Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031911_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:206533240:206537215:1 gene:Zm00001d031911 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein UPSTREAM OF FLC
Sequence	ATGGCTCCTCCAGCAGGGACAGGGGCAGGGACGGAGGGGAGGCCGGCGCGGCGGCGCGGC ACCGGCACCAGCCCCGGACGCACCAAGGTGTGGGTCGAGCCGCCGGGCAAGAGCCACGGC CACCACCACCACCAGGCTCCGCCGCCCCCGTCCCCGCCCAAGAGGGTGGCCGTGGTCTAC TACCTCTGCCGCAACCGCCACCTCGAGCACCCGCACTTCATCGAGGTGCCGCTCGCCGTA CCGGAGGAAGGCCTCTACCTTCGAGATGTGATGAACCGCCTCAACGTGCTGCGGGGGAAG GGCATGGCCTCCATGTATTCTTGGTCCTGCAAGAGGAGCTACAAGAACGGCTTCGTGTGG CACGACCTGTCCGACGACGACCTGGTGCTCCCCGCGCAGGGCAGCGAGTACATCCTCAAG GGCTCCGAGCTCCTCGACCGCTCGCCGCCGCCGCCGCCAGATCGGCAGCATGATGGCGGC GCTAGCAACCCGAATGTGGAGGAGAACCTCAAGCACCGCAAGGAAGAAGAGTCCCCGCAG TCTCGGGGCTCGCAGGAAGGGTGCTCGTCGTCGTCGTCTCCTTCCGCCTCCGCCGCTGGC AAGGAGATCTCGCCTCCGCCCGCCACTCCGCGGCCACAGCAGCAGGCGCAGTCGGCAGCC CTGCCGCCGCCGCCGTCGCCGTCGCCGGCTTCCACCAGCCGCGAGGACGACCCGTGCCGG ACCGCGCACTCAGGCTCGTCCGGCAACCAGTCCCCCGAACCCGCTGCGAGAAACGCTCCA CCGTCAGAGGCTAGCTCCCCAGGACCGTCGGAGTACAGAGTCTGCAGACCCGTCGGGGCT CAGGACGCGGCCACACAGACAGACGACAGCGAGAGGGACGCTGCTGAAAACCATAGTACT CGCGTGGCCGGAGCGTCCACCATGGACACGACGTCGGATGCCGAGATCCAGGAATGCCAC CGGAGGAGCTCGCCGCTGTCACCCAAGGTACCCGAGACCGTTCGTGAGTCACCGCCGGCC GTGTGCTCCTCCGATGCTGCTTCGCCTGGTGGCAGAGTCGAGACGTTGGAGTCCCTGATA AGAGCAGAGGCCAGCAGGAGGAGTAGCTTCAGGACATTGGAGGAGGGACACATGCTTGGC CCGGTGGGTGTCAAACTGAAGCCGGCCAACTTGCTGATGCAGCTTATCACGTGTGGGTTC GTGTCTGTGAAAGAACACCGAGGCTTCGGGTTCATCCCGACGTACAGGCCTCGGTTTACG CAGGTCGAGTTCCCTTCTCCGGTGTTCTCCACTCCCGTGGCGTTGCGGCACCTTGACAGA ATCCCTTGCAATACAAAAGCAACTGGGTCGACGAGAGCTCCGGAGCCGGAATGTTTCAGC GGGAGCTTGGTTGTTGAGACGAAGCAGCAGGACGAGCCCGGGAGAGGGATCGCCTCACTC AAACGCTCGTCATCTTACGACGAGGATAGAGTGTACAGAGCAGCACATCCCAAAAGCAAC ACGGAAAGCTCCTGTGAGGCAGGTAGTTTCAGGTGCCTCCCACAGACCATCAGGATCATA TCGTGTAAGCAGTCGAGGAGTGGAACAGTACTCTCCCCCCCTGCCTCTGACGTGAGAAAC GGCTCTATCCAACAAGAACACAGTACCATGTCCTCACCGCTGGGCTCATCGAAGAGCGCG AGCAACAGGATGGCCGATCCGTCGCCGCCGGGCAAACTGTCTTGTGCGAGAGCCGAGTCG TTGTTCCGCGAGGAGAAGGACATGATCAAGATCGAAGAAAGTTGA

