Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031712_T024
CDS Infomation

cds chromosome:B73_RefGen_v4:1:199133705:199139503:-1 gene:Zm00001d031712 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCCCGCGGGCGCGCGCAAGGAGTGGCGCGCCGTCCCCGGCTCCTCGCTCCGCTCC
AATGGCGCCGAGGATGCCGCGGAGCACGGGAAGCTGGGGCAGTCGGAGGACCGAGCTATC
TACGAGGAAGGGGCGGGTGGACTGGAGGACTTCTGCGCCATCACCATTGATGGGAGCGGA
GGGCTCAGCGAGGACATCCTGCAGCAGCGCCTGCAGAGCGTTGTGCGGCAAAGGGAGCAG
CTGCAGCAGGTCGAGATGGAGCTGCGTGCGCAGGCCATTGCACACCCGCAGATCATTCAG
GCGCAACAAAGCTTCCAGGCTACTTCCAAGGAACATGCCGCAGCTGTGGCCAAGATCAAG
GAGCAACTGCATGAGCGGGAGCAATACATTCTTGAACTAGAAATGAAACTCAATGACAAG
GATAGAGAACTAAATGCTCTGAAGATTGATCATCAAACGGTGTGGGCAAATCAAGATCTT
ATTAGAGAACAGACCAAAGAGCTGGCAACTGTCAGAAGGGAACGCGACAACTCTGAAGCT
GAAAGAGCCCAACATCTTACACAAATTCATGAGCTCCAAGAACATCTGCGAGAAAAAGAA
AGCCAGTTCATTGCATTAGAGGAACAGCATAGGGCTGCTCAAGACAACATTCTTTACAAA
GATGAGCAGTTGAGGGAAGCCCATGCTTGGGTATCTCAAGTTCGAGAAATGGATGCTTTG
CAGTCTCAATCCCTACAAGTTGAGTTACGTGAGCGCATGGAGCAATTTAATCAATATTGG
ATTAGCTCCCAGCAGCAGTATGCTGAAATGCAGCGGAGTCTTCTCCATACAATACAACAA
CTCCAGCAAGAATTAACTGAGGCAAGGGAACAGTCTGGTGCACAAAAAGATGGTCCACAA
GTTTCTCGGGAAGGGTCAGCTGAATCATCACTAGTTCAAAGCATGGGAAACAGCGTGGCT
TCAAATGGTAGTGCAACTGCAGATGGGAACCAGCAATTGTTGAAAAATAATGGAAGCGTG
GATGTCTCTGTTCAGGCCAATAGTGCCTCAGCTGTACCTGTTCCTTCTTCCCTACTGGGA
ATCGGTGGTCCGGCTGCGCATATCGCTGCGATGCATGCTTTTATGATTCATCCTCAAGGC
ATTCCTCAACCCTTAGTAGCATCACCCAACTCTGGTGTTCCTCAATTTGGCAGTTTTCAG
TCTCAGTCTACAATTCAACCAAATTCACAATGGCCAAATCAGCAGGAAGTACAAAATGTC
TCACAACCACAAGATGAAACAAACTATCAGACATCCCAATCAGACCGGACTGTTTTACAA
CAAGGCGCTATTAATACTGATGAGTTGTCCTCAAAGCCAAGCCAGGATAGTCAGCCAGAC
CATCTTAATGCCCATGTGAAACAACAGCAGAGCCCTGCAAGTGCACCTACTGAATCAACT
CATGAACTTACTGTTGTTGAAGCGAATGTAGCTGAACATGTATCTTGTGACGAACAACAA
AAAATCTTAAACGAACAGGATTCACTGTCAAATATGAACAACCATATTGGAATAGTTGAG
CATCTAGAGCAAAATACCGAATCCAAGGATGAAAGAGCTGCATCTGATAAGCAACCTGAA
CCTGTATCTAGGCAGCATAAACATTTGAACTTTCCTCCGTTCACTACCCAGATTCACTTG
AAAAAGAGTGCAACAGAGAATCCTAATGTTGTAAATCAGGTTGATATAATGAAATCAGTT
GCAGGTGGTTTTAGTTCGCAGTTACCTCGTGCACCAAAGGAACCTTCTCTCCTAGATGAG
AGATCTCTATTGGCTTGCATTGTACGTGCAGTTCCTGCTGGGACTGAGGGTGGAATCAGG
ATAAGTTCAACTCTGCCAAATAGGCTTGGGAAAATGTTGGCTCCCCTTCACTGGCATGAC
TATAAGAAGCAATACGGGAAGCTCGACGATTTTGTGGCTAGTCATCCAGAGCTGTTTGTG
ATTGAGGGAGACTTCATTCACCTTCGTGATGGAGCACAGCAGATTATTTCTGCCACTACA
GCTGCTGCAAAAATAGCTGCTGCGACAGCATCTTCTGCCTCTTACTCATCCTTACTGCCT
TCTGTTGCCGTTACTCCTGTGGCACAAAATACTCGGCAAAAGAGGAGGCCCGCAGTTGAT
TCCAGATCATCAAATGCAATTCCCTCTGGAAACGGCTTCACAGATCAATTTAACATCATT
CAGGGTGTCAGCGACGTAACAATTTCA

