Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032109_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:1:213251636:213254892:1 gene:Zm00001d032109 gene_biotype:protein_coding transcript_biotype:protein_coding description:dentin sialophosphoprotein-related
Sequence

ATGACTTCTGCTTCTCTTCCACAAACTCATTTTTTGGAGCAGGAAAATAAAAGAACAGAT
AGCAAAAGCCATGAATCTAGATTGGAAGTGCATGCTGCACCTAAAAGCTTAATTAGTTCT
CAAAGAACAAATCAGATTGAAGCTACTCCAGCATTTGCAAGTTGGGATGCTGATTTTCAG
TCTGCTAGTTCAGAAAATGCTGCCAAAAACTCCAAGCAACCTGATCTATTTAAGAGCACT
TCTGTGGCCGAGTCTTTTAGTTTCCCAGCTTCAGAGATTGCCATCAAACCTGTAGTAAGT
ACTGAAAGTAAAACAAATACGAGAAGTGCCATCCTAGAACATCACTCAGAAGTTTTGGCT
TCAGCAAGTAGCACATTATTTGGTGATGACCTTTCTGATCAAAAGGTTGTCCACCATATC
TTTGAGAGCAGCAACGCTCCTGGGTTCACTGAATCCTCTCTCCCCATGGATTTTGCTAAA
AGTGATCAGTTACATGGAAGGGACGATGATGGATTCAATGATGATGAAGCTTTTGATGAA
TGGCAAGAATTTACAACAAGTGGCAATCAAGGCAGCCTATCAAATGCGGAACATATTGAG
GAACCTTTAAAGAGAGATTTGTCTGAGAATGATGTAATAGATCCCTTGCGAGTAGGCAGC
AAGGAATCACCCAACAATGTTATTGAAAAATCCTCTAATGAATGGCAAGGTTTTGCTTCT
GTGTCTGGTCAAGGAAGAGATTTTGTGACATCTGTGGAACGATCAACAAGTGACCACAGA
CTAAATTTGGTGGGACCAGTTGGAGATGAAGAGACAATGAGCAGCATCTCACACCAACAT
TCTTCAGAAATTAATCCTGTTGATGTATGGCATGTGGGCAATGTGAAGGCTCAAAATACT
GCAGAAATGGTTAAGGAAAAAAATGATTCTTTTGACGATTGGCAAGATTCTACTACCACC
GGTCAAGTCCAGGACACTTCGTTGAATCAAACTGGGGACATGATGGAGGTCTCAAAAGCC
AGTCACAAAGAAACAGACATGGACTCATGGTTCATTGGACATTCTAGGGAGCCAGCAAAT
ACGGGTACCATGAATGCAAATAACATGTTGGACGATTGGCAAGGTTTCACTGGTTCAGAT
CAAGCACAGCAAAATTCATCTAGCACTGGTGCAGAAATGATAAGTGTGCCATTTGAGCAG
CATGGTGGAACTGTTTCTGCCCCATCATGGGCAAATGGCAGCAGTAATGATGCCGCAAAA
ACATCCTCAACAAGTATAGAAAGCGACCCATTTGATGTTTGGCAAAATTTTACTAAATCA
GGTCACCTGCAAGAAAATATGTCTAGTCTTGGGAGAGAACCGAGTAGTCTGTCGCCTGAA
CCAGCTAAAGGAAATGATTCCTTGGATTTGTGGATTACCAGCAACTTCAAGGAATCTAAA
AGCAATGATGTTGGGAGAACTAATGCCTCATCTGATGGATGGCAGGATTTTGCCAGTTTT
GATCAAGCTCAGAGAATTACTAAAGTTCATGTGGAAGGACATGTTGTAAAAGATCCTTCA
GGGGCTGAAACTTTGGACTTATGGGCCTCAAGTCATGTTAATGAAAAGAACCTTGAACAG
ATAAGTGAACATAATGATCTATTCGATGACTGGCAGGATTTCCAAAACTCCAATCCACAG
CAAACAACCTTACAAGTTTCTTCAGATGCTTCATTATTTGATATAACCTTGGCATCAAGG
CCTGATGCTTTTGGAGAGCAGGAAATTGGGAGTGTTTTGCAGGTAGCTTCATCCGAAAAC
TCAAAGGATAAAAAGGAGGGTTCTAATGAATCAAAAGCATTTCCATCTGATGACCACTTG
AAAAGCACAAGTGGAATGCAGCAGATGGGTGATGTTGATTCGCTGTCTTCATTATGGCCA
GCTAATAAACCAGAGCCTGCAAATACAAATGTGGAACAGTTGCTTGCTCAGATGCACGAT
CTGTCCTTTATGCTCAAGGATGAACTTTCTGTCCCTGATAAACCCATCGATCATTCAAAA
CCCTGA

