Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032103_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:213126776:213129233:1 gene:Zm00001d032103 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G048522 description:4-coumarate--CoA ligase 1
Sequence	ATGGTGTCGCCTACGGAGCCGCAGGCCGAGACGACGGTGTTCCGCTCGACGCTTCCGGAC ATCGCCATCCCGGACCACCTCCCGCTCCACGACTACGTCCTGGAGCGCCTGGCGGAGCGC CGCGACCGCGCGTGCCTCATCGACGGCGCCACGGGCGAGACGCTCACGTTCGGCGACGTG GACCGCCTGTCACGCCGCGTCGCGGCCGGGATGCGCGCCTGCCTCGGCGTCCGCAGCGGG GGCACGGTGATGCTGCTTCTCCCAAACTCCGTGGAGTTCGCACTCGCGTTCCTCGCGTGC TCCCGCCTCGGCGCCGCCGCCACCACGGCCAACCCGCTCCACACCCCGCCCGAGATCGCC AAGCAGGCGGCGGCCTCCGGCGCCACCGTCGTCATCACCGAGCCGGCTTTCGTCGGCAAG GTGCGGGGTCTTGCCGGCGTCGCCGTCGTCGCCACCGGCGACGGCGCAGAGGGCTGTGTC TCGTTCTCCGACCTCGCCTCCTCCGCCGACGATGGCTCGGCGGCGCTGCCTGAGGCGGCG GCGGCGGCCACGGCCATCGACGTGGCGAACGACGTGGTCGCGCTGCCGTACTCGTCCGGC ACGACGGGGCTGCCCAAGGGGGTGATGCTGTCGCACCGTGGGCTGGTGACCAGCGTGGCG CAGCTCGTCGACGGCGACAACCCGAACCTCTACTTCCGGGAGGACGACGTCGTCCTCTGC GTGCTGCCCATGTTCCACGTGTACTCGCTGCACTCCATCCTGCTGTGCGGGATGCGCGCC GGCGCGGCCCTCGTGATCATGAAGCGCTTCGACACTCTCCGCATGTTCGAGCTGGTGAAG AGGCACGGCATCACGATCGTGCCGCTCGTGCTGCCCATCGCGGTGGAGATGGTCAAGAGC GACGCCATCGACCGCCACGACCTCTCGTCGGTGCGCATGGTCATCTCGGGGGCCGCGCCC ATGGGCAAGGAGCTGCAGGACCTGCTGCGCGCCAAGCTCCCTCGCGCCGTGCTCGGACAG GGTTATGGGATGACAGAGGCAGGCCCGGTGCTCTCGATGTGCATGGCGTTTGCCAAGGAG CCGTTGCCGGTGAAGTCCGGTGCCTGCGGCACGGTGGTGAGGAATGCCGAGCTAAAGATC ATCGACCCGGAGACCGGGCTGTCCCTCCACCGCAACCAGCCCGGGGAGATTTGCATCAGG GGCAAGCAGTTGATGAAAGGGTACCTCAACAACCCGGAGGCAACGGCGAAGACCATCGAC TCGGAGGGGTGGCTGCACACCGGAGACATTGGGTACGTCGACGACGGCGACGAGATCTTC ATCGTCGATCGGCTCAAGGAGCTCATCAAGTACAAGGGGTTCCAAGTCGCTCCGGCGGAG CTCGAGGCCATGCTCATCGCCCACCCCAGCATCGCCGACGCCGCCGTCGTCCAAATGAAG GATGACTCCTGCGGCGAGATCCCGGTGGCGTTCGTCGTGGCGTCCGGCGGCTCCGGGATC ACCGAGGACGAGATCAAGCAGTACGTGGCGAAACAGGTGGTGTTCTACAAGAGGCTGCAC AAGATCTTCTTCGTGGAGGCCATCCCCAAGGCGCCATCCGGCAAGATTTTAAGGAAGGAT CTGAGAGCAAAGCTGGCGTCTGGATTCTCCAACGGGTCATCGTGTTGA

Peptide Sequence

PEP ID	Zm00001d032103_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:213126776:213129233:1 gene:Zm00001d032103 transcript:Zm00001d032103_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G048522 description:4-coumarate--CoA ligase 1
Sequence	MVSPTEPQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDV DRLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIA KQAAASGATVVITEPAFVGKVRGLAGVAVVATGDGAEGCVSFSDLASSADDGSAALPEAA AAATAIDVANDVVALPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLYFREDDVVLC VLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKS DAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKE PLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTID SEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIADAAVVQMK DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKD LRAKLASGFSNGSSC