Peptide Sequence

PEP ID

Zm00001d031712_P024
PEP Infomation

pep chromosome:B73_RefGen_v4:1:199133705:199139503:-1 gene:Zm00001d031712 transcript:Zm00001d031712_T024 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEPAGARKEWRAVPGSSLRSNGAEDAAEHGKLGQSEDRAIYEEGAGGLEDFCAITIDGSG
GLSEDILQQRLQSVVRQREQLQQVEMELRAQAIAHPQIIQAQQSFQATSKEHAAAVAKIK
EQLHEREQYILELEMKLNDKDRELNALKIDHQTVWANQDLIREQTKELATVRRERDNSEA
ERAQHLTQIHELQEHLREKESQFIALEEQHRAAQDNILYKDEQLREAHAWVSQVREMDAL
QSQSLQVELRERMEQFNQYWISSQQQYAEMQRSLLHTIQQLQQELTEAREQSGAQKDGPQ
VSREGSAESSLVQSMGNSVASNGSATADGNQQLLKNNGSVDVSVQANSASAVPVPSSLLG
IGGPAAHIAAMHAFMIHPQGIPQPLVASPNSGVPQFGSFQSQSTIQPNSQWPNQQEVQNV
SQPQDETNYQTSQSDRTVLQQGAINTDELSSKPSQDSQPDHLNAHVKQQQSPASAPTEST
HELTVVEANVAEHVSCDEQQKILNEQDSLSNMNNHIGIVEHLEQNTESKDERAASDKQPE
PVSRQHKHLNFPPFTTQIHLKKSATENPNVVNQVDIMKSVAGGFSSQLPRAPKEPSLLDE
RSLLACIVRAVPAGTEGGIRISSTLPNRLGKMLAPLHWHDYKKQYGKLDDFVASHPELFV
IEGDFIHLRDGAQQIISATTAAAKIAAATASSASYSSLLPSVAVTPVAQNTRQKRRPAVD
SRSSNAIPSGNGFTDQFNIIQGVSDVTIS

