Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d032057_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:211043531:211046399:1 gene:Zm00001d032057 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACTTGACAGGATGGCAGCAGGAGAACGATGACGACGACGGCGTGTTTCCTATCCAC
CAACAGCCTGCACAACAGAACCGACCAGGAGTCCAGACCATGGACGATGTCCAGAACCAG
CAGCATGGTCGGTCCCTGTTCATGCAGCCCGGCCCCCAGACGCTCAATGTGCCGCACAAC
AACCCCATGATCTCCCCCGACGCTGGCTGGCCGAGCAGCAGCAATGTCGCAGCCTTCGCT
GGCGCCAGCAACACCACCGGCCCAACACTGCTGCAGGGAGTGTACCAAGCACCGGCGGCA
CGAGGAGCAAGAGCAGCATCGCCGGCACCGCATGCGGTGTACGCACCACCAGCGCCAGGA
CTGCGCCCTCCGGTGTATCAGCAGCAGCAGCAACCCATGGCGCCCCTCTACGACTTCGGC
GACATGGTCGCACCGCCCGCGGCAGTACCACTACCAATACCAACCATGGCCGCCACCAGC
GGACACCAGCCGCAGTTCACCCTCAACCATCACCACCAGCAGCAGCAGGAGGAGGAAATG
TTTGCGCCGCGGAGGCAAGGCGGCTGGATGGGGAGTCGTCGTCGTCGCGAGACCGGACCC
ATCATGCTTTCCTTCCAGCAGCCACAGGCCGCTGATCCTTTCACCCCTATGGCTGGCAGT
GGCCCTTTCACGCCTATGGCGGCTGGGCAGGCTGGCAGTGGCACGGCCTTTGGAGCTTCA
TCACCTACAGGTGCTACAGATGCAGGAGCGTACGGGGCCGCTGCCGTGGCACAGGCACAG
CTTCAGTCCCCGAACGCTGGTGCTCAACCAGCTGACAGCAGCTTTGATGATGTGCTCCGA
GCCATGATGGAGATGGACTACTATGCCAACAACTGCAGCGCCGAAGCACTCATGGCCCCG
GCTACAGACGAGTTAGCAGGTATGCAAGCAGCAGCAGCACTTGGCAGCAGCGGCAACTAC
AACGCTGGACCATTCATGGTGACGGATGCGAATGGCGGCAATGGTACACCATTCATGGCG
CTGGCGCTAGCGCCACAGGATCCCGCCGCGCCAACTGGGAACCAAAACCAAGTCCAGGTG
GAGTTGGGAGCACCGGACATCTACGGCGGATCACTGCTGGTGGGGTCTCATCAAGGCGGC
GGGACTAGTGCAATGTTCAATGGGGATGGTGACATGGCACCAATGTTTCCTTCTAACGAG
TACGGTGCGACTGCGAACGCCATGTTCTCTCTGGATGCCCTTCTGGATTTCGACGACGGC
GTCCCAACGTACCCTGAAGGCCACCAGGTCGCTGCAGCTGATAGCACCACCGCCAGCAAC
GCTACAGGAATCATGTCAAATGGCGGGGAAAGTGGTGGCTCGGGACCGAGCTGGAACATG
GGAGCTGCAGCTGCTGATGAAGGTCTGGATATGTTGGAAGAGTTCTTAATGGAGGACAAT
GAGTCTGGTTTTCTTCTCCCGCAAGACATGAACAATGGCCTCCAGTAG

Peptide Sequence

PEP ID

Zm00001d032057_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:211043531:211046399:1 gene:Zm00001d032057 transcript:Zm00001d032057_T003 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNLTGWQQENDDDDGVFPIHQQPAQQNRPGVQTMDDVQNQQHGRSLFMQPGPQTLNVPHN
NPMISPDAGWPSSSNVAAFAGASNTTGPTLLQGVYQAPAARGARAASPAPHAVYAPPAPG
LRPPVYQQQQQPMAPLYDFGDMVAPPAAVPLPIPTMAATSGHQPQFTLNHHHQQQQEEEM
FAPRRQGGWMGSRRRRETGPIMLSFQQPQAADPFTPMAGSGPFTPMAAGQAGSGTAFGAS
SPTGATDAGAYGAAAVAQAQLQSPNAGAQPADSSFDDVLRAMMEMDYYANNCSAEALMAP
ATDELAGMQAAAALGSSGNYNAGPFMVTDANGGNGTPFMALALAPQDPAAPTGNQNQVQV
ELGAPDIYGGSLLVGSHQGGGTSAMFNGDGDMAPMFPSNEYGATANAMFSLDALLDFDDG
VPTYPEGHQVAAADSTTASNATGIMSNGGESGGSGPSWNMGAAAADEGLDMLEEFLMEDN
ESGFLLPQDMNNGLQ

