Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032116_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:1:213639210:213644930:-1 gene:Zm00001d032116 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat receptor-like protein kinase PEPR1
Sequence	ATGCTTCTACTAGTGCTACTAGTGAAAACTAGAGCAACGCCTGCCGGTCTCTGTTTCGCA GGATCCTCCCGCCCTGCGTGCACAGAGTTGCTGTCTCTGGAGGGGGAAAAAGGGATCTTC TGCTCACTTCTATACCAAATTTTCGGGGACAAGATGAAGCTGGTTTTATGGCATCAGTTT TTTCTCTTCTTCGTGTTAGTTTCAACATCACAGGGTATGAGTTCAGATGGCCTAGCTCTT CTTGCTCTGTCCAAAAGCCTCATACTACCAAGTCCCATAAGAACCAACTGGAGTGATTCT GATGCAACTCCCTGTACATGGAGCGGTGTTGGTTGCAATGGAAGGAACAGAGTCATCTCT CTCGACCTATCATCGTCAGGTGTTTCGGGTTCTATAGGACCTGCAATAGGGCGTCTGAAA TACCTGCGGATTCTCATCTTATCAGCTAACAACATATCTGGTTTGATCCCTCTAGAATTG GGAGACTGCAATATGCTTGAAGAACTGGATTTGTCCCAAAACCTGTTTTCTGGCAATATA CCAGCATCATTGGGCAACCTCAAGAAATTGTCATCACTGTCACTGTACCGCAACTCCTTC AATGGAACAATACCAGAGGAGTTGTTCAAGAACCAGTTTCTGGAGCAAGTGTACCTACAT GACAATCAGCTCAGTGGTTCGGTGCCCTTATCGGTTGGTGAAATGACAAGCCTTAAGTCA CTGTGGTTACAGGAAAATATGTTGTCTGGAGTTTTGCCCAGTTCAATTGGAAACTGCACC AAGTTGGAGGATCTGTATCTACTCGATAATCAACTGAGTGGCAGTATTCCTGAAACCTTG GGTATGATCAAAGGTCTCAAGGTTTTTGATGCTACTACCAATAGTTTCACAGGTGAGATC TCTTTCAGTTTTGAGGACTGCAAGCTAGAAATATTCATCTTGTCTTTCAATAATATAAAA GGTGAAATTCCATCATGGCTGGGGAACTGCATGAGCTTGCAACAACTTGGATTTGTCAAT AATAGTTTGTATGGCAAAATTCCAAATTCTCTTGGCTTATTGAGCAACCTCACATATCTT TTACTTTCACAGAACTCCCTTTCTGGGCCGATCCCACCTGAGATTGGTAACTGTCAGTCG CTGCAGTGGCTAGAGTTAGATGCAAACCAGCTGGATGGCACTGTTCCTGAAGAATTTGCA AATTTACGGAGTTTGTCAAAGCTCTTTCTTTTTGAGAATCGCCTCATGGGAGACTTCCCT GAGAATATTTGGAGTATCCAAACCCTCGAGAGTGTCCTACTTTATAGCAACAGATTCACA GGGAAGCTACCTTCAGTGTTAGCTGAGCTGAAGTTCCTAAAGAACATCACACTGTTTGAT AATTTCTTCACTGGAGTCATACCACAGGAGCTAGGTGTTAATAGCCCCTTGGTCCAGATA GATTTCACAAACAACAGTTTTGTTGGTAGTATCCCACCAAACATCTGTTCAAGAAAAGCA TTGAGAATTTTGGACTTAGGGTTTAATCATCTCAACGGTAGCATCCCATCCAGTGTTGTG GACTGCCCAAGTTTGAAGCGAGTCATTTTACAAAACAATAACCTTAACGGGTCTATTCCA CAATTTGTAAACTGTGCAAATCTAAGTTATATGGACCTAAGCCACAATTCCTTGAGTGGT