Peptide Sequence

PEP ID

Zm00001d032109_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:1:213251636:213254892:1 gene:Zm00001d032109 transcript:Zm00001d032109_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:dentin sialophosphoprotein-related
Sequence

MTSASLPQTHFLEQENKRTDSKSHESRLEVHAAPKSLISSQRTNQIEATPAFASWDADFQ
SASSENAAKNSKQPDLFKSTSVAESFSFPASEIAIKPVVSTESKTNTRSAILEHHSEVLA
SASSTLFGDDLSDQKVVHHIFESSNAPGFTESSLPMDFAKSDQLHGRDDDGFNDDEAFDE
WQEFTTSGNQGSLSNAEHIEEPLKRDLSENDVIDPLRVGSKESPNNVIEKSSNEWQGFAS
VSGQGRDFVTSVERSTSDHRLNLVGPVGDEETMSSISHQHSSEINPVDVWHVGNVKAQNT
AEMVKEKNDSFDDWQDSTTTGQVQDTSLNQTGDMMEVSKASHKETDMDSWFIGHSREPAN
TGTMNANNMLDDWQGFTGSDQAQQNSSSTGAEMISVPFEQHGGTVSAPSWANGSSNDAAK
TSSTSIESDPFDVWQNFTKSGHLQENMSSLGREPSSLSPEPAKGNDSLDLWITSNFKESK
SNDVGRTNASSDGWQDFASFDQAQRITKVHVEGHVVKDPSGAETLDLWASSHVNEKNLEQ
ISEHNDLFDDWQDFQNSNPQQTTLQVSSDASLFDITLASRPDAFGEQEIGSVLQVASSEN
SKDKKEGSNESKAFPSDDHLKSTSGMQQMGDVDSLSSLWPANKPEPANTNVEQLLAQMHD
LSFMLKDELSVPDKPIDHSKP

Transcript Sequence

Transcript ID

Zm00001d032109_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:213251636:213254892:1 gene:Zm00001d032109 gene_biotype:protein_coding transcript_biotype:protein_coding description:dentin sialophosphoprotein-related
Sequence

