Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031988_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:1:208835641:208838156:-1 gene:Zm00001d031988 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane 9 superfamily member 9
Sequence

ATGGGGGAACCCAAGATGTGCCAGATTATCTGCAAAGCAAAAATTGATGATAAACAGGCA
AAGGAGCTCAAGGAAAAAATAGAGGATGAGTATCGGGTGAACATGATTCTTGACAATCTC
CCACTAGTTGTTCCTCTTGCAAGGCAGGATAGGGGTGCTACTGTTTACCAGGCTGGATAT
CATGTTGGTGTCAAGGGCCAATACGCTGGTAACAATGATAAGAAGTCCTTTATCCACAAT
CACTTGGCATTTTTAGTAAAATACCACAAGGATGAAACTACAGATCTCTCTAGAATTGTT
GGATTTGAGGTCAAACCATTCAGTATCAATCACCAGTTTGAAGGGCCGTGGAATGATAAA
AACACTCGTTTAATCACATGTGATCCTCATGCCAGCAAGCTTCTGGTAAACTCAGATACT
CCTCAGGAGGTTGAAGCCGGGAAGGAAATCATATTTACCTATGATGTAGGCTTCGAGGAG
AGTGATATCAAGTGGGCTTCTCGCTGGGACACCTACTTGTTAATGATAGATGATCAAATT
CACTGGTTTTCTATTGTGAACTCTCTCATGATCGTACTCTTCTTATCTGGGATGGTGGCA
ATGATTATGCTCCGCACCCTGTATAGAGATATCTCTAGGTACAATCAGCTTGAAACTGAA
GAAGAAACCCAAGAGGAGACAGGATGGAAGCTTGTTCATGGAGACGTATTCCGCCCTCCT
GCAAACTCTGACTTACTCTGTGTCTGTGTTGGGACTGGTGTTCAGTTCTTCGGTATGCTG
CTAGTAACCATGATCTTTGCTGTTCTGGGTTTCCTTTCACCATCAAACCGGGGAGGACTG
ATGACTGCCATGCTGCTCACTTGGGTCTTGATGGGGTTGTTTGCTGGATATGCTTCTTCA
CGCCTGTATAAGATGTTGAAAGGATCAGAATGGAAGAGCATCACCCTGAGGACCGCCTTC
CTGTTTCCTGGGATTGCTTTCGGTATTTTCTTCGTCCTTAATGCTCTAATATGGGGGGAG
AAGTCGTCTGGCGCTGTTCCTTTCACCACAATGTTTGCCTTGGTCCTCCTCTGGTTTGGT
ATCTCGGTTCCTCTTGTATTTGTCGGGAGCTATCTGGGCTTCAAGCAACCTGCCATTGAG
GCTCCGGTGAAGACGAACAAGATCCCGAGACAGGTCCCCGAGCAAGCTTGGTACATGAAC
CCTGCCTTCACCATTCTGATTGGTGGCATACTTCCGTTCGGAGCAGTCTTCATCGAGCTC
TTCTTCATCCTGACGTCGATCTGGCTTCATCAGTTCTACTACATCTTTGGCTTCCTGTTC
CTGGTGTTCATTATCCTCATCGTCACCTGTGCGGAGATCACAATCGTGCTGTGCTATTTC
CAACTGTGCAGTGAGGACTACCTGTGGTGGTGGAGGTCCTTTCTGACTTCAGGATCATCA
GCAATCTACCTCTTCCTGTATGCCGGGTTCTACTTCTTCACTAAGCTGCAGATCACTAAG
GTGGTGTCGGGCATGCTGTACTTTGGCTACATGCTTCTTGCCTCGTTCGCTTTCTGTGTG
CTCACCGGTACGATCGGCTTCTACGCCTGCTTCTGCTTCACAAGATTGATTTATTCTTCT
GTGAAGATCGACTAG

Peptide Sequence

PEP ID

Zm00001d031988_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:1:208835641:208838156:-1 gene:Zm00001d031988 transcript:Zm00001d031988_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane 9 superfamily member 9
Sequence

MGEPKMCQIICKAKIDDKQAKELKEKIEDEYRVNMILDNLPLVVPLARQDRGATVYQAGY
HVGVKGQYAGNNDKKSFIHNHLAFLVKYHKDETTDLSRIVGFEVKPFSINHQFEGPWNDK
NTRLITCDPHASKLLVNSDTPQEVEAGKEIIFTYDVGFEESDIKWASRWDTYLLMIDDQI
HWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISRYNQLETEEETQEETGWKLVHGDVFRPP
ANSDLLCVCVGTGVQFFGMLLVTMIFAVLGFLSPSNRGGLMTAMLLTWVLMGLFAGYASS
RLYKMLKGSEWKSITLRTAFLFPGIAFGIFFVLNALIWGEKSSGAVPFTTMFALVLLWFG
ISVPLVFVGSYLGFKQPAIEAPVKTNKIPRQVPEQAWYMNPAFTILIGGILPFGAVFIEL
FFILTSIWLHQFYYIFGFLFLVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSFLTSGSS
AIYLFLYAGFYFFTKLQITKVVSGMLYFGYMLLASFAFCVLTGTIGFYACFCFTRLIYSS
VKID

