Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032064_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:211140441:211148020:1 gene:Zm00001d032064 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-fucosyltransferase family protein
Sequence

ATGTTATTATTATTTAGAACTGAAGGAAGACTTGGATGCAATGTTTCCCATGTGAATACA
TACAGTGGAATTGCAGAAAAATCAATGGATAAGTTTGCTGCATTGATATCATCTTTCAGA
TACCCCGGTCCCCGTGCCAGTGGCCTTCATGCTCCTTTAAAGGATGTGAAAAACACACTT
TCTGTGAGATCTATTCTTAAAGCTCCAGAAAAAGGCACATTCAGACACACAGCAAAGAAA
ACAGTCCGCCACCGAGAAGGAGAAGTCTCTGGTCGAGAAGAAAAGTCCATCGAGAGCCGC
AAGCTCATCTTCACCCGCGCAAAGCAGTACGCCGAGGAATACGATGCCCTGCCTATCAGT
TTTGACAAAGTGTTTGACTTTAACAAGTTCAATGCGCGTTGCCATGGCTTCGGGACCGGT
AGAAGGTGGACGGCAGACAGAGATTTGGATCAACTACAGCAATCCATAGGGAGCAATGCG
GATGACTCTGAAGTCATTGAAATCGTTGGGGAAAATCCATTTCTGTGGCCTGACCACTGG
CCAGTCAAAGACTATGCCAAAATCTTCGATTGCCTTGTCTTAGTTCCTGAGATAGAAACT
GAAGTGGTCAAGGTGATATCCAAGATTAGAGAGGCAGGCCAAAGAGCAAGACATGAAGCT
GGGGGTTCTCATAGTAAGCAGAGGAGAGATAGCTCAACAAATCCGCCTGTATCGTATGTC
GCTGTTCACATGAGAGTAGAAAAAGATTGGATGATACATTGCAAGAAGTGGGAGCAGCGG
TCCAAATCACATGAAATCTGCAGTAGCAAAGAAGAGATCATTCATAAGGTCTCACAGATC
ACTGACCTACGTCGGCCAGTTGTTGTTTATCTTGCGGTAGCTGACAGCCTTCTTGAAGAC
GATTCAATAACCAGTGGGTGGAGAGTGGGTATGGTTGCTTACGAGAAGAAGAAGCTTGGC
GTTACTGACATCTACGATCGGCAGCCATATCTTATAAAGTCTGCCATTGACTTTGAGGTG
TGCTCGAGAGCAGACGTGTTTGTCGGCAACAGCTTCTCAACATTCTCCAACCTCGTAGTG
CTGTCCAGGACAGAAAGGCTGTATAACCTAGGAAAGGCGAGCTTGTGTGGCGAGAACATC
GGGCTTTCGTCATATGCGTACAATGTCATGGGCGACGATGATGCTGCTCAACCGGCAAAA
GGCACTGCTGATCCTGTGAACCCATCCCCTAAGAAGTGCAAGGGCTTCCTTTCATTCGGC
TTCAGCTGGACCAAGTCTTGGAGCAGACGTGGTGCAACCAGCAGCTCAGAGAACTTCGGG
AAGACGCTGTCTGCAGCCCTTACAGGCAGTGCTCAAGGCAACAACAGGGGCGGTGGCAAT
GAGCACCAGGGCTGTCAAGACCCTGCTGCCCACTGCCTGCATCTGCACAGGAGGTCCAAC
ACGCCTGGCGTCTCTGCTTCCCCGTCTGGACCTGGTGCCCTTCGGCCTCAGCTGATCTCA
GTGCAGATGCAGTCGGTGTCTGTGGCTGGTGTGGAGGACGTGGCGGAGTCCACCGCCTCA
GTTTCTCCCAGAGAGAAGCGCAGGAGGAGCTTGCAATAG

Peptide Sequence

PEP ID

Zm00001d032064_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:211140441:211148020:1 gene:Zm00001d032064 transcript:Zm00001d032064_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-fucosyltransferase family protein
Sequence