Transcript Sequence

Transcript ID	Zm00001d032103_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:213126776:213129233:1 gene:Zm00001d032103 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G048522 description:4-coumarate--CoA ligase 1
Sequence	CAGCAGTTGGAAACCTGCCATATACATCCATCCTTCACATAGCTCCGATCCAGGTCCAGC TCCACCAACCCGGAAGCAGCAAGCCTCTTGTCTCCTGCACGTAACTCCAGCCTCCAGCGC CACACGTACACCTCCGCCGGATCGGAAGAAGATGGTGTCGCCTACGGAGCCGCAGGCCGA GACGACGGTGTTCCGCTCGACGCTTCCGGACATCGCCATCCCGGACCACCTCCCGCTCCA CGACTACGTCCTGGAGCGCCTGGCGGAGCGCCGCGACCGCGCGTGCCTCATCGACGGCGC CACGGGCGAGACGCTCACGTTCGGCGACGTGGACCGCCTGTCACGCCGCGTCGCGGCCGG GATGCGCGCCTGCCTCGGCGTCCGCAGCGGGGGCACGGTGATGCTGCTTCTCCCAAACTC CGTGGAGTTCGCACTCGCGTTCCTCGCGTGCTCCCGCCTCGGCGCCGCCGCCACCACGGC CAACCCGCTCCACACCCCGCCCGAGATCGCCAAGCAGGCGGCGGCCTCCGGCGCCACCGT CGTCATCACCGAGCCGGCTTTCGTCGGCAAGGTGCGGGGTCTTGCCGGCGTCGCCGTCGT CGCCACCGGCGACGGCGCAGAGGGCTGTGTCTCGTTCTCCGACCTCGCCTCCTCCGCCGA CGATGGCTCGGCGGCGCTGCCTGAGGCGGCGGCGGCGGCCACGGCCATCGACGTGGCGAA CGACGTGGTCGCGCTGCCGTACTCGTCCGGCACGACGGGGCTGCCCAAGGGGGTGATGCT GTCGCACCGTGGGCTGGTGACCAGCGTGGCGCAGCTCGTCGACGGCGACAACCCGAACCT CTACTTCCGGGAGGACGACGTCGTCCTCTGCGTGCTGCCCATGTTCCACGTGTACTCGCT GCACTCCATCCTGCTGTGCGGGATGCGCGCCGGCGCGGCCCTCGTGATCATGAAGCGCTT CGACACTCTCCGCATGTTCGAGCTGGTGAAGAGGCACGGCATCACGATCGTGCCGCTCGT GCTGCCCATCGCGGTGGAGATGGTCAAGAGCGACGCCATCGACCGCCACGACCTCTCGTC GGTGCGCATGGTCATCTCGGGGGCCGCGCCCATGGGCAAGGAGCTGCAGGACCTGCTGCG CGCCAAGCTCCCTCGCGCCGTGCTCGGACAGGGTTATGGGATGACAGAGGCAGGCCCGGT GCTCTCGATGTGCATGGCGTTTGCCAAGGAGCCGTTGCCGGTGAAGTCCGGTGCCTGCGG CACGGTGGTGAGGAATGCCGAGCTAAAGATCATCGACCCGGAGACCGGGCTGTCCCTCCA CCGCAACCAGCCCGGGGAGATTTGCATCAGGGGCAAGCAGTTGATGAAAGGGTACCTCAA CAACCCGGAGGCAACGGCGAAGACCATCGACTCGGAGGGGTGGCTGCACACCGGAGACAT TGGGTACGTCGACGACGGCGACGAGATCTTCATCGTCGATCGGCTCAAGGAGCTCATCAA GTACAAGGGGTTCCAAGTCGCTCCGGCGGAGCTCGAGGCCATGCTCATCGCCCACCCCAG CATCGCCGACGCCGCCGTCGTCCAAATGAAGGATGACTCCTGCGGCGAGATCCCGGTGGC GTTCGTCGTGGCGTCCGGCGGCTCCGGGATCACCGAGGACGAGATCAAGCAGTACGTGGC GAAACAGGTGGTGTTCTACAAGAGGCTGCACAAGATCTTCTTCGTGGAGGCCATCCCCAA GGCGCCATCCGGCAAGATTTTAAGGAAGGATCTGAGAGCAAAGCTGGCGTCTGGATTCTC CAACGGGTCATCGTGTTGATGCCCCTGAGTTCTTTCTATGCGAAAACGACCCCGATTTTA GTAAATTTTTTTTATGCTGAACAAGCTAAAAAAGATATATATACAGAAAACGGTGTAAAC AAGAAGCAGTCAACCATGTACAAGACATGTTATCTAGATAAATGAAAGTTCAGGTTTGAG TATTTGACTAGTAAACGTTTATTGCTTTGAAAGTAACGGACAGTTAACCGAGCTGCCAAA ATTATGTACTGTCCTGATTAATGTCTGAATGACATTATCACAAGTTAGGACAGCAAAAGG ATACTTTTGTTTTGAAAGATCCGGACATCTAGATTATAG