Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031794_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:202093618:202095506:1 gene:Zm00001d031794 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-amylase 1
Sequence

ATGATGAAGCACTCGAGCAGCTTGTGCTTGCTCTTCCTCTTGGCGCTCTGCACCACCCTG
CTGGCCTGCGGCCTGGTCCAGGCACAAGTCCTCTTCCAGGGGTTTAACTGGGAGTCGTGC
AAGCAGCAGGGAGGCTGGTACAACAGGCTCAAGGCCCAGGTCGACGACATCGCCAAGGCC
GGCGTCACGCACGTCTGGCTGCCTCCACCCTCGCACTCCGTCTCGCCACAAGGCTACATG
CCAGGCCGCCTATACGACCTGGACGCGTCCAAGTACGGCACGGCGGCGGAGCTCAAGTCC
CTGATAGCGGCGTTCCACGGCAGGGGCGTGCAGTGCGTGGCGGACATCGTCATCAACCAC
CGGTGCGCGGAAAAGAAGGACGCGCGCGGCGTGTACTGCATCTTCGAGGGCGGGACTCCC
GACGACCGCCTGGACTGGGGCCCCGGGATGATCTGCAGCGACGACACGCAGTACTCGGAC
GGGACGGGGCACCGCGACACGGGCGAGGGGTTCGCGGCGGCGCCCGACATCGACCACCTC
AACCCGCGCGTGCAGCGGGAGCTCTCCGCCTGGCTCAACTGGCTCAGGTCCGACGCCGTG
GGGTTCGACGGCTGGCGCCTCGACTTCGCCAAGGGCTACTCGCCGGCCGTCGCCAGAATG
TACGTGGAGAGCACGGGGCCGCCGAGCTTCGTCGTCGCGGAGATATGGAACTCGCTGAGC
TACAGCGGGGACGGCAAGCCGGCGCCCAACCAGGACCAGTGCCGGCAGGAGCTGCTGGAC
TGGACGCGGGCCGTCGGCGGGCCCGCCATGGCGTTCGACTTCCCCACCAAGGGCCTGCTG
CAGGCGGGCGTGCAGGGGGAGCTGTGGCGGCTGCGCGACAGCTCCGGCAACGCGGCCGGC
CTGATCGGGTGGGCGCCCGAGAAGGCCGTCACCTTCGTCGACAACCATGACACCGGGTCG
ACGCAGAAGCTCTGGCCGTTCCCATCCGACAAGGTCATGCAGGGCTACGCCTACATCCTC
ACCCATCCAGGAGTCCCCTGCATTTTCTACGACCACATGTTCGACTGGAACCTGAAGCAG
GAGATATCCACGCTGTCTGCCATCAGGGCGCGGAACGGCATCCGCGCCGGGAGCAAGCTG
CGGATCCTCGTGGCGGACGCGGACGCGTACGTGGCCGTCGTCGACGAGAAGGTCATGGTG
AAGATCGGGACAAGGTACGGCGTGAGCAGCGTGGTCCCGTCGGATTTCCACCCGGCGGCG
CACGGCAAGGACTACTGCGTCTGGGAGAAAGCGAGCCTCCGCGTCCCGGCGGGGCGCCAC
CTCTAG

Peptide Sequence

PEP ID

Zm00001d031794_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:202093618:202095506:1 gene:Zm00001d031794 transcript:Zm00001d031794_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-amylase 1
Sequence

MMKHSSSLCLLFLLALCTTLLACGLVQAQVLFQGFNWESCKQQGGWYNRLKAQVDDIAKA
GVTHVWLPPPSHSVSPQGYMPGRLYDLDASKYGTAAELKSLIAAFHGRGVQCVADIVINH
RCAEKKDARGVYCIFEGGTPDDRLDWGPGMICSDDTQYSDGTGHRDTGEGFAAAPDIDHL
NPRVQRELSAWLNWLRSDAVGFDGWRLDFAKGYSPAVARMYVESTGPPSFVVAEIWNSLS
YSGDGKPAPNQDQCRQELLDWTRAVGGPAMAFDFPTKGLLQAGVQGELWRLRDSSGNAAG
LIGWAPEKAVTFVDNHDTGSTQKLWPFPSDKVMQGYAYILTHPGVPCIFYDHMFDWNLKQ
EISTLSAIRARNGIRAGSKLRILVADADAYVAVVDEKVMVKIGTRYGVSSVVPSDFHPAA
HGKDYCVWEKASLRVPAGRHL

