Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031958_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:208010858:208014853:1 gene:Zm00001d031958 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyrimidine-specific ribonucleoside hydrolase rihA

Sequence

ATGGGGCAGGACGGCCAGCAGATCCGCCGCGACAAGCTCATCATCGACACGGATCCCGGC
ATCGATGATAGCATGACGATCCTAATGGCGTTCAGAGCACCTAGTGTGGAAATCATTGGG
CTCACGACCATATTCGGCAACGTCGACACAAAGGGCGCAACACGTAACGCGCTATTGCTG
TGTGAGAGAGCAGGATGCCCTGAAGTTCCAGTAGCAGAGGGCAGCCATGAGCCCCTAAAG
GGAGGAAAGCCCCGTGTTGCTGATTTCGTTCATGGGTCAGATGGCATTGGGAATCTGTTT
CTTCCTGCACCCTCTGCTAAGAAGGTTGAGGAAAGTGCTGCTGATTTCCTGATTAATAAG
GTCTCTGAGTTTCCAGGAGAGGTCTCTGTGCTTGCGTTGGGACCCCTGACAAATGTAGCA
TTGGCCATCAAAAGAGACCCTTCCTTTGCAAGCAAGGTTAAGAAAATAGTTGTACTGGGT
GGAGCTTTCTTTGCGGCTGGAAATGTCAACCCTGCTGCTGAAGCAAATATCCATGGAGAC
CCAGAAGCAGCTGACATAGTTTTTACTTCAGGAGCAGATATCGTTGTGGTTGGCATTAAC
ATAACAACACAAGTCTGCCTGACAGATGAGGATCTCTTGGAGCTAAGAAACTCGAAAGGG
AAGCATGCAGCGTTCTTATATGAGATGTGCAAGTTCTACAGAGATTGGCATGCCAAGTCT
GATGGTTTTCATGGAATTTTCCTTCATGATCCTGTGAGCTTCACTGCCGTACTTCATCCA
GAGTACTTCACATTCAAGAAGGGTGTGGTGAGAGTAGAGACCCAGGGCATTTGCACTGGC
CACACTTTGATGGATCAGGGATTGAAAAAGTGGAATTCAGAGAACCCATGGTCAGGGTAT
AAACCGATTTCAGTTGCATGGACGGTTGATGTGCCAAAGGTCATCAGCTTTATAAAGAAG
CTGCTCATGGCACCATGA

Peptide Sequence

PEP ID

Zm00001d031958_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:208010858:208014853:1 gene:Zm00001d031958 transcript:Zm00001d031958_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyrimidine-specific ribonucleoside hydrolase rihA

Sequence

MGQDGQQIRRDKLIIDTDPGIDDSMTILMAFRAPSVEIIGLTTIFGNVDTKGATRNALLL
CERAGCPEVPVAEGSHEPLKGGKPRVADFVHGSDGIGNLFLPAPSAKKVEESAADFLINK
VSEFPGEVSVLALGPLTNVALAIKRDPSFASKVKKIVVLGGAFFAAGNVNPAAEANIHGD
PEAADIVFTSGADIVVVGINITTQVCLTDEDLLELRNSKGKHAAFLYEMCKFYRDWHAKS
DGFHGIFLHDPVSFTAVLHPEYFTFKKGVVRVETQGICTGHTLMDQGLKKWNSENPWSGY
KPISVAWTVDVPKVISFIKKLLMAP

Transcript Sequence

Transcript ID

Zm00001d031958_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:208010858:208014853:1 gene:Zm00001d031958 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyrimidine-specific ribonucleoside hydrolase rihA

Sequence

ACAGCCCACAAAGCATGCCCGGCGAGTTGGAAAAGCGCAGAATCTGCGAGACAAGAAAGC
AATAGGAAGGGAGAAACAGGGAGAGAGGTTGCGTCCCAGCCCCACCTGCCATCGCCTCTT
CTTCCGCTCCCTCGGCGGCTTTCCAAGATTCAGATTCAGATTGGGGGCCTTTTGCTGCTG
CGCGGCAATTCTCGTCGCTCCAGTCCCCACTTCACTGTTCCTGAGCGGGAGGCACCGGCC
GGACTCGCGATGGGGCAGGACGGCCAGCAGATCCGCCGCGACAAGCTCATCATCGACACG
GATCCCGGCATCGATGATAGCATGACGATCCTAATGGCGTTCAGAGCACCTAGTGTGGAA
ATCATTGGGCTCACGACCATATTCGGCAACGTCGACACAAAGGGCGCAACACGTAACGCG
CTATTGCTGTGTGAGAGAGCAGGATGCCCTGAAGTTCCAGTAGCAGAGGGCAGCCATGAG
CCCCTAAAGGGAGGAAAGCCCCGTGTTGCTGATTTCGTTCATGGGTCAGATGGCATTGGG
AATCTGTTTCTTCCTGCACCCTCTGCTAAGAAGGTTGAGGAAAGTGCTGCTGATTTCCTG
ATTAATAAGGTCTCTGAGTTTCCAGGAGAGGTCTCTGTGCTTGCGTTGGGACCCCTGACA
AATGTAGCATTGGCCATCAAAAGAGACCCTTCCTTTGCAAGCAAGGTTAAGAAAATAGTT
GTACTGGGTGGAGCTTTCTTTGCGGCTGGAAATGTCAACCCTGCTGCTGAAGCAAATATC
CATGGAGACCCAGAAGCAGCTGACATAGTTTTTACTTCAGGAGCAGATATCGTTGTGGTT
GGCATTAACATAACAACACAAGTCTGCCTGACAGATGAGGATCTCTTGGAGCTAAGAAAC
TCGAAAGGGAAGCATGCAGCGTTCTTATATGAGATGTGCAAGTTCTACAGAGATTGGCAT
GCCAAGTCTGATGGTTTTCATGGAATTTTCCTTCATGATCCTGTGAGCTTCACTGCCGTA
CTTCATCCAGAGTACTTCACATTCAAGAAGGGTGTGGTGAGAGTAGAGACCCAGGGCATT
TGCACTGGCCACACTTTGATGGATCAGGGATTGAAAAAGTGGAATTCAGAGAACCCATGG
TCAGGGTATAAACCGATTTCAGTTGCATGGACGGTTGATGTGCCAAAGGTCATCAGCTTT
ATAAAGAAGCTGCTCATGGCACCATGAGCAAAGTACAACCATTTAACGACGTGTCGACAT
CAGCGCTCTCTGATGTCCAAGAAAATTTGACGAGTACAGATGCTCTTTCTCAGTTGCACT
GTAATTAGTTCCTGGACCTAGGATGATTCCTATTCCTCCAATAGTAAGAGGAACCTTTCA
TTGTGAAAGGTCATGCAGCAGTCTCGAATACCATGAAGCAAATTCTGGCATACGACATCA
TGTCTCACACATTTGTATCAATACATTTCGAATCAATAAAGTTTCCCTCACTCTTTACTG
TGCACTTTTCTCAAAGATCACAATCTTGTTGTAATGTGCCTCTCATGTAAAGCAAAGTAC
CAATAAGGCATATGATAGTTTTGAT