Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d032079_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:211796761:211802432:-1 gene:Zm00001d032079 gene_biotype:protein_coding transcript_biotype:protein_coding description:Riboflavin synthase-like superfamily protein
Sequence	ATGTGGGCGCCGTCGCGGGGGTCGTCGTCGGGGAGCGGGCGAAGGACCTGGCGCCGGCGC ATCGCGGACTACCTCGCCGACGACCAGACCGACGTGTCGGACAATGAGTCCTTCATCACG GCGCACAGCGACGAGCACGCCGCCCCGGCGTCCGGCGCCGGGGGAATGCTGCCGGCGTTC CTCGCGGACCAGGGCGACCTCGTGGAGGTGATGCTGGAGCTGGACGAGGAGTCCATGGTG GTGCGCAGCGTCACGCCCACCGCCGCCGCGCTGTGCGGGCCCACGTCGCTGCCCCTGCCC GGCGCGCGGAGCCTGAGCCGGTGCTCGTCCACGTCGTCGCGGATTCGCCGGAAGTTCGCG TGGCTGCGGTCGCCGTCGCCGCGCCCCCCGGCCGCGACCGCGGCGTCCGACCAGCAGGTG GTGGTGCGGGAGGCGGCGCTGGCGGCCCGCGAGCGGCGCCGCGCCCAGGCCCGCCTGGAC CGGTCGCGGTCCGGGGCCAGGCGCGCGCTCAAGGGCCTCCGGTTCATCAGCCGCACCACG GGCTCCTCCGACGCCGACGCCGGCGCCGGCGCCGGGCTCTGGCGCGGCGTGGAGGAGCGC TTCAACGCGCTCGCGACCGACGGCCTCCTCGCCCGCGACGACTTCGGCGACTGCATCGGG ATGGTGGACTCCAAGGAGTTCGCCGTGGGCATCTTCGACGCGCTGGCGCGGCGGCGGCGC CAGAACCTGGAGCGGATCAGCAAGGACGAGCTCTACGAGTTCTGGCTGCAAATCTCCGAC CAGAGCTTCGACGCGCGCCTCCAAATCTTCTTCGACATGGTGGACACCAACGTGGACGGT AGGATCACGAGGGAGGAAGTGCAAGAGCTGATCGTTCTGAGCGCGTCGGCGAACAAGCTG TCAAAACTCAAGGAGCAGGCTGAGGAGTACGCGTCCCTGATCATGGAGGAGCTCGATCCG GAGAACCTTGGCTACATAGAGCTGTGGCAGCTGGAGGCGCTGCTCCTGCAGCGCGACGCG TACATGACCTACAGCCGGCCGATGAGCAGCGGCAGCGCGGCGCAGTGGAGCCAGGGCCTG AGCGGCGGCGCGGGCGCGGGCGGGCAGCCGTCGGCGCAGCAGCAGCAGGGCGTCGCGTCG CGGTGGCGGCGGTGGAGCCCGCGTCGCGCGGCGGCGCGGGCGCGCGTGGCGGCGGCGGAG AGCTGGCGGCGCGCGTGGGTGCTGGCGCTGTGGGTCGCGGCCATGGCGGCGCTGTTCGCG TGGCGGTTCGTGCAGTACCGGCGGTCGGCGGCGTTCCGGGTGATGGGGTACTGCCTCCCC ACGGCCAAGGGCGCCGCCGAGACGCTCAAGCTCAACATGGCGCTCGTGCTCCTCCCCGTG TGCCGCAACACGCTGACGTGGCTCCGCTCCACCTGGGCGCGCTTCTTCGTCCCCTTCGAC GACAGCATCGCCTTCCACAAGATCATCGCGACGGCGATCGCGCTGGGCATCTGCCTGCAC GCGGGGAACCACCTGGCGTGCGACTTCCCGCGGCTGATCGCGTCGGCGCCCGAGGAGTAC CGTCTGGTGGCGCGCTTCTTCGGGCGGGACAGGCCCAGCTACCGCGGGCTCCTGGCGGGC GCGGAGGGCGTGACGGGGATCGTCATGGTCACGCTCATGGCCGTGTCCTTCACCCTGGCC