Peptide Sequence

PEP ID	Zm00001d031911_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:206533240:206537215:1 gene:Zm00001d031911 transcript:Zm00001d031911_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein UPSTREAM OF FLC
Sequence	MAPPAGTGAGTEGRPARRRGTGTSPGRTKVWVEPPGKSHGHHHHQAPPPPSPPKRVAVVY YLCRNRHLEHPHFIEVPLAVPEEGLYLRDVMNRLNVLRGKGMASMYSWSCKRSYKNGFVW HDLSDDDLVLPAQGSEYILKGSELLDRSPPPPPDRQHDGGASNPNVEENLKHRKEEESPQ SRGSQEGCSSSSSPSASAAGKEISPPPATPRPQQQAQSAALPPPPSPSPASTSREDDPCR TAHSGSSGNQSPEPAARNAPPSEASSPGPSEYRVCRPVGAQDAATQTDDSERDAAENHST RVAGASTMDTTSDAEIQECHRRSSPLSPKVPETVRESPPAVCSSDAASPGGRVETLESLI RAEASRRSSFRTLEEGHMLGPVGVKLKPANLLMQLITCGFVSVKEHRGFGFIPTYRPRFT QVEFPSPVFSTPVALRHLDRIPCNTKATGSTRAPEPECFSGSLVVETKQQDEPGRGIASL KRSSSYDEDRVYRAAHPKSNTESSCEAGSFRCLPQTIRIISCKQSRSGTVLSPPASDVRN GSIQQEHSTMSSPLGSSKSASNRMADPSPPGKLSCARAESLFREEKDMIKIEES

Transcript Sequence

Transcript ID	Zm00001d031911_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:206533240:206537215:1 gene:Zm00001d031911 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein UPSTREAM OF FLC
Sequence	CACGTTTACGACCCCGTCGCGTCGTGCACCCACCAACACGCCACCGCTCCTCCTCCTCCT GCTACATTTACATTATTGGGGGCCTCTTCTCCATCCGCCACCTCTCGGCGCATCATCAGC TGTGCCTGTGAGCTCTCTCATTCACCGGCACCGCTGCTCTTGCTCTTGTGTTCGTAAGTA ACTTCGCATTGCCTTGCCCCGCCCCCTTGTCCTGCTCCCTCCGGAGCTCCCCGCCTGCTC CATTTAATTACTGACTGACTCATACCCTTCCCCGCATTCGCCTTCTTGTTTCTTCCATCC CACCCGTACCAGCCGCCGGTCCCCAATGCCCAGGCAGGCAGCCCAGCACGGTGTGGTGGT CTGATCCGCGGCGGCGCGCCCGTCGCTCCCTCCGCGAATGGCTCCTCCAGCAGGGACAGG GGCAGGGACGGAGGGGAGGCCGGCGCGGCGGCGCGGCACCGGCACCAGCCCCGGACGCAC CAAGGTGTGGGTCGAGCCGCCGGGCAAGAGCCACGGCCACCACCACCACCAGGCTCCGCC GCCCCCGTCCCCGCCCAAGAGGGTGGCCGTGGTCTACTACCTCTGCCGCAACCGCCACCT CGAGCACCCGCACTTCATCGAGGTGCCGCTCGCCGTACCGGAGGAAGGCCTCTACCTTCG AGATGTGATGAACCGCCTCAACGTGCTGCGGGGGAAGGGCATGGCCTCCATGTATTCTTG GTCCTGCAAGAGGAGCTACAAGAACGGCTTCGTGTGGCACGACCTGTCCGACGACGACCT