Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031759_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:200944200:200947414:1 gene:Zm00001d031759 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SHOOT GRAVITROPISM 5
Sequence	ATGTTGAGTTCTTGCGCGCCAACGACGGCCTTTCCGCCCCCAGAGGCGGGGGCCGCCGCG CCACCGGAGCCGTTCCGGTCTCTGCAGATCGCCACGACCACCAGCGCCGCCGGGGCCAAG AAGAAGCGGCGTCCCGCCGGCACTCCTGACCCCGACGCGGAGGTGGTGTCGCTGTCGCCG CGGACGCTGCTGGAGTCGGACCGGTACGTGTGCGAGATCTGCGGGCAGGGGTTCCAGCGC GACCAGAACCTGCAGATGCACCGGCGGCGGCACAAGGTGCCGTGGAAGCTGCTGAAGCGG GAGGCCGGGGAGGCGGCGCGGAAGCGCGTGTTCGTGTGCCCGGAGCCGAGCTGCCTGCAC CACGACCCCTCGCACGCGCTGGGCGACCTCGTCGGCATCAAGAAGCACTTCCGCCGCAAG CACAGCGGCCACCGCCAGTGGGCCTGCGCCCGCTGCTCCAAGGCCTACGCCGTCCACTCC GACTACAAGGCCCACCTCAAGACCTGCGGCACCCGCGGCCACACCTGCGACTGCGGCCGC GTCTTCTCCCGGGTGGAGAGCTTTATCGAGCACCAGGACACGTGCAACGCCGGCCGGACG CGGGCCGAGACGTCGTCGTCCCCGGCTAGTGGTGGTGGCTACGGCGGCGGCACCGGCGCC GGGTTCTGCGTGGCCGCAGCTGCCTCCACGTCCCAGCAACGTCACCTGCATGCCGCCGCC GCCGCGGCGGCGGCGTTGTCTCGGACGGCGTCTAGTGCGAGCCCATCAAGCGGCGGCGAG TTTGGGGTGAGCCAGCAGGTCGCCTGCTGGCCTGGTCCGGCGATGGCGAGCCCCACGGCC GCCGCGACGTTCCACAGGTTCGACCAGGCTCTGTCGCCTCCGACGCCGCACGAGCGTCCT GGAGGCATCCACAACCTGGAGCTCCAGCTCATGCCGCCGCGCGGCAGCGCCGCCAGCTAC TACGAGGGGGCTGCAGGTGCAGCTCCTGCAGCTGCCGTCAGGTGCTGCGCCTCGCCGCAT TATTCGCCTGCTGTACATGTTCCGCAGCCGGGCGCCGACCCGATGCGGCTGCAGCTGTCG ATCGGGTTCGGCGGCGGCGACGGCGAGACGTCGGCGCCGGCAGCGGCGGCGAGGCTGAAG GAGGAGGCCCGGGAGCAGCTGCGGCTGGCGATGGCGGAGAAGGCGGCGGCCGACGACGCC CGGGCGCAGGCGCGGCGGCAGGCGGAGCTGGCCGAGCAGGAGCTGGCGGCCGCCCGGCGC ATGCGGCAGCAGGCGCAGGCGGAGCTGGGCCGCGCGCACGCGCTCCGGGACCACGCCGTG CGGCAGGTGGACGCCACGCTGCTGCAGGTCACCTGCTACAGCTGCCGCTGCAAGTTCCGG GCGCGTGTGACTGGCGGCGGCGCCATGAGCTCCGAGGTGGCCAGCTACGTCTCCTCCGTT GTCACGGCCGAGGGCGGCGACGCCGAGGTGGACGACGACGACCCGTACCGCCACCACCGG CAGCTCACCGCCGACGACGACGCGCCGAGCCACGCTAGGATGATGGACATCAACTAG

Peptide Sequence

PEP ID	Zm00001d031759_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:200944200:200947414:1 gene:Zm00001d031759 transcript:Zm00001d031759_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SHOOT GRAVITROPISM 5
Sequence	MLSSCAPTTAFPPPEAGAAAPPEPFRSLQIATTTSAAGAKKKRRPAGTPDPDAEVVSLSP RTLLESDRYVCEICGQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPSCLH HDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTCGTRGHTCDCGR VFSRVESFIEHQDTCNAGRTRAETSSSPASGGGYGGGTGAGFCVAAAASTSQQRHLHAAA AAAAALSRTASSASPSSGGEFGVSQQVACWPGPAMASPTAAATFHRFDQALSPPTPHERP GGIHNLELQLMPPRGSAASYYEGAAGAAPAAAVRCCASPHYSPAVHVPQPGADPMRLQLS IGFGGGDGETSAPAAAARLKEEAREQLRLAMAEKAAADDARAQARRQAELAEQELAAARR MRQQAQAELGRAHALRDHAVRQVDATLLQVTCYSCRCKFRARVTGGGAMSSEVASYVSSV VTAEGGDAEVDDDDPYRHHRQLTADDDAPSHARMMDIN