AACATTCCAGCAAGCTTCAGCAGATGTGTAAACATTACTGAGATAAACTGGTCAGAGAAC AAGCTTTTTGGAGCAATACCACCTGAAATTGGAAACTTAGTGAATCTGAAAAGACTTGAC CTCTCACACAACATATTGCATGGTTCGATCCCTGTGCAAATTTCCAGTTGCTCCAAGTTG TACTCACTTGATTTGAGTTTTAACTCATTGAATGGTTCGGCCCTCCGCACCGTAAGCAAC TTGAAGTTTCTGACACAGCTACGATTGCAAGAGAATAGATTCAGCGGAGGCTTGCCTGAT TCTCTCTCACAATTGGAAATGCTTATTGAGCTGCAACTTGGTGGAAATATTCTTGGGGGT AGTATCCCTTCGTCATTAGGACAGCTGGTGAAACTGGGCACAGCCTTGAACCTTAGTAGC AATGGCCTAATGGGTGACATTCCAACACAATTGGGTAATTTGGTGGAGTTGCAAAACTTA GATTTTTCATTTAATAATCTCACAGGAGGCCTTGCTACATTGAGAAGTCTAGGCTTTTTG CAGGCCTTGAATGTTTCTTACAACCAATTTAGTGGACCAGTCCCAGATAATCTTCTGAAG TTTCTGAGTTCCACACCATATTCTTTTGATGGAAACCCAGGCCTCTGTATCTCCTGCAGC ACCAGTGGCTCTTCTTGCATGGGAGCTAATGTTTTGAAACCTTGTGGTGGGTCGAAGAAA AGAGGAGTACATGGCCAATTGAAAATTGTTCTCATAGTTCTCGGTTCATTATTTGTGGGA GGAGTTCTTGTACTTGTACTGTGTTGCATCCTTCTGAAATCTCGAGATTGGAAGAAAAAT AAAGTCAGTAACATGTTTGAAGGTTCCTCATCTAAATTAAATGAGGTTACAGAGGCCACT GAAAATTTCGATGACAAGTATATCATCGGTACAGGTGCTCACGGAACTGTTTACAAGGCA ACACTGAGGTCAGGGGATGTTTATGCTATAAAGAAGCTTGCGATTTCTGCACACAAAGGT TCATACAAAAGCATGGTTAGAGAACTGAAGACACTGGGTGAAATTAAGCACAGAAACTTG ATAAAGCTGAAAGAATTTTGGTTGAGAAGTGATAATGGATTCATACTGTATGATTTTATG GAAAAGGGCAGCCTCCATGATATTCTGCATGTAATTCAGCCAGCACCAGCTTTGGACTGG TGTGTGAGGTATGACATAGCTCTTGGCACCGCCCATGGGTTAGCATATCTTCATGATGAC TGCCGCCCTGCGATCATTCACCGTGATATTAAACCAAGAAATATACTGCTCGACAAGGAC ATGGTGCCACATATTTCAGATTTTGGCATTGCAAAGCACATGGACCAGTCTTCTACTACT GCTCCACAGACCACTGGAATCGTTGGCACTATTGGATATATGGCCCCAGAATTGGCGTTT TCCACCAAGAGCAGCATGGAGTCTGACGTGTACAGCTACGGTGTGGTGCTACTGGAGCTG TTGACCAGGAGGACGGCGGTGGATCCTTTGTTCCCCGACAGCGCGGACATAGTCGGCTGG GTGTCGTCCGTGCTGGACGGCACCGACAAAATCGAGGCCGTCTGTGACCCGGCCCTCATG GAGGAAGTCTTCGGCACGGTGGAGATGGAGGAGGTGCGTAAGGTCCTGTCGGTGGCGCTC CGGTGCGCGGCCAGGGAGGTGAGCCAAAGGCCCTCCATGACTGCCGTCGTGAAGGAGCTG ACGGATGCGCGGCCAGCCTCTGCCAGCAGCGGCAGCCGGTCGTTGTCCAAGTCGAGGGAA GGGAAACCGGGATTGCAATCCAGCAGCAGCGCGTACTGGCAGTAG

Peptide Sequence

PEP ID	Zm00001d032116_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:1:213639210:213644930:-1 gene:Zm00001d032116 transcript:Zm00001d032116_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat receptor-like protein kinase PEPR1
