCACATCGGCGGTGCCCAAGCCATGGAGGGCGACGACGACCATTAT
CAGCACCGTCAAATAGCCCATGAGGAGCTACTGACGACGATGCACCATCACCACGGTTCC
AGTCGCGTCGTCTCGCCAGCATGTTGGCTCAACCAGCATGACGACCGGCTGGGATCGCAT
TATTATTGCCCCGCGTTGCCAGTCATGCAGTCCGACGATGCGGATTACTATCTACCAGAG
TTGCTGGAGTACAGCGGTCCGCTGGACACCGGCGGTGAGGAGGACTGCCGTCTCCGTGCT
GAGACTCAGTTCACCGCCGTGGGCTCCTCCGATCACATCGACGACGGGCTCTACTGGGAC
ATTGGCTTTTGAAAAGCAAGTTTATCCTTTGGATGTTTGCGACCTGATCACCTGCATATG
TGTATATCCCTAGATAGATAGATCAAATTGTGAATGGGGTTAATGTAATTATATGACTCA
ACTTCTGACGCACGTGCATTTAATTAAGTTTCCAATCATT