Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031871_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:204748432:204755635:-1 gene:Zm00001d031871 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brachytic2 description: brachytic2
Sequence	ATGTCTAGCAGCGACCCGGAGGAGATCAGGGCGCGCGTCGTCGTTCTCGGTTCGCCCCAT GCCGACGGCGGCGACGAGTGGGCCCGGCCCGAGCTCGAGGCCTTCCATCTGCCGTCTCCC GCCCACCAGCCTCCTGGCTTCCTAGCCGGGCAACCGGAAGCAGCAGAGCAACCCACGCTC CCTGCTCCTGCTGGCCGCAGCAGCAGCAGCAGCAACACGCCTACTACATCTGCCGGTGGC GGCGCTGCTCCTCCTCCTCCTTCTTCGCCTCCCCCTCCGCCGGCTTCTCTGGAGACCGAG CAGCCGCCCAATGCCAGGCCAGCCTCCGCCGGCGCCAATGACAGCAAGAAGCCCACCCCG CCCGCCGCCCTGCGCGACCTCTTCCGCTTCGCCGACGGCCTCGACTGCGCGCTCATGCTC ATCGGCACCCTCGGCGCGCTCGTCCACGGCTGCTCGCTCCCCGTCTTCCTCCGCTTCTTC GCCGACCTCGTCGACTCCTTCGGCTCCCACGCCGACGACCCGGACACCATGGTCCGCCTC GTCGTCAAGTACGCCTTCTACTTCCTCGTCGTCGGAGCGGCAATCTGGGCATCCTCGTGG GCAGAGATCTCTTGCTGGATGTGGACCGGCGAGCGGCAGTCGACGCGGATGCGGATCCGG TACCTGGACGCGGCGCTGCGGCAGGACGTGTCCTTCTTCGACACCGACGTGCGGGCCTCG GACGTGATCTACGCCATCAACGCGGACGCCGTGGTGGTGCAGGACGCCATCAGCGAGAAG CTGGGCAACCTCATCCACTACATGGCCACCTTCGTGGCCGGCTTCGTCGTGGGGTTCACG GCCGCGTGGCAGCTGGCGCTGGTCACGCTGGCCGTGGTGCCGCTCATCGCCGTCATCGGC GGGCTGAGCGCCGCCGCGCTCGCCAAGCTCTCGTCCCGCAGCCAGGACGCGCTCTCGGGC GCCAGCGGCATCGCGGAGCAGGCGCTCGCGCAGATACGGATCGTGCAGGCGTTCGTTGGC GAGGAGCGCGAGATGCGGGCCTACTCGGCGGCGCTGGCCGTGGCGCAGAGGATCGGCTAC CGCAGCGGCTTCGCCAAGGGGCTCGGCCTCGGCGGCACCTACTTCACCGTCTTCTGCTGC TACGGGCTCCTGCTCTGGTACGGCGGCCACCTCGTGCGCGCCCAGCACACCAACGGCGGG CTCGCCATCGCCACCATGTTCTCCGTCATGATCGGCGGACTGGCCCTCGGGCAGTCGGCG CCGAGCATGGCCGCGTTCGCCAAGGCGCGTGTGGCGGCTGCCAAGATCTTCCGCATCATC GACCACAGGCCGGGCATCTCCTCGCGCGACGGCGCGGAGCCAGAGTCGGTGACGGGGCGG GTGGAGATGCGGGGCGTGGACTTCGCGTACCCGTCGCGGCCGGACGTCCCCATCCTGCGC GGCTTCTCGCTGAGCGTGCCCGCCGGGAAGACCATCGCGCTGGTGGGCAGCTCCGGCTCC GGGAAGAGCACGGTGGTGTCGCTCATCGAGAGATTCTACGACCCCAGCGCAGGGCAAATC