Sequence	MLLLVLLVKTRATPAGLCFAGSSRPACTELLSLEGEKGIFCSLLYQIFGDKMKLVLWHQF FLFFVLVSTSQGMSSDGLALLALSKSLILPSPIRTNWSDSDATPCTWSGVGCNGRNRVIS LDLSSSGVSGSIGPAIGRLKYLRILILSANNISGLIPLELGDCNMLEELDLSQNLFSGNI PASLGNLKKLSSLSLYRNSFNGTIPEELFKNQFLEQVYLHDNQLSGSVPLSVGEMTSLKS LWLQENMLSGVLPSSIGNCTKLEDLYLLDNQLSGSIPETLGMIKGLKVFDATTNSFTGEI SFSFEDCKLEIFILSFNNIKGEIPSWLGNCMSLQQLGFVNNSLYGKIPNSLGLLSNLTYL LLSQNSLSGPIPPEIGNCQSLQWLELDANQLDGTVPEEFANLRSLSKLFLFENRLMGDFP ENIWSIQTLESVLLYSNRFTGKLPSVLAELKFLKNITLFDNFFTGVIPQELGVNSPLVQI DFTNNSFVGSIPPNICSRKALRILDLGFNHLNGSIPSSVVDCPSLKRVILQNNNLNGSIP QFVNCANLSYMDLSHNSLSGNIPASFSRCVNITEINWSENKLFGAIPPEIGNLVNLKRLD LSHNILHGSIPVQISSCSKLYSLDLSFNSLNGSALRTVSNLKFLTQLRLQENRFSGGLPD SLSQLEMLIELQLGGNILGGSIPSSLGQLVKLGTALNLSSNGLMGDIPTQLGNLVELQNL DFSFNNLTGGLATLRSLGFLQALNVSYNQFSGPVPDNLLKFLSSTPYSFDGNPGLCISCS TSGSSCMGANVLKPCGGSKKRGVHGQLKIVLIVLGSLFVGGVLVLVLCCILLKSRDWKKN KVSNMFEGSSSKLNEVTEATENFDDKYIIGTGAHGTVYKATLRSGDVYAIKKLAISAHKG SYKSMVRELKTLGEIKHRNLIKLKEFWLRSDNGFILYDFMEKGSLHDILHVIQPAPALDW CVRYDIALGTAHGLAYLHDDCRPAIIHRDIKPRNILLDKDMVPHISDFGIAKHMDQSSTT APQTTGIVGTIGYMAPELAFSTKSSMESDVYSYGVVLLELLTRRTAVDPLFPDSADIVGW VSSVLDGTDKIEAVCDPALMEEVFGTVEMEEVRKVLSVALRCAAREVSQRPSMTAVVKEL TDARPASASSGSRSLSKSREGKPGLQSSSSAYWQ

Transcript Sequence

Transcript ID	Zm00001d032116_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:213639210:213644930:-1 gene:Zm00001d032116 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat receptor-like protein kinase PEPR1
Sequence	GTGCCTGCGCCAACAGTCCGCCGCGCTGCCGGTGCTCTCTCATTCTCGTCCGCCATGGAT GCTTCTACTAGTGCTACTAGTGAAAACTAGAGCAACGCCTGCCGGTCTCTGTTTCGCAGG ATCCTCCCGCCCTGCGTGCACAGAGTTGCTGTCTCTGGAGGGGGAAAAAGGGATCTTCTG CTCACTTCTATACCAAATTTTCGGGGACAAGATGAAGCTGGTTTTATGGCATCAGTTTTT TCTCTTCTTCGTGTTAGTTTCAACATCACAGGGTATGAGTTCAGATGGCCTAGCTCTTCT TGCTCTGTCCAAAAGCCTCATACTACCAAGTCCCATAAGAACCAACTGGAGTGATTCTGA TGCAACTCCCTGTACATGGAGCGGTGTTGGTTGCAATGGAAGGAACAGAGTCATCTCTCT