ACGCGGCCGTTCCGGAAGCGGGAGGAGGCCAGCAGGGACAAGAAGAAGGCGGCGGCCTGC GCATGCAGGGGCGTCCCGCTCGCCGGCTTCAACGCCTTCTGGTACTCGCACCACCTGCTC ATCGTCGTCTACCTCCTGCTCCTCGTCCACGGCTGGTTCATGTTCCTCGTCGACAAGTGG TACCAGAGGACGACGTGGATGTACATTTCTGTGCCGCTGGCGCTTTACGTCGGGGAACGG ACGCTACGGGCCTTCCGATCCAAGGCCTACGCAGTCAAGATTCTCAAGGTGTGCCTCCTG CCGGGGAACGTCCTGACCGTTACCATGTCGAAGCCCTACGGGTTCCGCTACAGGAGCGGG CAGTACATATTCCTCCAGTGTCCAACAATCTCCCCGTTCGAGTGGCACCCTTTCTCCATC ACCTCAGCTCCCGGAGACGACTGCGTCAGCGTCCACGTCCAGACCAGGGGCGACTGGACA CAGGAGCTCAAGCGCATCTTCGTCGAGAACTACTTCACGCCGTGCGTGCCCAGACGGGCT GCCTTCGGGGACCTAGGCGCGGTGGACCACAAGACCAAGAGCCCGCCGAGGTTGCTGGTC GACGGCCCCTACGGCGCCCCCGCGCAGGACTTCAGGAACTACGACGTGCTGCTCCTCGTC GGCCTCGGGATCGGCGCCACGCCCTTCATCAGCATCCTCAGAGACCTCCTCAACAACATC AAGCTGGCCGACGAGCTCATGGACCTGGCAATGGAGACCGGCCGGGCCGAGGACAGCGCC AGCAACCTGAGCGCGTCGACGGCGAGCGGCGGCGGCAACAAGAGGAGGGCGTACCGAACG ACCTGCGCCCACTTCTACTGGGTCACGAGGGAGCCTGGGTCGTTCGAGTGGTTCAAGGGG GTGATGAACGAGGTCGCCGAGATGGACAATAAGGGTGTCATTGAGCTGCACAACTACCTG ACAAGCGTGTACGAGGAGCGAGACGCGAGGACGACTCTGCTGTCCATGGTGCAGGCCCTC AACCACGCCAAGCATGGCGTCGACATTGTGTCAGGGACAAGGGTCAGGACACATTTTGCA AGGCCTAACTGGAAAGAAGTATTTACGAGGATAGCGTCCAAGCACCCAAATTCTACAGTC GGGGTATTTTACTGTGGGAGACCTACACTTGCCAAAGAACTGAAGAAACTGTCACTTGAC ATGAGCCACAGAACGGGAACCCGATTTGATTTCCACAAGGAGTACTTCTGA

Peptide Sequence

PEP ID	Zm00001d032079_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:211796761:211802432:-1 gene:Zm00001d032079 transcript:Zm00001d032079_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Riboflavin synthase-like superfamily protein
Sequence	MWAPSRGSSSGSGRRTWRRRIADYLADDQTDVSDNESFITAHSDEHAAPASGAGGMLPAF LADQGDLVEVMLELDEESMVVRSVTPTAAALCGPTSLPLPGARSLSRCSSTSSRIRRKFA WLRSPSPRPPAATAASDQQVVVREAALAARERRRAQARLDRSRSGARRALKGLRFISRTT GSSDADAGAGAGLWRGVEERFNALATDGLLARDDFGDCIGMVDSKEFAVGIFDALARRRR QNLERISKDELYEFWLQISDQSFDARLQIFFDMVDTNVDGRITREEVQELIVLSASANKL SKLKEQAEEYASLIMEELDPENLGYIELWQLEALLLQRDAYMTYSRPMSSGSAAQWSQGL SGGAGAGGQPSAQQQQGVASRWRRWSPRRAAARARVAAAESWRRAWVLALWVAAMAALFA WRFVQYRRSAAFRVMGYCLPTAKGAAETLKLNMALVLLPVCRNTLTWLRSTWARFFVPFD