Transcript Sequence

Transcript ID

Zm00001d031988_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:208835641:208838156:-1 gene:Zm00001d031988 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane 9 superfamily member 9
Sequence

ACATAATTTTCTGCAGAAAGATCCACTTTTGGTGAAGTGCAGAGAATCTTGGAGAAGTTC
TGCGTGGTGATCGCATTGAGAACTCTCCTTATGTGTTTGAGATGGGGGAACCCAAGATGT
GCCAGATTATCTGCAAAGCAAAAATTGATGATAAACAGGCAAAGGAGCTCAAGGAAAAAA
TAGAGGATGAGTATCGGGTGAACATGATTCTTGACAATCTCCCACTAGTTGTTCCTCTTG
CAAGGCAGGATAGGGGTGCTACTGTTTACCAGGCTGGATATCATGTTGGTGTCAAGGGCC
AATACGCTGGTAACAATGATAAGAAGTCCTTTATCCACAATCACTTGGCATTTTTAGTAA
AATACCACAAGGATGAAACTACAGATCTCTCTAGAATTGTTGGATTTGAGGTCAAACCAT
TCAGTATCAATCACCAGTTTGAAGGGCCGTGGAATGATAAAAACACTCGTTTAATCACAT
GTGATCCTCATGCCAGCAAGCTTCTGGTAAACTCAGATACTCCTCAGGAGGTTGAAGCCG
GGAAGGAAATCATATTTACCTATGATGTAGGCTTCGAGGAGAGTGATATCAAGTGGGCTT
CTCGCTGGGACACCTACTTGTTAATGATAGATGATCAAATTCACTGGTTTTCTATTGTGA
ACTCTCTCATGATCGTACTCTTCTTATCTGGGATGGTGGCAATGATTATGCTCCGCACCC
TGTATAGAGATATCTCTAGGTACAATCAGCTTGAAACTGAAGAAGAAACCCAAGAGGAGA
CAGGATGGAAGCTTGTTCATGGAGACGTATTCCGCCCTCCTGCAAACTCTGACTTACTCT
GTGTCTGTGTTGGGACTGGTGTTCAGTTCTTCGGTATGCTGCTAGTAACCATGATCTTTG
CTGTTCTGGGTTTCCTTTCACCATCAAACCGGGGAGGACTGATGACTGCCATGCTGCTCA
CTTGGGTCTTGATGGGGTTGTTTGCTGGATATGCTTCTTCACGCCTGTATAAGATGTTGA
AAGGATCAGAATGGAAGAGCATCACCCTGAGGACCGCCTTCCTGTTTCCTGGGATTGCTT
TCGGTATTTTCTTCGTCCTTAATGCTCTAATATGGGGGGAGAAGTCGTCTGGCGCTGTTC
CTTTCACCACAATGTTTGCCTTGGTCCTCCTCTGGTTTGGTATCTCGGTTCCTCTTGTAT
TTGTCGGGAGCTATCTGGGCTTCAAGCAACCTGCCATTGAGGCTCCGGTGAAGACGAACA
AGATCCCGAGACAGGTCCCCGAGCAAGCTTGGTACATGAACCCTGCCTTCACCATTCTGA
TTGGTGGCATACTTCCGTTCGGAGCAGTCTTCATCGAGCTCTTCTTCATCCTGACGTCGA
TCTGGCTTCATCAGTTCTACTACATCTTTGGCTTCCTGTTCCTGGTGTTCATTATCCTCA
TCGTCACCTGTGCGGAGATCACAATCGTGCTGTGCTATTTCCAACTGTGCAGTGAGGACT
ACCTGTGGTGGTGGAGGTCCTTTCTGACTTCAGGATCATCAGCAATCTACCTCTTCCTGT
ATGCCGGGTTCTACTTCTTCACTAAGCTGCAGATCACTAAGGTGGTGTCGGGCATGCTGT
ACTTTGGCTACATGCTTCTTGCCTCGTTCGCTTTCTGTGTGCTCACCGGTACGATCGGCT
TCTACGCCTGCTTCTGCTTCACAAGATTGATTTATTCTTCTGTGAAGATCGACTAGGCAT
GTTCCATGGGCCTGCAGCGAGTATGCCCAT