CGACCTATCATCGTCAGGTGTTTCGGGTTCTATAGGACCTGCAATAGGGCGTCTGAAATA CCTGCGGATTCTCATCTTATCAGCTAACAACATATCTGGTTTGATCCCTCTAGAATTGGG AGACTGCAATATGCTTGAAGAACTGGATTTGTCCCAAAACCTGTTTTCTGGCAATATACC AGCATCATTGGGCAACCTCAAGAAATTGTCATCACTGTCACTGTACCGCAACTCCTTCAA TGGAACAATACCAGAGGAGTTGTTCAAGAACCAGTTTCTGGAGCAAGTGTACCTACATGA CAATCAGCTCAGTGGTTCGGTGCCCTTATCGGTTGGTGAAATGACAAGCCTTAAGTCACT GTGGTTACAGGAAAATATGTTGTCTGGAGTTTTGCCCAGTTCAATTGGAAACTGCACCAA GTTGGAGGATCTGTATCTACTCGATAATCAACTGAGTGGCAGTATTCCTGAAACCTTGGG TATGATCAAAGGTCTCAAGGTTTTTGATGCTACTACCAATAGTTTCACAGGTGAGATCTC TTTCAGTTTTGAGGACTGCAAGCTAGAAATATTCATCTTGTCTTTCAATAATATAAAAGG TGAAATTCCATCATGGCTGGGGAACTGCATGAGCTTGCAACAACTTGGATTTGTCAATAA TAGTTTGTATGGCAAAATTCCAAATTCTCTTGGCTTATTGAGCAACCTCACATATCTTTT ACTTTCACAGAACTCCCTTTCTGGGCCGATCCCACCTGAGATTGGTAACTGTCAGTCGCT GCAGTGGCTAGAGTTAGATGCAAACCAGCTGGATGGCACTGTTCCTGAAGAATTTGCAAA TTTACGGAGTTTGTCAAAGCTCTTTCTTTTTGAGAATCGCCTCATGGGAGACTTCCCTGA GAATATTTGGAGTATCCAAACCCTCGAGAGTGTCCTACTTTATAGCAACAGATTCACAGG GAAGCTACCTTCAGTGTTAGCTGAGCTGAAGTTCCTAAAGAACATCACACTGTTTGATAA TTTCTTCACTGGAGTCATACCACAGGAGCTAGGTGTTAATAGCCCCTTGGTCCAGATAGA TTTCACAAACAACAGTTTTGTTGGTAGTATCCCACCAAACATCTGTTCAAGAAAAGCATT GAGAATTTTGGACTTAGGGTTTAATCATCTCAACGGTAGCATCCCATCCAGTGTTGTGGA CTGCCCAAGTTTGAAGCGAGTCATTTTACAAAACAATAACCTTAACGGGTCTATTCCACA ATTTGTAAACTGTGCAAATCTAAGTTATATGGACCTAAGCCACAATTCCTTGAGTGGTAA CATTCCAGCAAGCTTCAGCAGATGTGTAAACATTACTGAGATAAACTGGTCAGAGAACAA GCTTTTTGGAGCAATACCACCTGAAATTGGAAACTTAGTGAATCTGAAAAGACTTGACCT CTCACACAACATATTGCATGGTTCGATCCCTGTGCAAATTTCCAGTTGCTCCAAGTTGTA CTCACTTGATTTGAGTTTTAACTCATTGAATGGTTCGGCCCTCCGCACCGTAAGCAACTT GAAGTTTCTGACACAGCTACGATTGCAAGAGAATAGATTCAGCGGAGGCTTGCCTGATTC TCTCTCACAATTGGAAATGCTTATTGAGCTGCAACTTGGTGGAAATATTCTTGGGGGTAG TATCCCTTCGTCATTAGGACAGCTGGTGAAACTGGGCACAGCCTTGAACCTTAGTAGCAA TGGCCTAATGGGTGACATTCCAACACAATTGGGTAATTTGGTGGAGTTGCAAAACTTAGA TTTTTCATTTAATAATCTCACAGGAGGCCTTGCTACATTGAGAAGTCTAGGCTTTTTGCA GGCCTTGAATGTTTCTTACAACCAATTTAGTGGACCAGTCCCAGATAATCTTCTGAAGTT TCTGAGTTCCACACCATATTCTTTTGATGGAAACCCAGGCCTCTGTATCTCCTGCAGCAC