GGTGCTCCCCGCGCAGGGCAGCGAGTACATCCTCAAGGGCTCCGAGCTCCTCGACCGCTC GCCGCCGCCGCCGCCAGATCGGCAGCATGATGGCGGCGCTAGCAACCCGAATGTGGAGGA GAACCTCAAGCACCGCAAGGAAGAAGAGTCCCCGCAGTCTCGGGGCTCGCAGGAAGGGTG CTCGTCGTCGTCGTCTCCTTCCGCCTCCGCCGCTGGCAAGGAGATCTCGCCTCCGCCCGC CACTCCGCGGCCACAGCAGCAGGCGCAGTCGGCAGCCCTGCCGCCGCCGCCGTCGCCGTC GCCGGCTTCCACCAGCCGCGAGGACGACCCGTGCCGGACCGCGCACTCAGGCTCGTCCGG CAACCAGTCCCCCGAACCCGCTGCGAGAAACGCTCCACCGTCAGAGGCTAGCTCCCCAGG ACCGTCGGAGTACAGAGTCTGCAGACCCGTCGGGGCTCAGGACGCGGCCACACAGACAGA CGACAGCGAGAGGGACGCTGCTGAAAACCATAGTACTCGCGTGGCCGGAGCGTCCACCAT GGACACGACGTCGGATGCCGAGATCCAGGAATGCCACCGGAGGAGCTCGCCGCTGTCACC CAAGGTACCCGAGACCGTTCGTGAGTCACCGCCGGCCGTGTGCTCCTCCGATGCTGCTTC GCCTGGTGGCAGAGTCGAGACGTTGGAGTCCCTGATAAGAGCAGAGGCCAGCAGGAGGAG TAGCTTCAGGACATTGGAGGAGGGACACATGCTTGGCCCGGTGGGTGTCAAACTGAAGCC GGCCAACTTGCTGATGCAGCTTATCACGTGTGGGTTCGTGTCTGTGAAAGAACACCGAGG CTTCGGGTTCATCCCGACGTACAGGCCTCGGTTTACGCAGGTCGAGTTCCCTTCTCCGGT GTTCTCCACTCCCGTGGCGTTGCGGCACCTTGACAGAATCCCTTGCAATACAAAAGCAAC TGGGTCGACGAGAGCTCCGGAGCCGGAATGTTTCAGCGGGAGCTTGGTTGTTGAGACGAA GCAGCAGGACGAGCCCGGGAGAGGGATCGCCTCACTCAAACGCTCGTCATCTTACGACGA GGATAGAGTGTACAGAGCAGCACATCCCAAAAGCAACACGGAAAGCTCCTGTGAGGCAGG TAGTTTCAGGTGCCTCCCACAGACCATCAGGATCATATCGTGTAAGCAGTCGAGGAGTGG AACAGTACTCTCCCCCCCTGCCTCTGACGTGAGAAACGGCTCTATCCAACAAGAACACAG TACCATGTCCTCACCGCTGGGCTCATCGAAGAGCGCGAGCAACAGGATGGCCGATCCGTC GCCGCCGGGCAAACTGTCTTGTGCGAGAGCCGAGTCGTTGTTCCGCGAGGAGAAGGACAT GATCAAGATCGAAGAAAGTTGAGTTGCCTCTCACTGTCTCTCTCATATGCATCCATCATC TCCGTCTGCTGGTGTTTGTCTCTAGATACTGACAAAAAAAACACCGCTCTTAAAAAAAAA ACTGCAGGCTTCCTTCTGGAGCTCGGGTCATAATCCAGTCCGCGCCGTTGTGTGAAGAAG AAAGCGACGACAGCAGCGAATGAATCACATTGTAAGGGTCCGTGTTACATATGTTTTTGT TTTCTTTTGTTCTTTTTTTTTCATTTCGTTTTGCTGAGGATGATGGCATCTGCGTGCGTA GCTTTTGGAGTAGAGGGTTCAAAGGTATTGATTGATTCTGTAAACCGTGTGAATGTGATA GTCCGGGCGTTTTCTCACACCTCGAAGAAGAGAATAGTTTGCCTTTGCTTATTTTTTTTT TTATAAAAAAGGGGCCCGCTTTTGTGTATCTTAGGCATACAGTTTTACTTGCTTTGTTTT TCTTCAAGTAAATAAGCATGGATTGTTTTTCTT