Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032114_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:213509196:213513117:1 gene:Zm00001d032114 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-3-phosphoglycerate dehydrogenase 2 chloroplastic
Sequence	ATGTCCCCCGCGGAGCTCCTCGCCAAGGCGGCGCAGTTCGACGCGCTCATCGTGCGCAGC GGCACCAAGGTGACGCGGGAGGTGCTGGAGGCCGGGCAGGGCCGGCTGCGGGTGGTGGGC CGCGCGGGCGTCGGGATCGACAACGTCGACCTCCAGGCCGCCACCGAGGTCGGGTGCCTC GTCGTCAACGCGCCCACCGCCAACACTATCGCCGCGGCCGAGCACGGCATCGCGCTGCTC GCCTCCATGGCGCGCAACGTCTCGCAGGCGGACGCGGCGCTCAAGGCCGGTAAATGGCAA AGGAACAAGTACGTGGGGGTTTCTCTGGTGGGAAAGACCCTGGCCGTCATGGGCTTCGGG AAGGTTGGGTCAGAGGTAGCGAGGCGAGCGAAAGGGCTTGGGATGCACGTGATAGCTCAT GATCCCTACGCCCCTGCCGACCGGGCCCGGGCCCTCGGGGTAGAGCTGGTTTCTTTCGAC GAGGCCATCGCAAGAGCCGACTTCATCTCCCTCCACATGCCGCTGATACCGACGACGTCC AAGATCTTCAACGACGAGTCCTTTGCAAAGATGAAGACTGGTGTCCGGATCATCAACGTG GCTAGGGGTGGAGTGATCGACGAAGACGCTCTGGTCAGGGCGCTTGACTCCGGCAAAGTT GCTCAGGCGGCTCTTGATGTCTTCACCGTGGAGCCCCCGCCCAAGGACAGCAAGCTGGTG TTGCATGAGAATGTCACTGTAACACCCCACCTTGGAGCTAGTACTGTCGAGGCTCAGGAA GGCGTCGCTATCGAGATTGCGGAAGCCGTGGTTGGTGCGCTGAGAGGGGAGCTCGCAGCA ACCGCTGTGAATGCGCCCATGGTCCCAGCTGAGATCCTGTCAGAGCTGGCTCCATACGTT TCTCTGGCCGAGAAGCTCGGGAGGCTGGCGGTGCAGCTCGTGGCCGGCGAGAGCGGCATC AAGGGCGTGAAGGTGGTGTACACCACAGCGCGTGGCCCCGACGACCTGGACACTCGGCTC CTCCGCGCGATGGTGACCAAGGGCCTGGTGGAGCCGGTGTCCAGCACGTTCGTGAACCTG GTGAACGCGGACTACACGGCCAAGCAGCGCGGCCTCCGCCTCACGGAGGAGCGCGTGGCG CACGACAGCCCCGCGGCGGAGGCGCCGCTGGAGTCCGTCCAGGTTCGCCTCTCGCACGTG CAGTCCAAGTTCGCGGGTGCCATCAGCGACGGCGGGGACGACATCGTCCTGGAGGGCCGG GTCAAGTACGGCGTGCCTCACCTCACCCTCGTGGGGCCCTACGAGGTGGACGTCAGCCTG GAGGGCAACCTGATCCTGTGCCGCCAGATCGACCAGCCCGGGATGATCGGCAAGGTCGGC AACATACTCGGCGACACGAACGTGAACATCAACTTCATGAGCGTCGGACGGACGTTCAGG GGCAAGCAGGCGATCATGGCCATTGGCGTTGACGAGGAGCCCGACAAGGACACGCTGGAG AAGATCGGGGCCATCCCGGCGATCGAGGAGTTCGTTTTCCTCGAACTATGA

Peptide Sequence

PEP ID	Zm00001d032114_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:213509196:213513117:1 gene:Zm00001d032114 transcript:Zm00001d032114_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-3-phosphoglycerate dehydrogenase 2 chloroplastic
Sequence	MSPAELLAKAAQFDALIVRSGTKVTREVLEAGQGRLRVVGRAGVGIDNVDLQAATEVGCL VVNAPTANTIAAAEHGIALLASMARNVSQADAALKAGKWQRNKYVGVSLVGKTLAVMGFG KVGSEVARRAKGLGMHVIAHDPYAPADRARALGVELVSFDEAIARADFISLHMPLIPTTS KIFNDESFAKMKTGVRIINVARGGVIDEDALVRALDSGKVAQAALDVFTVEPPPKDSKLV LHENVTVTPHLGASTVEAQEGVAIEIAEAVVGALRGELAATAVNAPMVPAEILSELAPYV SLAEKLGRLAVQLVAGESGIKGVKVVYTTARGPDDLDTRLLRAMVTKGLVEPVSSTFVNL VNADYTAKQRGLRLTEERVAHDSPAAEAPLESVQVRLSHVQSKFAGAISDGGDDIVLEGR VKYGVPHLTLVGPYEVDVSLEGNLILCRQIDQPGMIGKVGNILGDTNVNINFMSVGRTFR GKQAIMAIGVDEEPDKDTLEKIGAIPAIEEFVFLEL

