Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032156_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:1:214672633:214676306:1 gene:Zm00001d032156 gene_biotype:protein_coding transcript_biotype:protein_coding description:Omega-6 fatty acid desaturase chloroplastic
Sequence

ATGTCCAGGTTGATAGAAGATACTGCATGGCAACCTGTTTGGCAAAAGGAAATTGAATCA
TCACCTTTTCTAAGGAAGGCAATTATTTTTGGCTATGGCCCTATCAGGCCATGGATGTCT
ATTGCTCACTGGTTGATTTGGCACTTTGATCTAAAAAAATTCAGACCAAATGAAGTTCCA
AGGGTTAAGATAAGCTTAGCATGTGTGTTTGCATTCATGGCGATTGGATGGCCCTTGATC
ATTCTCAAATCAGGACTAGCTGGATGGTTTAAGTTCTGGTTCATGCCATGGATGGTTTAT
CATTTTTGGATGAGCACTTTTACAATGGTACATCACACAGCTCCTCATATACCATTCAAG
TCATCTGAAGAATGGAATGCTGCACAAGCTCAATTAAACGGCACAGTTCATTGTAACTAT
CCTCAATGGATAGAGATCCTTTGCCATGACATAAATGTGCATGTCCCACACCATATTTCT
CCAAGAATTCCAAGCTATAACCTTCGTGCTGCTTATGATTCCATCAAACAGAACTGGGGC
AAGTATGTCAATGAAGCCAACTGGAATTGGCGATTGATGAAGACGATACTGACGAGATGC
CATGTGTACGACAAGGAGAGATACTATGTTCCGTTCGATGAGCTCGCGCCTCAGGAGTCC
CAACCAATCAAATTCCTTAGGAAGTTCATGCCAGATTACGCATGA

Peptide Sequence

PEP ID

Zm00001d032156_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:1:214672633:214676306:1 gene:Zm00001d032156 transcript:Zm00001d032156_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Omega-6 fatty acid desaturase chloroplastic
Sequence

MSRLIEDTAWQPVWQKEIESSPFLRKAIIFGYGPIRPWMSIAHWLIWHFDLKKFRPNEVP
RVKISLACVFAFMAIGWPLIILKSGLAGWFKFWFMPWMVYHFWMSTFTMVHHTAPHIPFK
SSEEWNAAQAQLNGTVHCNYPQWIEILCHDINVHVPHHISPRIPSYNLRAAYDSIKQNWG
KYVNEANWNWRLMKTILTRCHVYDKERYYVPFDELAPQESQPIKFLRKFMPDYA

Transcript Sequence

Transcript ID

Zm00001d032156_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:214672633:214676306:1 gene:Zm00001d032156 gene_biotype:protein_coding transcript_biotype:protein_coding description:Omega-6 fatty acid desaturase chloroplastic
Sequence

GGCTTGGACAGGCACAGCAGTGACTGGGGTTAGCTCTGTCCCTTGTTCTATAAACTCTTG
TGGATTTGCCTGCACGGGCTCATGTTTTTATCTGTGTAGCACTGTAGCTTCATTCACACT
CTATATCATTTTTTTGTAAAGTTTTTTGTGATAGGTCATGATTGTGCTCACAAATCATTT
TCAAGGAATAAGTTGGTTGAAGATGTTGTTGGAACCTTGGCTTTCATGCCATTGATATAT
CCTTATGAACCGTGGAGATTTAAGCATGACCGACATCATGCCAAGACAAACATGTATGTA
CATAACTCCTTGTGCATCAACCTCTAATGTTTTTTAGACTCCAAAAATGCACTTCGAGGC
CCAAGTAGTATTAATTTCTACTACTCTTCCAGAAGTTTTGCTTTCATGCATTGCATTGCA
ATGAGAATTTACCCCATTGTGCACTTATTCACACGGCATCTTCTTGTCTGTTCTAGTTTT
AGTACTGTCCTTGACATGGATTTAACTTTGTTTTTCAGTTTTCAAACTTCCACTGAATAT
TTTATATTGCTTTCGATTCAGCTAATTCTAGGGAATGACAGCTGAGCAACATAATAGTTA
AAATTTACATTTCTGATTTAGCATATGTAATACTTATACTTGCTTTCTAATATTCACTGA
GCACAGATAACAGATATACTGCATGTTCTTTAATCATAGTATAACTTTATAAATTTTTTG
TGCCCCATTTGGATCCTTTGAATTAAAATTCATTCTAATAATTGTAATTTAGACATAGAT
CAAATAAGCTAATATGATTGTATGCGGAATATATCTGTATATTATTATTGACCATATGAG
GGAGATAGTTATGTCTTTATATATTGCATTTCTATGGTAAGGGGGTGAGACGACTATAGA
ATCAGTGTTCATCTCCTTTCTCCTACCCTATGAATTTAAGATAGGCTTATATCTGAACTT
TAGAAAGTTTTGAAATGTCAAATTCCAAGGCGTATAACCTACTCCATTAAGTAGATTCCA
ATTTCTCCAAAATGAAAGGATCAAAACAATCACTTTGGGTATTTGTATAAACTTTCAATA
TAGATGAAGTCATAACCTGAAAGGCCTTGAATACTTTCAAATGCCAACCATGTCCTAATA
TGCATTTGGAACATTTACCATTTGTGCAATGTCCAGGTTGATAGAAGATACTGCATGGCA
ACCTGTTTGGCAAAAGGAAATTGAATCATCACCTTTTCTAAGGAAGGCAATTATTTTTGG
CTATGGCCCTATCAGGCCATGGATGTCTATTGCTCACTGGTTGATTTGGCACTTTGATCT
AAAAAAATTCAGACCAAATGAAGTTCCAAGGGTTAAGATAAGCTTAGCATGTGTGTTTGC
ATTCATGGCGATTGGATGGCCCTTGATCATTCTCAAATCAGGACTAGCTGGATGGTTTAA
GTTCTGGTTCATGCCATGGATGGTTTATCATTTTTGGATGAGCACTTTTACAATGGTACA
TCACACAGCTCCTCATATACCATTCAAGTCATCTGAAGAATGGAATGCTGCACAAGCTCA
ATTAAACGGCACAGTTCATTGTAACTATCCTCAATGGATAGAGATCCTTTGCCATGACAT
AAATGTGCATGTCCCACACCATATTTCTCCAAGAATTCCAAGCTATAACCTTCGTGCTGC
TTATGATTCCATCAAACAGAACTGGGGCAAGTATGTCAATGAAGCCAACTGGAATTGGCG
ATTGATGAAGACGATACTGACGAGATGCCATGTGTACGACAAGGAGAGATACTATGTTCC
GTTCGATGAGCTCGCGCCTCAGGAGTCCCAACCAATCAAATTCCTTAGGAAGTTCATGCC
AGATTACGCATGATGCCATCATCACAGCTGTTGACTAGTTGAGATTATTCAGTATTGTCG
GCACAGGTGGACAGTCACATTTTCAGTGATTACGCATGTCCCAAAATTTTGACTGGAATA
CTCCATGTTACACTATTATTCGTGCAGTAGGAAAGCACGTAGCGTACCAAAATATTTATA
CTTCAGGAAATAGACAAAGACATTGGTGATG