Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031893_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:205617823:205620362:1 gene:Zm00001d031893 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hydroxycinnamoyltransferase12 description: hydroxycinnamoyltransferase12
Sequence

ATGGCCGTGGAGAACGGCAGCGCCGACGAGGCGGCGGCGGTGACCGTGACCGTGACCGGC
GCCCGCACCGTGGCGCCGGCCAAGAACCGCTGCACGCTCGCCACCTTCGACCTCCCCTAC
ATCACCTTCTACTACAACCAGAAGCTGCTCCTGTACCGCGCCGCCCCCGACTTCCCGGAC
GCCGTGGCGCGCATGACGGCCGCGCTCGCCGACGCGCTCCGCGTCTTCTACCCGCTCGCC
GGCCGCATCCGCCAGGACGACGGCGGCGCGCTGGCAGTCGAGGGCGACGAGGGCGCCGAG
GTCTTCGAGGCCGAGGCCCAGGGCGTCGCCGTCGACGACCTCGCCGGAGGGGACTGCAGC
GACGAGGCGGAGAAGGTCTTGCAGCACCTCGTGCCCTACACCGGCGTCATGAACCTCGAG
GGCCTCCGCCGCCCGCTTCTCGCCGTCCAATTCACAAAGCTCAAGGACGGTCTGGCGGTG
GGGTGCGCCTTCAACCACGCGGTGCTGGACGGCACCTCCACGTGGCACTTCATGTCCTCC
TGGGCCGAGCTCTGCCGCGGCGTACCCCTGTCGCTGCAGCCCATCCACGACCGGTCCCTG
TCCCGCTCCGTGCGCGTGCGGCTGGAGCTGCCGGCGTCCGCCGAGGCCCACGAGAAGACG
GACCCGAACGGGCCGAAGAAGGCGCTGGTGGCCCGCGTCTTCTCGTTCCCGGAGCCCACC
GTGGCGCGCATCAAGGCCGCGGCCAACGCGGCGCTGCCGCCGGGCGCAAAGCCCTTCTCA
ACGTTCCAGTCCCTGGGGGCGCACATCTGGCGCGCCGTCTCCCGCGCCCGGGGCCTCGGC
CCCGCCGACATCACCGCCTTCGCCGTCTTCGCCGACTGCCGCGCCCGCCTCGACCCGCCC
CTCCCGCCGGCCTACTTCGGCAACCTCATCCAGGCGGTGTTCACGGGCGTGCCCGCGGGG
ATGCTCCTGGGCGGGCCCCCCGAGCTGCCCGCGGGCCTGCTGCAGAAGGCCATCGACGAG
CACGACGCCGCCGCGGTCACCAGGAGGCTGGAGGAGTACGAGGCGGCGCCCAAGCTGTTC
CACTACAGCGACGCCGGCCCCAACTGCGTGGCCGTCGGCAGCTCGCCGCGCTTCAGGGTC
TACGACGTCGACTTCGGCTTCGGACGGCCCGAGCGCGTCCGCAGCGGCGGGAACAACAAG
TTCGACGGCATGGTGTACCTGTACCCCGGCCGCGGCGGTGACGGCGGCATCGACGTCGAG
CTGGCGCTGCAGCCGGAGCCCATGCAGAGGCTGGAGAAGGACGACGACTTCTTCCTGCGC
CAGGCGGCAGCCTAA

Peptide Sequence

PEP ID

Zm00001d031893_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:205617823:205620362:1 gene:Zm00001d031893 transcript:Zm00001d031893_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hydroxycinnamoyltransferase12 description: hydroxycinnamoyltransferase12
Sequence

MAVENGSADEAAAVTVTVTGARTVAPAKNRCTLATFDLPYITFYYNQKLLLYRAAPDFPD
AVARMTAALADALRVFYPLAGRIRQDDGGALAVEGDEGAEVFEAEAQGVAVDDLAGGDCS
DEAEKVLQHLVPYTGVMNLEGLRRPLLAVQFTKLKDGLAVGCAFNHAVLDGTSTWHFMSS
WAELCRGVPLSLQPIHDRSLSRSVRVRLELPASAEAHEKTDPNGPKKALVARVFSFPEPT
VARIKAAANAALPPGAKPFSTFQSLGAHIWRAVSRARGLGPADITAFAVFADCRARLDPP
LPPAYFGNLIQAVFTGVPAGMLLGGPPELPAGLLQKAIDEHDAAAVTRRLEEYEAAPKLF
HYSDAGPNCVAVGSSPRFRVYDVDFGFGRPERVRSGGNNKFDGMVYLYPGRGGDGGIDVE
LALQPEPMQRLEKDDDFFLRQAAA

Transcript Sequence

Transcript ID

Zm00001d031893_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:205617823:205620362:1 gene:Zm00001d031893 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hydroxycinnamoyltransferase12 description: hydroxycinnamoyltransferase12
Sequence