Transcript Sequence

Transcript ID

Zm00001d031794_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:202093618:202095506:1 gene:Zm00001d031794 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-amylase 1
Sequence

CTCTGAGATAAGTGAAGCATCTCGCGCACTGTCGCAGTCGCAGACGGAGATGATGAAGCA
CTCGAGCAGCTTGTGCTTGCTCTTCCTCTTGGCGCTCTGCACCACCCTGCTGGCCTGCGG
CCTGGTCCAGGCACAAGTCCTCTTCCAGGGGTTTAACTGGGAGTCGTGCAAGCAGCAGGG
AGGCTGGTACAACAGGCTCAAGGCCCAGGTCGACGACATCGCCAAGGCCGGCGTCACGCA
CGTCTGGCTGCCTCCACCCTCGCACTCCGTCTCGCCACAAGGCTACATGCCAGGCCGCCT
ATACGACCTGGACGCGTCCAAGTACGGCACGGCGGCGGAGCTCAAGTCCCTGATAGCGGC
GTTCCACGGCAGGGGCGTGCAGTGCGTGGCGGACATCGTCATCAACCACCGGTGCGCGGA
AAAGAAGGACGCGCGCGGCGTGTACTGCATCTTCGAGGGCGGGACTCCCGACGACCGCCT
GGACTGGGGCCCCGGGATGATCTGCAGCGACGACACGCAGTACTCGGACGGGACGGGGCA
CCGCGACACGGGCGAGGGGTTCGCGGCGGCGCCCGACATCGACCACCTCAACCCGCGCGT
GCAGCGGGAGCTCTCCGCCTGGCTCAACTGGCTCAGGTCCGACGCCGTGGGGTTCGACGG
CTGGCGCCTCGACTTCGCCAAGGGCTACTCGCCGGCCGTCGCCAGAATGTACGTGGAGAG
CACGGGGCCGCCGAGCTTCGTCGTCGCGGAGATATGGAACTCGCTGAGCTACAGCGGGGA
CGGCAAGCCGGCGCCCAACCAGGACCAGTGCCGGCAGGAGCTGCTGGACTGGACGCGGGC
CGTCGGCGGGCCCGCCATGGCGTTCGACTTCCCCACCAAGGGCCTGCTGCAGGCGGGCGT
GCAGGGGGAGCTGTGGCGGCTGCGCGACAGCTCCGGCAACGCGGCCGGCCTGATCGGGTG
GGCGCCCGAGAAGGCCGTCACCTTCGTCGACAACCATGACACCGGGTCGACGCAGAAGCT
CTGGCCGTTCCCATCCGACAAGGTCATGCAGGGCTACGCCTACATCCTCACCCATCCAGG
AGTCCCCTGCATTTTCTACGACCACATGTTCGACTGGAACCTGAAGCAGGAGATATCCAC
GCTGTCTGCCATCAGGGCGCGGAACGGCATCCGCGCCGGGAGCAAGCTGCGGATCCTCGT
GGCGGACGCGGACGCGTACGTGGCCGTCGTCGACGAGAAGGTCATGGTGAAGATCGGGAC
AAGGTACGGCGTGAGCAGCGTGGTCCCGTCGGATTTCCACCCGGCGGCGCACGGCAAGGA
CTACTGCGTCTGGGAGAAAGCGAGCCTCCGCGTCCCGGCGGGGCGCCACCTCTAGCAGCT
CAGATTGCTCAGTCTTGTGCTGCATTGCAAACACAGCAGCACGACACTGCATAACGTCTT
TTCCTTAATTTCCTGAATTTTACCTTTTCCTAGTTCAATTTCATATATGTATTTCTACAT
GTACACACTATCACAATCAGATAAATAAACAAGCTTGGTCACCTGAAAG