DSIAFHKIIATAIALGICLHAGNHLACDFPRLIASAPEEYRLVARFFGRDRPSYRGLLAG AEGVTGIVMVTLMAVSFTLATRPFRKREEASRDKKKAAACACRGVPLAGFNAFWYSHHLL IVVYLLLLVHGWFMFLVDKWYQRTTWMYISVPLALYVGERTLRAFRSKAYAVKILKVCLL PGNVLTVTMSKPYGFRYRSGQYIFLQCPTISPFEWHPFSITSAPGDDCVSVHVQTRGDWT QELKRIFVENYFTPCVPRRAAFGDLGAVDHKTKSPPRLLVDGPYGAPAQDFRNYDVLLLV GLGIGATPFISILRDLLNNIKLADELMDLAMETGRAEDSASNLSASTASGGGNKRRAYRT TCAHFYWVTREPGSFEWFKGVMNEVAEMDNKGVIELHNYLTSVYEERDARTTLLSMVQAL NHAKHGVDIVSGTRVRTHFARPNWKEVFTRIASKHPNSTVGVFYCGRPTLAKELKKLSLD MSHRTGTRFDFHKEYF

Transcript Sequence

Transcript ID	Zm00001d032079_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:211796761:211802432:-1 gene:Zm00001d032079 gene_biotype:protein_coding transcript_biotype:protein_coding description:Riboflavin synthase-like superfamily protein
Sequence	ATGTGGGCGCCGTCGCGGGGGTCGTCGTCGGGGAGCGGGCGAAGGACCTGGCGCCGGCGC ATCGCGGACTACCTCGCCGACGACCAGACCGACGTGTCGGACAATGAGTCCTTCATCACG GCGCACAGCGACGAGCACGCCGCCCCGGCGTCCGGCGCCGGGGGAATGCTGCCGGCGTTC CTCGCGGACCAGGGCGACCTCGTGGAGGTGATGCTGGAGCTGGACGAGGAGTCCATGGTG GTGCGCAGCGTCACGCCCACCGCCGCCGCGCTGTGCGGGCCCACGTCGCTGCCCCTGCCC GGCGCGCGGAGCCTGAGCCGGTGCTCGTCCACGTCGTCGCGGATTCGCCGGAAGTTCGCG TGGCTGCGGTCGCCGTCGCCGCGCCCCCCGGCCGCGACCGCGGCGTCCGACCAGCAGGTG GTGGTGCGGGAGGCGGCGCTGGCGGCCCGCGAGCGGCGCCGCGCCCAGGCCCGCCTGGAC CGGTCGCGGTCCGGGGCCAGGCGCGCGCTCAAGGGCCTCCGGTTCATCAGCCGCACCACG GGCTCCTCCGACGCCGACGCCGGCGCCGGCGCCGGGCTCTGGCGCGGCGTGGAGGAGCGC TTCAACGCGCTCGCGACCGACGGCCTCCTCGCCCGCGACGACTTCGGCGACTGCATCGGG ATGGTGGACTCCAAGGAGTTCGCCGTGGGCATCTTCGACGCGCTGGCGCGGCGGCGGCGC CAGAACCTGGAGCGGATCAGCAAGGACGAGCTCTACGAGTTCTGGCTGCAAATCTCCGAC CAGAGCTTCGACGCGCGCCTCCAAATCTTCTTCGACATGGTGGACACCAACGTGGACGGT AGGATCACGAGGGAGGAAGTGCAAGAGCTGATCGTTCTGAGCGCGTCGGCGAACAAGCTG TCAAAACTCAAGGAGCAGGCTGAGGAGTACGCGTCCCTGATCATGGAGGAGCTCGATCCG GAGAACCTTGGCTACATAGAGCTGTGGCAGCTGGAGGCGCTGCTCCTGCAGCGCGACGCG TACATGACCTACAGCCGGCCGATGAGCAGCGGCAGCGCGGCGCAGTGGAGCCAGGGCCTG AGCGGCGGCGCGGGCGCGGGCGGGCAGCCGTCGGCGCAGCAGCAGCAGGGCGTCGCGTCG CGGTGGCGGCGGTGGAGCCCGCGTCGCGCGGCGGCGCGGGCGCGCGTGGCGGCGGCGGAG AGCTGGCGGCGCGCGTGGGTGCTGGCGCTGTGGGTCGCGGCCATGGCGGCGCTGTTCGCG