CTGCTGGACGGGCACGACCTCAGGTCGCTGGAGCTGCGGTGGCTGCGGCGGCAGATCGGG CTGGTGAGCCAGGAGCCGGCGCTGTTCGCGACGAGCATCAGGGAGAACCTGCTGCTGGGG CGGGACAGCCAGAGCGCGACGCTGGCGGAGATGGAGGAGGCGGCCAGGGTGGCCAACGCC CACTCCTTCATCATCAAACTCCCCGACGGCTACGACACGCAGGTTGGGGAGCGCGGCCTG CAGCTCTCCGGTGGGCAGAAGCAGCGCATCGCCATCGCCCGCGCCATGCTCAAGAACCCC GCCATCCTGCTGCTGGACGAGGCCACCAGCGCGCTGGACTCCGAGTCTGAGAAGCTCGTG CAGGAGGCGCTGGACCGCTTCATGATCGGGCGCACCACCCTGGTGATCGCGCACAGGCTG TCCACCATCCGCAAGGCCGACGTGGTGGCCGTGCTGCAGGGCGGCGCCGTCTCCGAGATG GGCGCGCACGACGAGCTGATGGCCAAGGGCGAGAACGGCACCTACGCCAAGCTCATCCGC ATGCAGGAGCAGGCGCACGAGGCGGCGCTCGTCAACGCCCGCCGCAGCAGCGCCAGGCCC TCCAGCGCCCGCAACTCCGTCAGCTCGCCCATCATGACGCGCAACTCCTCCTACGGCCGC TCCCCCTACTCCCGCCGCCTCTCCGACTTCTCCACCTCCGACTTCACCCTCTCCATCCAC GACCCGCACCACCACCACCGGACCATGGCGGACAAGCAGCTGGCGTTCCGCGCCGGCGCC AGCTCCTTCCTGCGCCTCGCCAGGATGAACTCGCCCGAGTGGGCCTACGCGCTCGCCGGC TCCATCGGCTCCATGGTCTGCGGCTCCTTCAGCGCCATCTTCGCCTACATCCTCAGCGCC GTGCTCAGCGTCTACTACGCGCCGGACCCGCGGTACATGAAGCGCGAGATCGCAAAATAC TGCTACCTGCTCATCGGCATGTCCTCCGCGGCGCTGCTGTTCAACACGGTGCAGCACGTG TTCTGGGACACGGTGGGCGAGAACCTGACCAAGCGGGTGCGCGAGAAGATGTTCGCCGCC GTGCTCCGCAACGAGATCGCCTGGTTCGACGCGGACGAGAACGCCAGCGCGCGCGTGGCC GCCAGGCTAGCGCTGGACGCCCAGAACGTGCGCTCCGCCATCGGGGACCGCATCTCCGTC ATCGTCCAGAACTCGGCGCTGATGCTGGTGGCCTGCACCGCGGGGTTCGTCCTCCAGTGG CGCCTCGCGCTCGTGCTCCTCGCCGTGTTCCCGCTCGTCGTGGGCGCCACCGTGCTGCAG AAGATGTTCATGAAGGGCTTCTCGGGGGACCTGGAGGCCGCGCACGCCAGGGCCACGCAG ATCGCGGGCGAGGCCGTGGCCAACCTGCGCACCGTGGCCGCGTTCAACGCGGAGCGCAAG ATCACGGGGCTGTTCGAGGCCAACCTGCGCGGCCCGCTCCGGCGCTGCTTCTGGAAGGGG CAGATCGCCGGCAGCGGCTACGGCGTGGCGCAGTTCCTGCTGTACGCGTCCTACGCGCTG GGGCTGTGGTACGCGGCGTGGCTGGTGAAGCACGGCGTGTCCGACTTCTCGCGCACCATC CGCGTGTTCATGGTGCTGATGGTGTCCGCGAACGGCGCCGCCGAGACGCTGACGCTGGCG CCGGACTTCATCAAGGGCGGGCGCGCGATGCGGTCGGTGTTCGAGACGATCGACCGCAAG ACGGAGGTGGAGCCCGACGACGTGGACGCGGCGCCGGTGCCGGAGCGGCCGAGGGGCGAG GTGGAGCTGAAGCACGTGGACTTCTCGTACCCGTCGCGGCCGGACATCCAGGTGTTCCGC