Transcript Sequence

Transcript ID

Zm00001d031712_T024
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:199133705:199139503:-1 gene:Zm00001d031712 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCACGCTCCGGTCAGCCTCGCCTCCTTTCTCCGTCTCATTCCCCCAATCCCACGCCAGT
CCCGCAGGAATCCCCACCCAAATTCCCGTCTCCCCGATCGCCGCCCTTCTCGGTGCCCGT
AAACCCTACCCCCGGAGTCGCCCGTGCGCTGTCGTGCCCGCGTTGCCACCGTCGGTGGTC
CGCGGCGCCCGTAACCAAAACCTAACCGCAGCCTGCAGATCCCGATTCCGCAGGGAGGCG
GGAGAGGTGAAGGCCGCCTCGCCGCAGATGGAGCCCGCGGGCGCGCGCAAGGAGTGGCGC
GCCGTCCCCGGCTCCTCGCTCCGCTCCAATGGCGCCGAGGATGCCGCGGAGCACGGGAAG
CTGGGGCAGTCGGAGGACCGAGCTATCTACGAGGAAGGGGCGGGTGGACTGGAGGACTTC
TGCGCCATCACCATTGATGGGAGCGGAGGGCTCAGCGAGGACATCCTGCAGCAGCGCCTG
CAGAGCGTTGTGCGGCAAAGGGAGCAGCTGCAGCAGGTCGAGATGGAGCTGCGTGCGCAG
GCCATTGCACACCCGCAGATCATTCAGGCGCAACAAAGCTTCCAGGCTACTTCCAAGGAA
CATGCCGCAGCTGTGGCCAAGATCAAGGAGCAACTGCATGAGCGGGAGCAATACATTCTT
GAACTAGAAATGAAACTCAATGACAAGGATAGAGAACTAAATGCTCTGAAGATTGATCAT
CAAACGGTGTGGGCAAATCAAGATCTTATTAGAGAACAGACCAAAGAGCTGGCAACTGTC
AGAAGGGAACGCGACAACTCTGAAGCTGAAAGAGCCCAACATCTTACACAAATTCATGAG
CTCCAAGAACATCTGCGAGAAAAAGAAAGCCAGTTCATTGCATTAGAGGAACAGCATAGG
GCTGCTCAAGACAACATTCTTTACAAAGATGAGCAGTTGAGGGAAGCCCATGCTTGGGTA
TCTCAAGTTCGAGAAATGGATGCTTTGCAGTCTCAATCCCTACAAGTTGAGTTACGTGAG
CGCATGGAGCAATTTAATCAATATTGGATTAGCTCCCAGCAGCAGTATGCTGAAATGCAG
CGGAGTCTTCTCCATACAATACAACAACTCCAGCAAGAATTAACTGAGGCAAGGGAACAG
TCTGGTGCACAAAAAGATGGTCCACAAGTTTCTCGGGAAGGGTCAGCTGAATCATCACTA
GTTCAAAGCATGGGAAACAGCGTGGCTTCAAATGGTAGTGCAACTGCAGATGGGAACCAG
CAATTGTTGAAAAATAATGGAAGCGTGGATGTCTCTGTTCAGGCCAATAGTGCCTCAGCT
GTACCTGTTCCTTCTTCCCTACTGGGAATCGGTGGTCCGGCTGCGCATATCGCTGCGATG
CATGCTTTTATGATTCATCCTCAAGGCATTCCTCAACCCTTAGTAGCATCACCCAACTCT
GGTGTTCCTCAATTTGGCAGTTTTCAGTCTCAGTCTACAATTCAACCAAATTCACAATGG
CCAAATCAGCAGGAAGTACAAAATGTCTCACAACCACAAGATGAAACAAACTATCAGACA
TCCCAATCAGACCGGACTGTTTTACAACAAGGCGCTATTAATACTGATGAGTTGTCCTCA
AAGCCAAGCCAGGATAGTCAGCCAGACCATCTTAATGCCCATGTGAAACAACAGCAGAGC
CCTGCAAGTGCACCTACTGAATCAACTCATGAACTTACTGTTGTTGAAGCGAATGTAGCT
GAACATGTATCTTGTGACGAACAACAAAAAATCTTAAACGAACAGGATTCACTGTCAAAT
ATGAACAACCATATTGGAATAGTTGAGCATCTAGAGCAAAATACCGAATCCAAGGATGAA
AGAGCTGCATCTGATAAGCAACCTGAACCTGTATCTAGGCAGCATAAACATTTGAACTTT
CCTCCGTTCACTACCCAGATTCACTTGAAAAAGAGTGCAACAGAGAATCCTAATGTTGTA
AATCAGGTTGATATAATGAAATCAGTTGCAGGTGGTTTTAGTTCGCAGTTACCTCGTGCA
CCAAAGGAACCTTCTCTCCTAGATGAGAGATCTCTATTGGCTTGCATTGTACGTGCAGTT
CCTGCTGGGACTGAGGGTGGAATCAGGATAAGTTCAACTCTGCCAAATAGGCTTGGGAAA
ATGTTGGCTCCCCTTCACTGGCATGACTATAAGAAGCAATACGGGAAGCTCGACGATTTT
GTGGCTAGTCATCCAGAGCTGTTTGTGATTGAGGGAGACTTCATTCACCTTCGTGATGGA
GCACAGCAGATTATTTCTGCCACTACAGCTGCTGCAAAAATAGCTGCTGCGACAGCATCT
TCTGCCTCTTACTCATCCTTACTGCCTTCTGTTGCCGTTACTCCTGTGGCACAAAATACT
CGGCAAAAGAGGAGGCCCGCAGTTGATTCCAGATCATCAAATGCAATTCCCTCTGGAAAC
GGCTTCACAGATCAATTTAACATCATTCAGGGTGTCAGCGACGTAACAATTTCAG