CAGTGGCTCTTCTTGCATGGGAGCTAATGTTTTGAAACCTTGTGGTGGGTCGAAGAAAAG AGGAGTACATGGCCAATTGAAAATTGTTCTCATAGTTCTCGGTTCATTATTTGTGGGAGG AGTTCTTGTACTTGTACTGTGTTGCATCCTTCTGAAATCTCGAGATTGGAAGAAAAATAA AGTCAGTAACATGTTTGAAGGTTCCTCATCTAAATTAAATGAGGTTACAGAGGCCACTGA AAATTTCGATGACAAGTATATCATCGGTACAGGTGCTCACGGAACTGTTTACAAGGCAAC ACTGAGGTCAGGGGATGTTTATGCTATAAAGAAGCTTGCGATTTCTGCACACAAAGGTTC ATACAAAAGCATGGTTAGAGAACTGAAGACACTGGGTGAAATTAAGCACAGAAACTTGAT AAAGCTGAAAGAATTTTGGTTGAGAAGTGATAATGGATTCATACTGTATGATTTTATGGA AAAGGGCAGCCTCCATGATATTCTGCATGTAATTCAGCCAGCACCAGCTTTGGACTGGTG TGTGAGGTATGACATAGCTCTTGGCACCGCCCATGGGTTAGCATATCTTCATGATGACTG CCGCCCTGCGATCATTCACCGTGATATTAAACCAAGAAATATACTGCTCGACAAGGACAT GGTGCCACATATTTCAGATTTTGGCATTGCAAAGCACATGGACCAGTCTTCTACTACTGC TCCACAGACCACTGGAATCGTTGGCACTATTGGATATATGGCCCCAGAATTGGCGTTTTC CACCAAGAGCAGCATGGAGTCTGACGTGTACAGCTACGGTGTGGTGCTACTGGAGCTGTT GACCAGGAGGACGGCGGTGGATCCTTTGTTCCCCGACAGCGCGGACATAGTCGGCTGGGT GTCGTCCGTGCTGGACGGCACCGACAAAATCGAGGCCGTCTGTGACCCGGCCCTCATGGA GGAAGTCTTCGGCACGGTGGAGATGGAGGAGGTGCGTAAGGTCCTGTCGGTGGCGCTCCG GTGCGCGGCCAGGGAGGTGAGCCAAAGGCCCTCCATGACTGCCGTCGTGAAGGAGCTGAC GGATGCGCGGCCAGCCTCTGCCAGCAGCGGCAGCCGGTCGTTGTCCAAGTCGAGGGAAGG GAAACCGGGATTGCAATCCAGCAGCAGCGCGTACTGGCAGTAGGATTTCTGAATTTTATT CTGCGGAGCTGTTACGGCCTCCGGGACACCAACTTCCTCTCTTGTACCTCCTGATTGGTT AGTTGACAAAGATTAACTGACATAATTTGTTACCCACTAACATTGTAGAGCAGGTACAAG TATTGTGAATTGATGCATTTCACTTAGAAGACCCGACGTGGCAAGAGACTCTTCATTTTT TACTCTTTATTTGACTATCTATTTACGTTTTTATAAAGATTACACTCTATATATAGCATC TCAGTATTGTGAATGGGGGCAGGCCTTTTCTCAGGTAGCGGTCCTGTTATAATTCCGAAA GACGTTGTTAATACTCCGAGCAAGAGGAGCAAGAGGCGTGAAGATTCGGTAAATGAGGAC TCTCTTGAGAGGGCAAAAAGGTTAACAGCAATCAGGAATCTTGATAGTACAGGTAACTTT CCTATTAATTCAATTTTGTCTTTATCGGATGATTATGTTTTTGATAACTGTGCTAGTCTA GGAATCTCTTTAGGGCATACAAAAAGTGAAGTTCAATTATCTATAAAATCAATCATGTCC TTAGAAAGAAATAGATTCATAGAGCATAGTTCTAAACCTTGTCATGATAGCCATGTCGAT ATTGATTGTGGAGTATCAGAAGATGAAAGTTTGATTCTTGACACGCTTAGGGATTTTGCT GGATCCTTAGCAGAAAGGGATATAGAGGGTGTAGACAGTGAGGACACCCCTTTTGAAAAA GTGGTTCCTAGGAG