GACCTGAGCCTCCGTGCGCGCGCCGGGAAGACGCTGGCGCTGGTGGGGCCGAGCGGGTGC GGCAAGAGCTCGGTGCTGGCTCTGGTGCAGCGGTTCTACGAGCCCACGTCCGGGCGCGTG CTCCTGGACGGCAAGGACGTGCGCAAGTACAACCTGCGGGCGCTGCGGCGCGTGGTGGCG GTGGTACCGCAGGAGCCGTTCCTGTTCGCGGCGAGCATCCACGAGAACATCGCGTACGGG CGCGAGGGCGCGACGGAGGCGGAGGTGGTGGAGGCGGCGGCGCAGGCGAACGCGCACCGG TTCATCGCGGCGCTGCCGGAGGGGTACCGGACGCAGGTGGGCGAGCGCGGGGTGCAGCTG TCGGGGGGGCAGCGGCAGCGGATCGCGATCGCGCGCGCGCTGGTGAAGCAGGCGGCCATC GTGCTGCTGGACGAGGCGACCAGCGCGCTGGACGCCGAGTCGGAGCGGTGCGTGCAGGAG GCGCTGGAGCGCGCGGGGTCCGGGCGCACCACCATCGTGGTGGCGCACCGGCTGGCCACG GTGCGCGGCGCGCACACCATCGCGGTCATCGACGACGGCAAGGTGGCGGAGCAGGGGTCG CACTCGCACCTGCTCAAGCACCATCCCGACGGGTGCTACGCGCGGATGCTGCAGCTGCAG CGGCTGACGGGCGCGGCGGCCGGGCCCGGGCCGTCGACCTCGTGCAACGGGGCCGCGTAG

Peptide Sequence

PEP ID	Zm00001d031871_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:204748432:204755635:-1 gene:Zm00001d031871 transcript:Zm00001d031871_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brachytic2 description: brachytic2
Sequence	MSSSDPEEIRARVVVLGSPHADGGDEWARPELEAFHLPSPAHQPPGFLAGQPEAAEQPTL PAPAGRSSSSSNTPTTSAGGGAAPPPPSSPPPPPASLETEQPPNARPASAGANDSKKPTP PAALRDLFRFADGLDCALMLIGTLGALVHGCSLPVFLRFFADLVDSFGSHADDPDTMVRL VVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIRYLDAALRQDVSFFDTDVRAS DVIYAINADAVVVQDAISEKLGNLIHYMATFVAGFVVGFTAAWQLALVTLAVVPLIAVIG GLSAAALAKLSSRSQDALSGASGIAEQALAQIRIVQAFVGEEREMRAYSAALAVAQRIGY RSGFAKGLGLGGTYFTVFCCYGLLLWYGGHLVRAQHTNGGLAIATMFSVMIGGLALGQSA PSMAAFAKARVAAAKIFRIIDHRPGISSRDGAEPESVTGRVEMRGVDFAYPSRPDVPILR GFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPSAGQILLDGHDLRSLELRWLRRQIG LVSQEPALFATSIRENLLLGRDSQSATLAEMEEAARVANAHSFIIKLPDGYDTQVGERGL QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRL STIRKADVVAVLQGGAVSEMGAHDELMAKGENGTYAKLIRMQEQAHEAALVNARRSSARP SSARNSVSSPIMTRNSSYGRSPYSRRLSDFSTSDFTLSIHDPHHHHRTMADKQLAFRAGA SSFLRLARMNSPEWAYALAGSIGSMVCGSFSAIFAYILSAVLSVYYAPDPRYMKREIAKY