Transcript Sequence

Transcript ID	Zm00001d031759_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:200944200:200947414:1 gene:Zm00001d031759 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SHOOT GRAVITROPISM 5
Sequence	TCTCTCTCTCTCCTCTCCCCTCTCCTCGCCCTCTCTCTCTCTCTCAAATTCATTCCTAGC TGTACCCACATCTCTCTCCCCCGGCCCTTTTGTTTTGTTTATTCACAACTCTCCTCCGTC CTCGCTCTCATCTGGTCCGCACTCCGGAGGAGTGATTTACCTCCCCCTCCGGCCTCCAAT CTTATATAGAGATGCCTCAATTCCATTGCCCCATTCCCATCGCCTGACCTCCAGCTCCAG GCTTTTGAATTGTGATCGTGAGAGCAAGTAGAACACGGAGAGATTTGTTTGCACAGTTGC AGGAGAGAGGATATATACAGGGAGTCGGTTCTTTGGTTTGCTGATTTGCTTGGGGTGGCA TTTTGTTACCCAACCAAAGACTGATCTAGCGAGAAGGAGAGGCACACAAGTGACGGCAGT GCCGTGCGCGCGGCGCCACCCCCACCACACCATGTTGAGTTCTTGCGCGCCAACGACGGC CTTTCCGCCCCCAGAGGCGGGGGCCGCCGCGCCACCGGAGCCGTTCCGGTCTCTGCAGAT CGCCACGACCACCAGCGCCGCCGGGGCCAAGAAGAAGCGGCGTCCCGCCGGCACTCCTGA CCCCGACGCGGAGGTGGTGTCGCTGTCGCCGCGGACGCTGCTGGAGTCGGACCGGTACGT GTGCGAGATCTGCGGGCAGGGGTTCCAGCGCGACCAGAACCTGCAGATGCACCGGCGGCG GCACAAGGTGCCGTGGAAGCTGCTGAAGCGGGAGGCCGGGGAGGCGGCGCGGAAGCGCGT GTTCGTGTGCCCGGAGCCGAGCTGCCTGCACCACGACCCCTCGCACGCGCTGGGCGACCT CGTCGGCATCAAGAAGCACTTCCGCCGCAAGCACAGCGGCCACCGCCAGTGGGCCTGCGC CCGCTGCTCCAAGGCCTACGCCGTCCACTCCGACTACAAGGCCCACCTCAAGACCTGCGG CACCCGCGGCCACACCTGCGACTGCGGCCGCGTCTTCTCCCGGGTGGAGAGCTTTATCGA GCACCAGGACACGTGCAACGCCGGCCGGACGCGGGCCGAGACGTCGTCGTCCCCGGCTAG TGGTGGTGGCTACGGCGGCGGCACCGGCGCCGGGTTCTGCGTGGCCGCAGCTGCCTCCAC GTCCCAGCAACGTCACCTGCATGCCGCCGCCGCCGCGGCGGCGGCGTTGTCTCGGACGGC GTCTAGTGCGAGCCCATCAAGCGGCGGCGAGTTTGGGGTGAGCCAGCAGGTCGCCTGCTG GCCTGGTCCGGCGATGGCGAGCCCCACGGCCGCCGCGACGTTCCACAGGTTCGACCAGGC TCTGTCGCCTCCGACGCCGCACGAGCGTCCTGGAGGCATCCACAACCTGGAGCTCCAGCT CATGCCGCCGCGCGGCAGCGCCGCCAGCTACTACGAGGGGGCTGCAGGTGCAGCTCCTGC AGCTGCCGTCAGGTGCTGCGCCTCGCCGCATTATTCGCCTGCTGTACATGTTCCGCAGCC GGGCGCCGACCCGATGCGGCTGCAGCTGTCGATCGGGTTCGGCGGCGGCGACGGCGAGAC GTCGGCGCCGGCAGCGGCGGCGAGGCTGAAGGAGGAGGCCCGGGAGCAGCTGCGGCTGGC GATGGCGGAGAAGGCGGCGGCCGACGACGCCCGGGCGCAGGCGCGGCGGCAGGCGGAGCT GGCCGAGCAGGAGCTGGCGGCCGCCCGGCGCATGCGGCAGCAGGCGCAGGCGGAGCTGGG CCGCGCGCACGCGCTCCGGGACCACGCCGTGCGGCAGGTGGACGCCACGCTGCTGCAGGT CACCTGCTACAGCTGCCGCTGCAAGTTCCGGGCGCGTGTGACTGGCGGCGGCGCCATGAG CTCCGAGGTGGCCAGCTACGTCTCCTCCGTTGTCACGGCCGAGGGCGGCGACGCCGAGGT GGACGACGACGACCCGTACCGCCACCACCGGCAGCTCACCGCCGACGACGACGCGCCGAG CCACGCTAGGATGATGGACATCAACTAG