GAGATTGTAGAATTCGATACTGACACTACAGCTTCGAATAAAAGCAAGGATGTACCACCA
CCAAACAGTGAAAAGAAGAGATGACTTCTGCTTCTCTTCCACAAACTCATTTTTTGGAGC
AGGAAAATAAAAGAACAGATAGCAAAAGCCATGAATCTAGATTGGAAGTGCATGCTGCAC
CTAAAAGCTTAATTAGTTCTCAAAGAACAAATCAGATTGAAGCTACTCCAGCATTTGCAA
GTTGGGATGCTGATTTTCAGTCTGCTAGTTCAGAAAATGCTGCCAAAAACTCCAAGCAAC
CTGATCTATTTAAGAGCACTTCTGTGGCCGAGTCTTTTAGTTTCCCAGCTTCAGAGATTG
CCATCAAACCTGTAGTAAGTACTGAAAGTAAAACAAATACGAGAAGTGCCATCCTAGAAC
ATCACTCAGAAGTTTTGGCTTCAGCAAGTAGCACATTATTTGGTGATGACCTTTCTGATC
AAAAGGTTGTCCACCATATCTTTGAGAGCAGCAACGCTCCTGGGTTCACTGAATCCTCTC
TCCCCATGGATTTTGCTAAAAGTGATCAGTTACATGGAAGGGACGATGATGGATTCAATG
ATGATGAAGCTTTTGATGAATGGCAAGAATTTACAACAAGTGGCAATCAAGGCAGCCTAT
CAAATGCGGAACATATTGAGGAACCTTTAAAGAGAGATTTGTCTGAGAATGATGTAATAG
ATCCCTTGCGAGTAGGCAGCAAGGAATCACCCAACAATGTTATTGAAAAATCCTCTAATG
AATGGCAAGGTTTTGCTTCTGTGTCTGGTCAAGGAAGAGATTTTGTGACATCTGTGGAAC
GATCAACAAGTGACCACAGACTAAATTTGGTGGGACCAGTTGGAGATGAAGAGACAATGA
GCAGCATCTCACACCAACATTCTTCAGAAATTAATCCTGTTGATGTATGGCATGTGGGCA
ATGTGAAGGCTCAAAATACTGCAGAAATGGTTAAGGAAAAAAATGATTCTTTTGACGATT
GGCAAGATTCTACTACCACCGGTCAAGTCCAGGACACTTCGTTGAATCAAACTGGGGACA
TGATGGAGGTCTCAAAAGCCAGTCACAAAGAAACAGACATGGACTCATGGTTCATTGGAC
ATTCTAGGGAGCCAGCAAATACGGGTACCATGAATGCAAATAACATGTTGGACGATTGGC
AAGGTTTCACTGGTTCAGATCAAGCACAGCAAAATTCATCTAGCACTGGTGCAGAAATGA
TAAGTGTGCCATTTGAGCAGCATGGTGGAACTGTTTCTGCCCCATCATGGGCAAATGGCA
GCAGTAATGATGCCGCAAAAACATCCTCAACAAGTATAGAAAGCGACCCATTTGATGTTT
GGCAAAATTTTACTAAATCAGGTCACCTGCAAGAAAATATGTCTAGTCTTGGGAGAGAAC
CGAGTAGTCTGTCGCCTGAACCAGCTAAAGGAAATGATTCCTTGGATTTGTGGATTACCA
GCAACTTCAAGGAATCTAAAAGCAATGATGTTGGGAGAACTAATGCCTCATCTGATGGAT
GGCAGGATTTTGCCAGTTTTGATCAAGCTCAGAGAATTACTAAAGTTCATGTGGAAGGAC
ATGTTGTAAAAGATCCTTCAGGGGCTGAAACTTTGGACTTATGGGCCTCAAGTCATGTTA
ATGAAAAGAACCTTGAACAGATAAGTGAACATAATGATCTATTCGATGACTGGCAGGATT
TCCAAAACTCCAATCCACAGCAAACAACCTTACAAGTTTCTTCAGATGCTTCATTATTTG
ATATAACCTTGGCATCAAGGCCTGATGCTTTTGGAGAGCAGGAAATTGGGAGTGTTTTGC
AGGTAGCTTCATCCGAAAACTCAAAGGATAAAAAGGAGGGTTCTAATGAATCAAAAGCAT
TTCCATCTGATGACCACTTGAAAAGCACAAGTGGAATGCAGCAGATGGGTGATGTTGATT
CGCTGTCTTCATTATGGCCAGCTAATAAACCAGAGCCTGCAAATACAAATGTGGAACAGT
TGCTTGCTCAGATGCACGATCTGTCCTTTATGCTCAAGGATGAACTTTCTGTCCCTGATA
AACCCATCGATCATTCAAAACCCTGAAGTGACAACATCAAAAATTGTGCTCTGTTACTAT
CAGCCAAGGAAGATTGTTGTTGCAAGTCCAACCTTTTGGGTGCTGGACGAATTGCAACGA
ATATCCCTTGAGTGGAAAATGCAAGTCAAGTCACAGAAAACCCTGTTGTTCCAACAGTGC
CTTTTATCAGAGTATTGGTCAGCAGAGGATTGTATTTGTTTTCTCTGTTGCTTCGTTGCA
TTGATCGTCAGAGACTCAGAGTCGGGTTGGTTCCTTGACTGTCCCTGAGTGAGGCTGAAA
ACCACGTTTTATGTCTGCCTCTTACATGTATGTACCATTTTGCGGTCTGTATTTTGTAGA
GTCGAACTGAGCTCACCAATCAATGAATTCCATTTCAT