CYLLIGMSSAALLFNTVQHVFWDTVGENLTKRVREKMFAAVLRNEIAWFDADENASARVA ARLALDAQNVRSAIGDRISVIVQNSALMLVACTAGFVLQWRLALVLLAVFPLVVGATVLQ KMFMKGFSGDLEAAHARATQIAGEAVANLRTVAAFNAERKITGLFEANLRGPLRRCFWKG QIAGSGYGVAQFLLYASYALGLWYAAWLVKHGVSDFSRTIRVFMVLMVSANGAAETLTLA PDFIKGGRAMRSVFETIDRKTEVEPDDVDAAPVPERPRGEVELKHVDFSYPSRPDIQVFR DLSLRARAGKTLALVGPSGCGKSSVLALVQRFYEPTSGRVLLDGKDVRKYNLRALRRVVA VVPQEPFLFAASIHENIAYGREGATEAEVVEAAAQANAHRFIAALPEGYRTQVGERGVQL SGGQRQRIAIARALVKQAAIVLLDEATSALDAESERCVQEALERAGSGRTTIVVAHRLAT VRGAHTIAVIDDGKVAEQGSHSHLLKHHPDGCYARMLQLQRLTGAAAGPGPSTSCNGAA

Transcript Sequence

Transcript ID	Zm00001d031871_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:204748432:204755635:-1 gene:Zm00001d031871 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brachytic2 description: brachytic2
Sequence	GGAGGAGCGAGCGAGCCTGACGGTCTCACACACACAGTCACACTCCCAAGCCAATTATTA TAAGAGGCGAGATGAGCAACTCCAGCTCTTAACCAATCCACTCCTCCTCCCTCTCCACCT CCTCTGCTTTGCTCTGCCACTCTGCTGAGGTGGGGGGCAGAGGAGCTCCCCCTCCCTCCT CTCCCCTCCTCGCCATGTCTAGCAGCGACCCGGAGGAGATCAGGGCGCGCGTCGTCGTTC TCGGTTCGCCCCATGCCGACGGCGGCGACGAGTGGGCCCGGCCCGAGCTCGAGGCCTTCC ATCTGCCGTCTCCCGCCCACCAGCCTCCTGGCTTCCTAGCCGGGCAACCGGAAGCAGCAG AGCAACCCACGCTCCCTGCTCCTGCTGGCCGCAGCAGCAGCAGCAGCAACACGCCTACTA CATCTGCCGGTGGCGGCGCTGCTCCTCCTCCTCCTTCTTCGCCTCCCCCTCCGCCGGCTT CTCTGGAGACCGAGCAGCCGCCCAATGCCAGGCCAGCCTCCGCCGGCGCCAATGACAGCA AGAAGCCCACCCCGCCCGCCGCCCTGCGCGACCTCTTCCGCTTCGCCGACGGCCTCGACT GCGCGCTCATGCTCATCGGCACCCTCGGCGCGCTCGTCCACGGCTGCTCGCTCCCCGTCT TCCTCCGCTTCTTCGCCGACCTCGTCGACTCCTTCGGCTCCCACGCCGACGACCCGGACA CCATGGTCCGCCTCGTCGTCAAGTACGCCTTCTACTTCCTCGTCGTCGGAGCGGCAATCT GGGCATCCTCGTGGGCAGAGATCTCTTGCTGGATGTGGACCGGCGAGCGGCAGTCGACGC GGATGCGGATCCGGTACCTGGACGCGGCGCTGCGGCAGGACGTGTCCTTCTTCGACACCG ACGTGCGGGCCTCGGACGTGATCTACGCCATCAACGCGGACGCCGTGGTGGTGCAGGACG CCATCAGCGAGAAGCTGGGCAACCTCATCCACTACATGGCCACCTTCGTGGCCGGCTTCG