TGGCGGTTCGTGCAGTACCGGCGGTCGGCGGCGTTCCGGGTGATGGGGTACTGCCTCCCC ACGGCCAAGGGCGCCGCCGAGACGCTCAAGCTCAACATGGCGCTCGTGCTCCTCCCCGTG TGCCGCAACACGCTGACGTGGCTCCGCTCCACCTGGGCGCGCTTCTTCGTCCCCTTCGAC GACAGCATCGCCTTCCACAAGATCATCGCGACGGCGATCGCGCTGGGCATCTGCCTGCAC GCGGGGAACCACCTGGCGTGCGACTTCCCGCGGCTGATCGCGTCGGCGCCCGAGGAGTAC CGTCTGGTGGCGCGCTTCTTCGGGCGGGACAGGCCCAGCTACCGCGGGCTCCTGGCGGGC GCGGAGGGCGTGACGGGGATCGTCATGGTCACGCTCATGGCCGTGTCCTTCACCCTGGCC ACGCGGCCGTTCCGGAAGCGGGAGGAGGCCAGCAGGGACAAGAAGAAGGCGGCGGCCTGC GCATGCAGGGGCGTCCCGCTCGCCGGCTTCAACGCCTTCTGGTACTCGCACCACCTGCTC ATCGTCGTCTACCTCCTGCTCCTCGTCCACGGCTGGTTCATGTTCCTCGTCGACAAGTGG TACCAGAGGACGACGTGGATGTACATTTCTGTGCCGCTGGCGCTTTACGTCGGGGAACGG ACGCTACGGGCCTTCCGATCCAAGGCCTACGCAGTCAAGATTCTCAAGGTGTGCCTCCTG CCGGGGAACGTCCTGACCGTTACCATGTCGAAGCCCTACGGGTTCCGCTACAGGAGCGGG CAGTACATATTCCTCCAGTGTCCAACAATCTCCCCGTTCGAGTGGCACCCTTTCTCCATC ACCTCAGCTCCCGGAGACGACTGCGTCAGCGTCCACGTCCAGACCAGGGGCGACTGGACA CAGGAGCTCAAGCGCATCTTCGTCGAGAACTACTTCACGCCGTGCGTGCCCAGACGGGCT GCCTTCGGGGACCTAGGCGCGGTGGACCACAAGACCAAGAGCCCGCCGAGGTTGCTGGTC GACGGCCCCTACGGCGCCCCCGCGCAGGACTTCAGGAACTACGACGTGCTGCTCCTCGTC GGCCTCGGGATCGGCGCCACGCCCTTCATCAGCATCCTCAGAGACCTCCTCAACAACATC AAGCTGGCCGACGAGCTCATGGACCTGGCAATGGAGACCGGCCGGGCCGAGGACAGCGCC AGCAACCTGAGCGCGTCGACGGCGAGCGGCGGCGGCAACAAGAGGAGGGCGTACCGAACG ACCTGCGCCCACTTCTACTGGGTCACGAGGGAGCCTGGGTCGTTCGAGTGGTTCAAGGGG GTGATGAACGAGGTCGCCGAGATGGACAATAAGGGTGTCATTGAGCTGCACAACTACCTG ACAAGCGTGTACGAGGAGCGAGACGCGAGGACGACTCTGCTGTCCATGGTGCAGGCCCTC AACCACGCCAAGCATGGCGTCGACATTGTGTCAGGGACAAGGGTCAGGACACATTTTGCA AGGCCTAACTGGAAAGAAGTATTTACGAGGATAGCGTCCAAGCACCCAAATTCTACAGTC GGGGTATTTTACTGTGGGAGACCTACACTTGCCAAAGAACTGAAGAAACTGTCACTTGAC ATGAGCCACAGAACGGGAACCCGATTTGATTTCCACAAGGAGTACTTCTGATGGAAAATA CAAGTGCCCCTGATTTCTTTTAGTACTAGAAGATACAGATAAAAAAATTCACAAATTTTG CGTAGAAGCGAACTGATCCTCTTTCACAGTATGTAAATGTACATGGTATAAAGCAGAGAG TAGTTAGAAACGTTTTTTTTTCTTTCTTAACCAAATGGGAGGGTGAAAATATGTCCTGCG CTTTCAGACAGCCATTGGTTACTGCAGATATAACTGTATAGATCATATCATTGTATGCTA AGCATGCAAGAGACTTGAGGCCAACAATCTGAATGCGTATCACTCAATTAACTGGTC