Transcript Sequence

Transcript ID	Zm00001d032114_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:213509196:213513117:1 gene:Zm00001d032114 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-3-phosphoglycerate dehydrogenase 2 chloroplastic
Sequence	GGTCGCCGAGAAGCTGAGCGAGGCCGGGCTGGCCGTGCTGCGGCAGTTCGCGGACGTGGA GTGCGCCTACGGCATGTCCCCCGCGGAGCTCCTCGCCAAGGCGGCGCAGTTCGACGCGCT CATCGTGCGCAGCGGCACCAAGGTGACGCGGGAGGTGCTGGAGGCCGGGCAGGGCCGGCT GCGGGTGGTGGGCCGCGCGGGCGTCGGGATCGACAACGTCGACCTCCAGGCCGCCACCGA GGTCGGGTGCCTCGTCGTCAACGCGCCCACCGCCAACACTATCGCCGCGGCCGAGCACGG CATCGCGCTGCTCGCCTCCATGGCGCGCAACGTCTCGCAGGCGGACGCGGCGCTCAAGGC CGGTAAATGGCAAAGGAACAAGTACGTGGGGGTTTCTCTGGTGGGAAAGACCCTGGCCGT CATGGGCTTCGGGAAGGTTGGGTCAGAGGTAGCGAGGCGAGCGAAAGGGCTTGGGATGCA CGTGATAGCTCATGATCCCTACGCCCCTGCCGACCGGGCCCGGGCCCTCGGGGTAGAGCT GGTTTCTTTCGACGAGGCCATCGCAAGAGCCGACTTCATCTCCCTCCACATGCCGCTGAT ACCGACGACGTCCAAGATCTTCAACGACGAGTCCTTTGCAAAGATGAAGACTGGTGTCCG GATCATCAACGTGGCTAGGGGTGGAGTGATCGACGAAGACGCTCTGGTCAGGGCGCTTGA CTCCGGCAAAGTTGCTCAGGCGGCTCTTGATGTCTTCACCGTGGAGCCCCCGCCCAAGGA CAGCAAGCTGGTGTTGCATGAGAATGTCACTGTAACACCCCACCTTGGAGCTAGTACTGT CGAGGCTCAGGAAGGCGTCGCTATCGAGATTGCGGAAGCCGTGGTTGGTGCGCTGAGAGG GGAGCTCGCAGCAACCGCTGTGAATGCGCCCATGGTCCCAGCTGAGATCCTGTCAGAGCT GGCTCCATACGTTTCTCTGGCCGAGAAGCTCGGGAGGCTGGCGGTGCAGCTCGTGGCCGG CGAGAGCGGCATCAAGGGCGTGAAGGTGGTGTACACCACAGCGCGTGGCCCCGACGACCT GGACACTCGGCTCCTCCGCGCGATGGTGACCAAGGGCCTGGTGGAGCCGGTGTCCAGCAC GTTCGTGAACCTGGTGAACGCGGACTACACGGCCAAGCAGCGCGGCCTCCGCCTCACGGA GGAGCGCGTGGCGCACGACAGCCCCGCGGCGGAGGCGCCGCTGGAGTCCGTCCAGGTTCG CCTCTCGCACGTGCAGTCCAAGTTCGCGGGTGCCATCAGCGACGGCGGGGACGACATCGT CCTGGAGGGCCGGGTCAAGTACGGCGTGCCTCACCTCACCCTCGTGGGGCCCTACGAGGT GGACGTCAGCCTGGAGGGCAACCTGATCCTGTGCCGCCAGATCGACCAGCCCGGGATGAT CGGCAAGGTCGGCAACATACTCGGCGACACGAACGTGAACATCAACTTCATGAGCGTCGG ACGGACGTTCAGGGGCAAGCAGGCGATCATGGCCATTGGCGTTGACGAGGAGCCCGACAA GGACACGCTGGAGAAGATCGGGGCCATCCCGGCGATCGAGGAGTTCGTTTTCCTCGAACT ATGATGGCTAGCAGCGAGTTTTCTCTAGGATTGATATTTGTTATAGTACGTACTGAACTG GGGTTTGACGTCTCATGTCATGGCCACAGGGAGGAACCTGATCCGCTCTGGTCTGTCTGT CTGTCTGTCTGTTTGGTGACCTCTACATTTTTTATGCGGGGAGAAGGAAGCAATATATAT TGTAAAAGGTGGGTGCCTTGGCTTGCCCCCCTGCCTAAATAAGAGGTGTGTGCCGTTTGT T