TCGTGGGGTTCACGGCCGCGTGGCAGCTGGCGCTGGTCACGCTGGCCGTGGTGCCGCTCA TCGCCGTCATCGGCGGGCTGAGCGCCGCCGCGCTCGCCAAGCTCTCGTCCCGCAGCCAGG ACGCGCTCTCGGGCGCCAGCGGCATCGCGGAGCAGGCGCTCGCGCAGATACGGATCGTGC AGGCGTTCGTTGGCGAGGAGCGCGAGATGCGGGCCTACTCGGCGGCGCTGGCCGTGGCGC AGAGGATCGGCTACCGCAGCGGCTTCGCCAAGGGGCTCGGCCTCGGCGGCACCTACTTCA CCGTCTTCTGCTGCTACGGGCTCCTGCTCTGGTACGGCGGCCACCTCGTGCGCGCCCAGC ACACCAACGGCGGGCTCGCCATCGCCACCATGTTCTCCGTCATGATCGGCGGACTGGCCC TCGGGCAGTCGGCGCCGAGCATGGCCGCGTTCGCCAAGGCGCGTGTGGCGGCTGCCAAGA TCTTCCGCATCATCGACCACAGGCCGGGCATCTCCTCGCGCGACGGCGCGGAGCCAGAGT CGGTGACGGGGCGGGTGGAGATGCGGGGCGTGGACTTCGCGTACCCGTCGCGGCCGGACG TCCCCATCCTGCGCGGCTTCTCGCTGAGCGTGCCCGCCGGGAAGACCATCGCGCTGGTGG GCAGCTCCGGCTCCGGGAAGAGCACGGTGGTGTCGCTCATCGAGAGATTCTACGACCCCA GCGCAGGGCAAATCCTGCTGGACGGGCACGACCTCAGGTCGCTGGAGCTGCGGTGGCTGC GGCGGCAGATCGGGCTGGTGAGCCAGGAGCCGGCGCTGTTCGCGACGAGCATCAGGGAGA ACCTGCTGCTGGGGCGGGACAGCCAGAGCGCGACGCTGGCGGAGATGGAGGAGGCGGCCA GGGTGGCCAACGCCCACTCCTTCATCATCAAACTCCCCGACGGCTACGACACGCAGGTTG GGGAGCGCGGCCTGCAGCTCTCCGGTGGGCAGAAGCAGCGCATCGCCATCGCCCGCGCCA TGCTCAAGAACCCCGCCATCCTGCTGCTGGACGAGGCCACCAGCGCGCTGGACTCCGAGT CTGAGAAGCTCGTGCAGGAGGCGCTGGACCGCTTCATGATCGGGCGCACCACCCTGGTGA TCGCGCACAGGCTGTCCACCATCCGCAAGGCCGACGTGGTGGCCGTGCTGCAGGGCGGCG CCGTCTCCGAGATGGGCGCGCACGACGAGCTGATGGCCAAGGGCGAGAACGGCACCTACG CCAAGCTCATCCGCATGCAGGAGCAGGCGCACGAGGCGGCGCTCGTCAACGCCCGCCGCA GCAGCGCCAGGCCCTCCAGCGCCCGCAACTCCGTCAGCTCGCCCATCATGACGCGCAACT CCTCCTACGGCCGCTCCCCCTACTCCCGCCGCCTCTCCGACTTCTCCACCTCCGACTTCA CCCTCTCCATCCACGACCCGCACCACCACCACCGGACCATGGCGGACAAGCAGCTGGCGT TCCGCGCCGGCGCCAGCTCCTTCCTGCGCCTCGCCAGGATGAACTCGCCCGAGTGGGCCT ACGCGCTCGCCGGCTCCATCGGCTCCATGGTCTGCGGCTCCTTCAGCGCCATCTTCGCCT ACATCCTCAGCGCCGTGCTCAGCGTCTACTACGCGCCGGACCCGCGGTACATGAAGCGCG AGATCGCAAAATACTGCTACCTGCTCATCGGCATGTCCTCCGCGGCGCTGCTGTTCAACA CGGTGCAGCACGTGTTCTGGGACACGGTGGGCGAGAACCTGACCAAGCGGGTGCGCGAGA AGATGTTCGCCGCCGTGCTCCGCAACGAGATCGCCTGGTTCGACGCGGACGAGAACGCCA