MLLLFRTEGRLGCNVSHVNTYSGIAEKSMDKFAALISSFRYPGPRASGLHAPLKDVKNTL
SVRSILKAPEKGTFRHTAKKTVRHREGEVSGREEKSIESRKLIFTRAKQYAEEYDALPIS
FDKVFDFNKFNARCHGFGTGRRWTADRDLDQLQQSIGSNADDSEVIEIVGENPFLWPDHW
PVKDYAKIFDCLVLVPEIETEVVKVISKIREAGQRARHEAGGSHSKQRRDSSTNPPVSYV
AVHMRVEKDWMIHCKKWEQRSKSHEICSSKEEIIHKVSQITDLRRPVVVYLAVADSLLED
DSITSGWRVGMVAYEKKKLGVTDIYDRQPYLIKSAIDFEVCSRADVFVGNSFSTFSNLVV
LSRTERLYNLGKASLCGENIGLSSYAYNVMGDDDAAQPAKGTADPVNPSPKKCKGFLSFG
FSWTKSWSRRGATSSSENFGKTLSAALTGSAQGNNRGGGNEHQGCQDPAAHCLHLHRRSN
TPGVSASPSGPGALRPQLISVQMQSVSVAGVEDVAESTASVSPREKRRRSLQ

Transcript Sequence

Transcript ID

Zm00001d032064_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:211140441:211148020:1 gene:Zm00001d032064 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-fucosyltransferase family protein
Sequence

TATCATATTTAGACATGATCAAGGTAGCATAGGTACATGTAATATGGATACATGAACCCA
TTATTATTATGTTATTATTATTTAGAACTGAAGGAAGACTTGGATGCAATGTTTCCCATG
TGAATACATACAGTGGAATTGCAGAAAAATCAATGGATAAGTTTGCTGCATTGATATCAT
CTTTCAGATACCCCGGTCCCCGTGCCAGTGGCCTTCATGCTCCTTTAAAGGATGTGAAAA
ACACACTTTCTGTGAGATCTATTCTTAAAGCTCCAGAAAAAGGCACATTCAGACACACAG
CAAAGAAAACAGTCCGCCACCGAGAAGGAGAAGTCTCTGGTCGAGAAGAAAAGTCCATCG
AGAGCCGCAAGCTCATCTTCACCCGCGCAAAGCAGTACGCCGAGGAATACGATGCCCTGC
CTATCAGTTTTGACAAAGTGTTTGACTTTAACAAGTTCAATGCGCGTTGCCATGGCTTCG
GGACCGGTAGAAGGTGGACGGCAGACAGAGATTTGGATCAACTACAGCAATCCATAGGGA
GCAATGCGGATGACTCTGAAGTCATTGAAATCGTTGGGGAAAATCCATTTCTGTGGCCTG
ACCACTGGCCAGTCAAAGACTATGCCAAAATCTTCGATTGCCTTGTCTTAGTTCCTGAGA
TAGAAACTGAAGTGGTCAAGGTGATATCCAAGATTAGAGAGGCAGGCCAAAGAGCAAGAC
ATGAAGCTGGGGGTTCTCATAGTAAGCAGAGGAGAGATAGCTCAACAAATCCGCCTGTAT
CGTATGTCGCTGTTCACATGAGAGTAGAAAAAGATTGGATGATACATTGCAAGAAGTGGG
AGCAGCGGTCCAAATCACATGAAATCTGCAGTAGCAAAGAAGAGATCATTCATAAGGTCT
CACAGATCACTGACCTACGTCGGCCAGTTGTTGTTTATCTTGCGGTAGCTGACAGCCTTC
TTGAAGACGATTCAATAACCAGTGGGTGGAGAGTGGGTATGGTTGCTTACGAGAAGAAGA
AGCTTGGCGTTACTGACATCTACGATCGGCAGCCATATCTTATAAAGTCTGCCATTGACT
TTGAGGTGTGCTCGAGAGCAGACGTGTTTGTCGGCAACAGCTTCTCAACATTCTCCAACC
TCGTAGTGCTGTCCAGGACAGAAAGGCTGTATAACCTAGGAAAGGCGAGCTTGTGTGGCG
AGAACATCGGGCTTTCGTCATATGCGTACAATGTCATGGGCGACGATGATGCTGCTCAAC
CGGCAAAAGGCACTGCTGATCCTGTGAACCCATCCCCTAAGAAGTGCAAGGGCTTCCTTT
CATTCGGCTTCAGCTGGACCAAGTCTTGGAGCAGACGTGGTGCAACCAGCAGCTCAGAGA
ACTTCGGGAAGACGCTGTCTGCAGCCCTTACAGGCAGTGCTCAAGGCAACAACAGGGGCG
GTGGCAATGAGCACCAGGGCTGTCAAGACCCTGCTGCCCACTGCCTGCATCTGCACAGGA
GGTCCAACACGCCTGGCGTCTCTGCTTCCCCGTCTGGACCTGGTGCCCTTCGGCCTCAGC
TGATCTCAGTGCAGATGCAGTCGGTGTCTGTGGCTGGTGTGGAGGACGTGGCGGAGTCCA
CCGCCTCAGTTTCTCCCAGAGAGAAGCGCAGGAGGAGCTTGCAATAG