AACCGAACCATCTACCACCTCCATCGCTTTTCTCCACCTCCAAGGCTCCAATTCAATTCC
ATCGCGCTGTCGTCTTCGTTGCCCGGTCGCCATTTTTTCCTCCTGATTTCTTCTTTTTCT
TCCCTCACTATATGGTCAGGCCTCTGCCTGTCCCTCTCGTGTCGTGCCGTTGTGCGGTGC
TCGATCCTGCCCGTCGCCTCTCCGGCCACCGCTGAGAAGATCCACCATTAAATGCCTGAT
CCACCCACCTCCTCCTCCTGGCTTCCCTATATCACTCACCCATCCACCTCGCTTCGACCT
CACCTCACAGACTCCTCACACTTAGTACTGTTAGCCAGGAACAAGCCCCAGCAGCAGCAG
CAGCAATGGCCGTGGAGAACGGCAGCGCCGACGAGGCGGCGGCGGTGACCGTGACCGTGA
CCGGCGCCCGCACCGTGGCGCCGGCCAAGAACCGCTGCACGCTCGCCACCTTCGACCTCC
CCTACATCACCTTCTACTACAACCAGAAGCTGCTCCTGTACCGCGCCGCCCCCGACTTCC
CGGACGCCGTGGCGCGCATGACGGCCGCGCTCGCCGACGCGCTCCGCGTCTTCTACCCGC
TCGCCGGCCGCATCCGCCAGGACGACGGCGGCGCGCTGGCAGTCGAGGGCGACGAGGGCG
CCGAGGTCTTCGAGGCCGAGGCCCAGGGCGTCGCCGTCGACGACCTCGCCGGAGGGGACT
GCAGCGACGAGGCGGAGAAGGTCTTGCAGCACCTCGTGCCCTACACCGGCGTCATGAACC
TCGAGGGCCTCCGCCGCCCGCTTCTCGCCGTCCAATTCACAAAGCTCAAGGACGGTCTGG
CGGTGGGGTGCGCCTTCAACCACGCGGTGCTGGACGGCACCTCCACGTGGCACTTCATGT
CCTCCTGGGCCGAGCTCTGCCGCGGCGTACCCCTGTCGCTGCAGCCCATCCACGACCGGT
CCCTGTCCCGCTCCGTGCGCGTGCGGCTGGAGCTGCCGGCGTCCGCCGAGGCCCACGAGA
AGACGGACCCGAACGGGCCGAAGAAGGCGCTGGTGGCCCGCGTCTTCTCGTTCCCGGAGC
CCACCGTGGCGCGCATCAAGGCCGCGGCCAACGCGGCGCTGCCGCCGGGCGCAAAGCCCT
TCTCAACGTTCCAGTCCCTGGGGGCGCACATCTGGCGCGCCGTCTCCCGCGCCCGGGGCC
TCGGCCCCGCCGACATCACCGCCTTCGCCGTCTTCGCCGACTGCCGCGCCCGCCTCGACC
CGCCCCTCCCGCCGGCCTACTTCGGCAACCTCATCCAGGCGGTGTTCACGGGCGTGCCCG
CGGGGATGCTCCTGGGCGGGCCCCCCGAGCTGCCCGCGGGCCTGCTGCAGAAGGCCATCG
ACGAGCACGACGCCGCCGCGGTCACCAGGAGGCTGGAGGAGTACGAGGCGGCGCCCAAGC
TGTTCCACTACAGCGACGCCGGCCCCAACTGCGTGGCCGTCGGCAGCTCGCCGCGCTTCA
GGGTCTACGACGTCGACTTCGGCTTCGGACGGCCCGAGCGCGTCCGCAGCGGCGGGAACA
ACAAGTTCGACGGCATGGTGTACCTGTACCCCGGCCGCGGCGGTGACGGCGGCATCGACG
TCGAGCTGGCGCTGCAGCCGGAGCCCATGCAGAGGCTGGAGAAGGACGACGACTTCTTCC
TGCGCCAGGCGGCAGCCTAAGCCCGAGTCGTCGATCGTCGTGTCAGTGTCCACTGTCCAC
CCATCCAGTTCGTTGATCGTGCTTTATTTTAGTAGTAAGTATTGTGTACGTTCCTGCTTG
CTATATTATTATTATACTAGTGTTTTGCTTTGTTCCTTGATTAATTGTACGAGCTAGGCG
TGCGTGTTGGATTACACTGTATTTGCTGGACTGGAGCTGAATAAGGATGGACCAGACTTC
GATTAGTTTGTGCAAGCTCACGAGTGATCGAGCATGGTCCCTATATATGTCATCACTCGT
TGTAGTAATGCAGTAATGTACTCATTATATTGTTATGCATGTACTTCCACTTGTACCATA
CCATGGAATCGAACCAATCAACCAATGCAAGAATTTAGAATCTACGTGCAA