Transcript Sequence

Transcript ID

Zm00001d032057_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:211043531:211046399:1 gene:Zm00001d032057 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TACGTGAGTTGATTACAAAGAATTTAAGTTTTTTTAAAAAAAATGTTGATGCACGACAAC
GGTGAAAATGCTGGAACGACCTAGTACTTTATAGTAGTAGAGATATAATTTTTATGTCGA
CCATAATGACACTACCTATAAATTATGCTCCCTAAATTATTTATAGGTGTTCTGCTATTT
TTTTTCAAAAACTATGCTGGAGAATTGCTGAGTAAATTTATTAGAAAGCAAACGAAGACA
CCGGTGAAAAAAAATACCTCACTTCACTAGTCTTTCTTTGCAGTGGCCACGTGCGAGAGG
CCAACGTCGGTAGTCAAGCTCATCACCGGAAGACTCAAAGACGCCGACGTCGTCTTCATC
GACGCTCTGAGAGCCGCAACCTGCGGCTTCGACTTCCGCAGAATCGTGGAGTCCCATCTG
TGCATCCCAGTCGTCTACTTCCTCTCTCGGGATTATGGGGTCACCGGCGACGTGTCTGAG
GCTCTGCAGCGCACTGTTTGGGCTGCCACCTACGTCGTCAGGAAGCCCCTCGACGCTGGA
GAACTCAGCAGGCTGTGGAAGGTCATCAAGTGGTCCAAGTTTTTGCTGCGGCGCGCATGG
CCGGAATGGCCTCGCGGCAGCCGAGTGCGTCCCGCCGTCGTCGGAGCACTTCTGCCCGGC
TCCTCTACCGTTGATGGCCGATGGGAAGACGACGACGACGACGGCCGCGAACATTTCAGG
GCGGTGAGGGCAGGAAGAGGCCGGAGGAGGAAGCTGGGTGATCGCCAATACCACGGCGGA
CGATCCTCCGGCCGCGGTGGCGGCGGCGGCGTTGCAGGTCCATTTGGAAGTAAACCTTTA
TATATTTTGGTTCTTATGTTAATGAAGTTACCGCATAATTAAGCTACTTTAATCATGCAT
CTCTCCCTGGTCCCTGCATGTCCCTTGTCCCTTCGCAGTTGGAATTGGAATAGGACGACG
CCAGCCAACTGAGAGACTGGAGCAAATGAACTTGACAGGATGGCAGCAGGAGAACGATGA
CGACGACGGCGTGTTTCCTATCCACCAACAGCCTGCACAACAGAACCGACCAGGAGTCCA
GACCATGGACGATGTCCAGAACCAGCAGCATGGTCGGTCCCTGTTCATGCAGCCCGGCCC
CCAGACGCTCAATGTGCCGCACAACAACCCCATGATCTCCCCCGACGCTGGCTGGCCGAG
CAGCAGCAATGTCGCAGCCTTCGCTGGCGCCAGCAACACCACCGGCCCAACACTGCTGCA
GGGAGTGTACCAAGCACCGGCGGCACGAGGAGCAAGAGCAGCATCGCCGGCACCGCATGC
GGTGTACGCACCACCAGCGCCAGGACTGCGCCCTCCGGTGTATCAGCAGCAGCAGCAACC
CATGGCGCCCCTCTACGACTTCGGCGACATGGTCGCACCGCCCGCGGCAGTACCACTACC
AATACCAACCATGGCCGCCACCAGCGGACACCAGCCGCAGTTCACCCTCAACCATCACCA
CCAGCAGCAGCAGGAGGAGGAAATGTTTGCGCCGCGGAGGCAAGGCGGCTGGATGGGGAG
TCGTCGTCGTCGCGAGACCGGACCCATCATGCTTTCCTTCCAGCAGCCACAGGCCGCTGA
TCCTTTCACCCCTATGGCTGGCAGTGGCCCTTTCACGCCTATGGCGGCTGGGCAGGCTGG
CAGTGGCACGGCCTTTGGAGCTTCATCACCTACAGGTGCTACAGATGCAGGAGCGTACGG
GGCCGCTGCCGTGGCACAGGCACAGCTTCAGTCCCCGAACGCTGGTGCTCAACCAGCTGA
CAGCAGCTTTGATGATGTGCTCCGAGCCATGATGGAGATGGACTACTATGCCAACAACTG
CAGCGCCGAAGCACTCATGGCCCCGGCTACAGACGAGTTAGCAGGTATGCAAGCAGCAGC
AGCACTTGGCAGCAGCGGCAACTACAACGCTGGACCATTCATGGTGACGGATGCGAATGG
CGGCAATGGTACACCATTCATGGCGCTGGCGCTAGCGCCACAGGATCCCGCCGCGCCAAC
TGGGAACCAAAACCAAGTCCAGGTGGAGTTGGGAGCACCGGACATCTACGGCGGATCACT
GCTGGTGGGGTCTCATCAAGGCGGCGGGACTAGTGCAATGTTCAATGGGGATGGTGACAT
GGCACCAATGTTTCCTTCTAACGAGTACGGTGCGACTGCGAACGCCATGTTCTCTCTGGA
TGCCCTTCTGGATTTCGACGACGGCGTCCCAACGTACCCTGAAGGCCACCAGGTCGCTGC
AGCTGATAGCACCACCGCCAGCAACGCTACAGGAATCATGTCAAATGGCGGGGAAAGTGG
TGGCTCGGGACCGAGCTGGAACATGGGAGCTGCAGCTGCTGATGAAGGTCTGGATATGTT
GGAAGAGTTCTTAATGGAGGACAATGAGTCTGGTTTTCTTCTCCCGCAAGACATGAACAA
TGGCCTCCAGTAGCTGGTGGTGCAGCCATGACGAGAAACCTGAGAGATTTTAAGAGTTCG
AGAGAGGAAGAGAACTATAAATTAGCTAGATTCAATAATGTACAGGCAACCCTGTCTAAA
GTTCTGTTTGCTGTAGAACTAGATACTTGGTGCACCCGTACTTAGAAGTGTTTGGTAAGA
TACAGAAAAGGGGAGTGCCCCTGTG