Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031860_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:1:204434031:204438702:1 gene:Zm00001d031860 gene_biotype:protein_coding transcript_biotype:protein_coding description:7-hydroxymethyl chlorophyll a reductase chloroplastic
Sequence	ATGGCCTCCAGCACCTCCCTCTCCCTTTGCTTGCACGCCTCGTCGCCCTCGTCCTCGTCT CCTGGACTCCGCCGACCCTCCCTCGCCTCCTCCTCGTCCTCCAGGTCCGAGAGAACGCGC AAGATCAGGGCCAAGGCGGTCAGGGAGGACTGGAGGCAGAAATCCAAGCCCATCCCTCCT GGCGCCGTCTACCCTGCCAAGGACCACTGCAGCCGTTGTGGGCTCTGCGACACATACTAC GTTGCGCATGTCAAGACTGCCTGTGCCTTCCTGGGAGACGGCATGTCCCGTGTCGAGGAT CTTGAGCGACAAGTCCACGGGAGAGGCCGGAAGGAAGGCATGGATGAAATGTACTTTGGA GTCTATGACCAACTCTTGTATGCCAGGAAGACCGAACCTGTTGAAGGAGCCCAGTGGACG GGAATAGTGACAACAATCGCTGTCGAGATGCTGAAAGCAAACATGGTTGATGCTGTGGTT TGTGTACAAAGTGATCCTGACGACAGGCTTGCTCCAAGACCTGTTTTGGCCAGGACACCA GACGAAGTAATTGCAGCCAAAGGTGTGAAGCCAACATTATCACCAAATCTCAATACACTT GCCTTAGTCGAGGCAGCTGGTGTAAAGCGGCTTCTTTTCTGCGGTGTGGGCTGTCAAGTG CAAGCTTTGAGATCTGTAGAAAAGTACCTTGGTTTGGAAAAGCTTTATGTGCTTGGAACA AACTGTGTTGACAATGGTACGCGTGAAGGGCTTGATAAATTCTTGAAAGCGGCAAGCAGT GAGCCAGAAACTGTTATGCATTATGAATTTATGCAAGACTATAAGGTGCATCTAAAGCAT TTAGATGGGCACATTGAAGAGGTTCCTTATTTTTGCCTGCCAGCAAACGACCTGGTAGAT GTTATTGCACCGTCATGCTATAGCTGCTTTGACTACACAAATGGCTTGGCGGATTTAGTG GTGGGGTATATGGGAGTACCGAAATATGCTGGGGTCTCCATGACACAGCATCCTCAGTAC ATTACAGTCAGGAACGATCGTGGACAGGAGATGCTGAACCTGGTAGCTGGCCTTCTGGAA AGCACACCTACAATTAGCAGTGGCTCCAGGCAACCGTTTGTTATGGAGACAGTGAAAGCT GACGATGCCGCAAAACTGGGGAAAGGCCCTTCGAAACCAGCTCCTAGATTCGTCGGCGAC ATTCTGGCCTTCCTGCTGAACTTGGTTGGACCCAAGGGTCTGGAGTTCGCACGCTACTCT CTGGACTATCACACCATTCGGAATTATCTGCATGTTAGGCGGGCATGGGGAAAGCAAAGA GCTGAGCAGCACATCCCGGGGTATGCCAAGAAGATCGTGGAGGCCTACGACAAAGACGGA CGGATCGAGGCAATGGTTACGCAGTCAGGTGACTGA

Peptide Sequence

PEP ID	Zm00001d031860_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:1:204434031:204438702:1 gene:Zm00001d031860 transcript:Zm00001d031860_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:7-hydroxymethyl chlorophyll a reductase chloroplastic
Sequence	MASSTSLSLCLHASSPSSSSPGLRRPSLASSSSSRSERTRKIRAKAVREDWRQKSKPIPP GAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLERQVHGRGRKEGMDEMYFG VYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQSDPDDRLAPRPVLARTP DEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEKYLGLEKLYVLGT NCVDNGTREGLDKFLKAASSEPETVMHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVD VIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYITVRNDRGQEMLNLVAGLLE STPTISSGSRQPFVMETVKADDAAKLGKGPSKPAPRFVGDILAFLLNLVGPKGLEFARYS LDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGRIEAMVTQSGD

Transcript Sequence

Transcript ID	Zm00001d031860_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:204434031:204438702:1 gene:Zm00001d031860 gene_biotype:protein_coding transcript_biotype:protein_coding description:7-hydroxymethyl chlorophyll a reductase chloroplastic
Sequence	ACTCGATCCTCCGTCTTATCACCGGTGAGGTACTGAGGTGAGACGATCTCCGCCACCATG GCCTCCAGCACCTCCCTCTCCCTTTGCTTGCACGCCTCGTCGCCCTCGTCCTCGTCTCCT GGACTCCGCCGACCCTCCCTCGCCTCCTCCTCGTCCTCCAGGTCCGAGAGAACGCGCAAG ATCAGGGCCAAGGCGGTCAGGGAGGACTGGAGGCAGAAATCCAAGCCCATCCCTCCTGGC GCCGTCTACCCTGCCAAGGACCACTGCAGCCGTTGTGGGCTCTGCGACACATACTACGTT GCGCATGTCAAGACTGCCTGTGCCTTCCTGGGAGACGGCATGTCCCGTGTCGAGGATCTT GAGCGACAAGTCCACGGGAGAGGCCGGAAGGAAGGCATGGATGAAATGTACTTTGGAGTC TATGACCAACTCTTGTATGCCAGGAAGACCGAACCTGTTGAAGGAGCCCAGTGGACGGGA ATAGTGACAACAATCGCTGTCGAGATGCTGAAAGCAAACATGGTTGATGCTGTGGTTTGT GTACAAAGTGATCCTGACGACAGGCTTGCTCCAAGACCTGTTTTGGCCAGGACACCAGAC GAAGTAATTGCAGCCAAAGGTGTGAAGCCAACATTATCACCAAATCTCAATACACTTGCC TTAGTCGAGGCAGCTGGTGTAAAGCGGCTTCTTTTCTGCGGTGTGGGCTGTCAAGTGCAA GCTTTGAGATCTGTAGAAAAGTACCTTGGTTTGGAAAAGCTTTATGTGCTTGGAACAAAC TGTGTTGACAATGGTACGCGTGAAGGGCTTGATAAATTCTTGAAAGCGGCAAGCAGTGAG CCAGAAACTGTTATGCATTATGAATTTATGCAAGACTATAAGGTGCATCTAAAGCATTTA GATGGGCACATTGAAGAGGTTCCTTATTTTTGCCTGCCAGCAAACGACCTGGTAGATGTT ATTGCACCGTCATGCTATAGCTGCTTTGACTACACAAATGGCTTGGCGGATTTAGTGGTG GGGTATATGGGAGTACCGAAATATGCTGGGGTCTCCATGACACAGCATCCTCAGTACATT ACAGTCAGGAACGATCGTGGACAGGAGATGCTGAACCTGGTAGCTGGCCTTCTGGAAAGC ACACCTACAATTAGCAGTGGCTCCAGGCAACCGTTTGTTATGGAGACAGTGAAAGCTGAC GATGCCGCAAAACTGGGGAAAGGCCCTTCGAAACCAGCTCCTAGATTCGTCGGCGACATT CTGGCCTTCCTGCTGAACTTGGTTGGACCCAAGGGTCTGGAGTTCGCACGCTACTCTCTG GACTATCACACCATTCGGAATTATCTGCATGTTAGGCGGGCATGGGGAAAGCAAAGAGCT GAGCAGCACATCCCGGGGTATGCCAAGAAGATCGTGGAGGCCTACGACAAAGACGGACGG ATCGAGGCAATGGTTACGCAGTCAGGTGACTGACTCACACCATTCACACTCTACTAGCTG GTAGTATTTGTATACTAGCTGGTAGTATTTGTACTGCATTGTAGTAAAGATTAAGGAATG TAGAAGAATTGTTTGTGATGTGACGTAGTGGCGATGTATACAGTAGAATGTATAGGCTGC ATGGCAGCAGCTCAGATCTGTATGTACATCCTGCGCTTGCCAGTTTCTAGTTTGCATTTG CTTTTCTGG