GCGCGCGCGTGGCCGCCAGGCTAGCGCTGGACGCCCAGAACGTGCGCTCCGCCATCGGGG ACCGCATCTCCGTCATCGTCCAGAACTCGGCGCTGATGCTGGTGGCCTGCACCGCGGGGT TCGTCCTCCAGTGGCGCCTCGCGCTCGTGCTCCTCGCCGTGTTCCCGCTCGTCGTGGGCG CCACCGTGCTGCAGAAGATGTTCATGAAGGGCTTCTCGGGGGACCTGGAGGCCGCGCACG CCAGGGCCACGCAGATCGCGGGCGAGGCCGTGGCCAACCTGCGCACCGTGGCCGCGTTCA ACGCGGAGCGCAAGATCACGGGGCTGTTCGAGGCCAACCTGCGCGGCCCGCTCCGGCGCT GCTTCTGGAAGGGGCAGATCGCCGGCAGCGGCTACGGCGTGGCGCAGTTCCTGCTGTACG CGTCCTACGCGCTGGGGCTGTGGTACGCGGCGTGGCTGGTGAAGCACGGCGTGTCCGACT TCTCGCGCACCATCCGCGTGTTCATGGTGCTGATGGTGTCCGCGAACGGCGCCGCCGAGA CGCTGACGCTGGCGCCGGACTTCATCAAGGGCGGGCGCGCGATGCGGTCGGTGTTCGAGA CGATCGACCGCAAGACGGAGGTGGAGCCCGACGACGTGGACGCGGCGCCGGTGCCGGAGC GGCCGAGGGGCGAGGTGGAGCTGAAGCACGTGGACTTCTCGTACCCGTCGCGGCCGGACA TCCAGGTGTTCCGCGACCTGAGCCTCCGTGCGCGCGCCGGGAAGACGCTGGCGCTGGTGG GGCCGAGCGGGTGCGGCAAGAGCTCGGTGCTGGCTCTGGTGCAGCGGTTCTACGAGCCCA CGTCCGGGCGCGTGCTCCTGGACGGCAAGGACGTGCGCAAGTACAACCTGCGGGCGCTGC GGCGCGTGGTGGCGGTGGTACCGCAGGAGCCGTTCCTGTTCGCGGCGAGCATCCACGAGA ACATCGCGTACGGGCGCGAGGGCGCGACGGAGGCGGAGGTGGTGGAGGCGGCGGCGCAGG CGAACGCGCACCGGTTCATCGCGGCGCTGCCGGAGGGGTACCGGACGCAGGTGGGCGAGC GCGGGGTGCAGCTGTCGGGGGGGCAGCGGCAGCGGATCGCGATCGCGCGCGCGCTGGTGA AGCAGGCGGCCATCGTGCTGCTGGACGAGGCGACCAGCGCGCTGGACGCCGAGTCGGAGC GGTGCGTGCAGGAGGCGCTGGAGCGCGCGGGGTCCGGGCGCACCACCATCGTGGTGGCGC ACCGGCTGGCCACGGTGCGCGGCGCGCACACCATCGCGGTCATCGACGACGGCAAGGTGG CGGAGCAGGGGTCGCACTCGCACCTGCTCAAGCACCATCCCGACGGGTGCTACGCGCGGA TGCTGCAGCTGCAGCGGCTGACGGGCGCGGCGGCCGGGCCCGGGCCGTCGACCTCGTGCA ACGGGGCCGCGTAGGACGGAATGGATGGATGGATGGGTTTGGTTCCTCGAGAGATTGATG GGTGAGGAAGCTGAAGCTCCGGATCAAATGGTGGTACTCCATGATCGCAACAATGAGGGG AAAAAAAGAAAGGAGAAAATACGGTGGTTCATATGATTGTACAATTTGACGATCTGTTTG AGTCGGGGTTTTAGGATGATGTAAACCTTCACTCGCCTTTTTTTTACTCTTGTTTCTCAT CCGCATCAGTATCATCTATCTACATACAGTGTCAGAGATGGGAACTGATCCGCATCATCA TCTACCTCCCAAGGCACCCCAGATTGTATTAATGTACTTAGTTAGCCTGTTTTATATATA CTTATAAGTAC